Cygnus atratus (black swan): 118246292
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Entry
118246292 CDS
T09349
Symbol
NUP93
Name
(RefSeq) nuclear pore complex protein Nup93 isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118246292 (NUP93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cata03019
]
118246292 (NUP93)
Messenger RNA biogenesis [BR:
cata03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118246292 (NUP93)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
118246292
NCBI-ProteinID:
XP_035399147
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Position
12:complement(13437028..13519884)
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AA seq
846 aa
AA seq
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MGARGGDARRPARRAGFCASRVKPATEMDTEGFGELLQQAEQLAAETEGISELPHVERNL
PEIQQAGERLRSRTLTRTSQETADVKASVLLGSRGLDISYISQRLESLSAATTFEPLEPV
KDTDIQGFLKNEKDNALLSAIEESRKRTFAMAEEYHRESMLVEWEQVKQRILHTLLASGE
DALDFTQENEPSYAGESGPPGRSSLDSVEMAYARQIYIYNEKIVNGHLQPNLVDLCAAVV
ELDDKNISDLWAMVKQMIDIRLVSASDVLKVRTNLEVRMDFVRQALHYLEQSYKNYTFMT
VFGNLHQAQLGGVPGTYQLVRSYLNIKLPAPVPGLQDGEVEGHPVWALIYYCMRCGDLNA
AMHVVKRAQHQLGEFKTWFQEYMHSKDRRLSAATENKLRLHYRRALRNNTDPYKRAVYCI
IGRCDVTDNQSEVADKTEDYLWLKLNQVCFDDDGASSPQDRLTLSQFQKQLLEDYGESHF
AVNHQPFLYFQVLFLTAQFEAAIAFLFRTERLRCHAVHVALVLFELKLLLKSSGQSAQLL
SHEAGDPPAVRRLNFVRLLMLYTRKFESTDPREALQYFYFLRNEKDSQGENMFLRCVSEL
VIESREFDMILGKLENDGSRKPGVIDKFNSDTKPIINKVASAAENKGLFEEAAKLYDLAK
NPDKVLELMNKLLSPVVPQISTPQSNKERLKNMAHSIAERYKAQGISAKKSIDSTFYLLL
DLIMFFDEYHAGHIDRAFDIIERLKLVPLSQDCVEERVAAFRNFSDEIRHNLSEVLLATM
NILFTQYKRMKGTSPATPARPQRVMEDRDSQLRSQARALITFAGMIPYRTSGDTNARLVQ
MEVLMN
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgcggggcggggacgcgcggcggccggcgcggcgggcaggtttctgtgcgtct
cgggtgaaacctgcaacagagatggacaccgaaggctttggagagctcctgcagcaggca
gagcagctcgcagctgagacagagggcatctccgagctcccacatgtggagcgcaacctg
ccagagatccagcaggctggggagcgtctgcgctcccgcactctgacccgcacttcccag
gagactgcggacgttaaggcgtctgttcttcttgggtccagagggcttgatatatcttat
atctctcagcgactcgagagtctaagtgcagccactacatttgagcctcttgaacccgtg
aaggacactgacatccagggattcctgaagaatgaaaaagataatgccttgctgtcagct
attgaagagtccaggaaaaggacctttgctatggctgaggagtatcaccgagaatcaatg
ctggttgaatgggaacaggtgaagcaaaggattcttcataccctgctggcatcgggggaa
gatgctctcgatttcacccaggaaaacgagcccagctatgctggtgagtcgggccctcca
ggtcgcagctcgctggacagcgtggagatggcatatgctcggcagatttatatttataac
gagaagatagtgaacggacatctgcagcctaacctggtggacctttgtgctgctgttgta
gagttggatgataagaacatctctgacttgtgggccatggtgaaacaaatgatcgacatt
cgcctggtttctgctagcgacgtcttgaaagtccggaccaacttggaggtgcgcatggac
ttcgtgaggcaggctctgcactacctcgaacaaagttacaaaaattacaccttcatgact
gtctttggaaacctgcaccaggctcagctgggtggagttccagggacctaccagctggtc
cgcagttacctgaacatcaaactgcctgcgcctgtccctggtctccaggatggtgaggtg
gaaggccaccctgtctgggcactgatctactactgcatgcgctgcggagatctgaatgcg
gccatgcatgtggtgaaacgggcacagcaccagctgggagagtttaaaacctggtttcag
gaatacatgcacagtaaagatagaagattatctgctgccacagaaaataagctacgtctc
cattacagacgagctctgaggaacaacactgacccgtataagagggctgtttattgtatt
attggccgttgtgacgttacagataaccagagtgaagttgctgataaaacggaagattat
ctttggctaaaactgaaccaagtgtgttttgatgacgatggtgcaagctctccgcaagac
cgattaacattatcacagttccagaagcagctgctagaggactatggtgaatcacatttt
gcagtgaaccaccagcctttcctctacttccaagtattgttcttgacagcacagttcgaa
gctgcgattgcttttctatttcggacagagcgtttgcgttgtcatgctgttcatgttgct
ttggtcctgtttgagttaaaattgctcctgaaatcttctgggcagagcgcacagctatta
agccatgaggctggtgaccctcccgctgttaggcgtctcaattttgtgcggcttctgatg
ctttatacccggaaatttgaatcaactgatccaagagaagccctgcagtatttttacttt
ctcaggaacgagaaggacagccaaggagagaatatgttcttgcgttgtgttagcgaacta
gtaatcgaaagcagagagtttgacatgattcttggaaagctggaaaatgatggtagtaga
aagccgggagtgatagacaagtttaatagtgacacaaaacctatcattaacaaagtggct
tctgcagcagaaaataaaggattgtttgaagaagctgcaaaactatatgaccttgcaaag
aaccccgacaaagttttagaactgatgaacaagctcctcagccccgtcgttccccagatc
agcactccccagtcgaacaaagagcggttgaagaacatggcccattcgattgcggagagg
tacaaagctcaggggataagtgcgaagaaatccattgactccacgttctaccttctgcta
gacttaatcatgttttttgatgaatatcatgccggtcacattgatagggcctttgatatt
atcgaacgcctaaagcttgtacctcttagccaagattgcgtggaggagagagttgcagcc
ttccggaatttcagtgacgaaatcaggcacaatttatccgaggtcctgcttgcaaccatg
aatattttgttcacccagtataagcggatgaaaggcacaagccctgccactcctgccaga
ccccagcgcgtaatggaagacagagattcgcaacttcgatctcaagctcgtgcactgata
acgtttgctggaatgatcccttacagaacgtctggagacacaaatgcaagactggtgcaa
atggaggtccttatgaactag
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