Cygnus atratus (black swan): 118246346 Help Entry 118246346         CDS       T09349                                  Symbol NLRC5 Name (RefSeq) protein NLRC5 isoform X1   KO K22615   NLR family CARD domain containing 5 Organism cata  Cygnus atratus (black swan) Brite KEGG Orthology (KO) [BR:cata00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04054 Pattern recognition receptors [BR:cata04054]     118246346 (NLRC5) Pattern recognition receptors [BR:cata04054]  Cytoplasmic pattern recognition receptors   NOD-like receptors    118246346 (NLRC5) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LRR_6 NACHT Atypical_Card NLRC4_HD2 LRR_4 NPHP3_N LRR_8 AAA NOD2_WH AAA_16 AAA_22 AAA_25 RNA_helicase NB-ARC bpMoxR ATPase_2 AAA_19 nSTAND3 DnaB_C Motif Other DBs NCBI-GeneID:  118246346 NCBI-ProteinID:  XP_035399240 LinkDB All DBs Position 12:11681727..11736545 Genome browser AA seq 1862 aa AA seqDB search MQPLLQNDDLSLEAAIASIRPQLVEFLSHHQDWLLTTSQHFLPGATLRGLDGITDHREKV SKLLGLLEKAGPATWKQFAQHLCMECDLPLELEILLISSAGEGNLSQKQEARIDVSAWSS VPKGFACRRRSSSSISDKDAKQKRLDSAENYRHLLIDTVRQRYGSRRAAGAAAQEQMQPL AFNQAFVNLVIRQSKASRLKERTDKPREDLPSAPEPEECVDTAMRVSDLFGSVVRSGTTK LIFLFGKPGTGKTMLMHRICQKWAEGALHQFLFTFLFEFRQLNLLKRKLTLKELLFDLFL QPEESPDVVFQHLLENAQHTLIIFDGLDEFTGSMDMSSTSKGGPTLPSHMSISELFADLC HGKLLPGCTVLVTSRPKRLPDFLLNTVDVLAEVWGFDHKKVEEYVSHYFHHHSFKEQAIA HLKNNTKLLSMCLIPALCYVVCICLEYLLLKHQMSVELPQTMTQFYIKMLLIFINKQQGE YAVDEETQLNCNKKAILGLCDLALKGLEDKKLVFYVSDIPEHVKEFASLHGLLTVFEVKT SGTHPEAGYAFVHLSLQEFFAALCLMINKRVDKSYLKKKFSLKSKWTLKNEAKTEFIESF HIFLSGLSSKECRTFLMLLAEQNEAWVQDKQDAILQSLKKLAATHLTGPKVIELCHCTFE TQDLKLAQHIGSLLNFKYEFKNFRLTPLDMSALVFVINSGQDLTHLDFAGCLMDAGCLEV LASCKNVEHLSFRSRRFGDDFAAALSKSLREMGSLKKLELTGGNITAEGLTNLVQASSQC LQLEEINLQDNRIRDLEVKRVLDLFSRMEKLKKIDLSNNNLSLNAVLILAKEVITCQSAT ELHIRKDTVIISFSGTSGKVPRSLDLRWEENKECVIPTRHMKLCLQDRSLSLQHAKEIVS ILQSCPHLSEVDLSGNKLGDEGCSCLLESLPWISISKQLDLSHNLLSINGIYSLLKSVNT CQKTMEVEASLSHKTAVLRFTEDREFASPPHREEPLYPTDDQQVGEEKQTPILSKKIRLT DCHFQASDLEMLCTVLQEYSSISELDLSNNSLGDEGLSRLFQFLPNLKMLRSLKLDNNRI SLNSVFCLAQSLSTLEHIKTMNLSLGHMQVVHLSFWKRIRDRSTGRLRRNFLVHPKHIAN GRCFRLRDCTMGPEDMTRLCQILAHCTQLTEIDLSGNSLSDQSIERLLSFLPYLCHLTLL SIKNSTFSPRCTILFTNSIGLSERIRKVEVRSNQNAFLHLGTSIQSQKASCRLTDGAISQ GQIEELCRVLEQHGRLAEVDLSRNQLGDEGLRFLLDHLHRVHVTCSLNLSHNRLSQDGVL HLINAFATSRNTTEVLVSLCSKATLLVKLTSRDNPRKILSLTECNFQPEHLEKLWLVLEK CTSLTEYISSNNNMTVHAAERLLHSLRKTPGPLKLSIKEPWVCKKSVTNLLELAVQACGN ITAIMICKDKSLFQLGTRFPCCLEKVESVVSRSNLHEPEIKRACFYQRVLEKCIQLQELR WSHVELHDDDTKILVAVLLPLPKLKKFELTSCSIMPTGIDYLITGLQKCQAIEELNLGYM KLSDAAIPKLVLGLCKMPSLKRLILNHNSIGDDGCSRLAEALRNMHCMEEINLAHNKIGD PGLINIATALLEMQNLKRINLSGNSPSPAGGKKLMEALAYCKHIEELLLSRNVFGDGTAV KLALCLPHVSSLKILHLQKNNIGPTGGTELARALVACGLLEEISLSENDLGEGSIHALSE GLPHLEHLRKIDLKLCGITDDSSKSLSCAFQQCPAMEEIILSWNSLGDGGAQELASALPG MEKLKTLDLEKNRIGAFGAMKLSEELVKCPEIQFIRLWDNPVPKGLAADLTSQDPRLCFS FY NT seq 5589 nt NT seq  +upstreamnt  +downstreamnt atgcagcccctacttcagaatgatgatctcagtctggaagcagccatagcaagcatccgt ccccagctggtggagttcctcagtcaccatcaagactggctgctcacgacctcccagcac ttcctcccaggggccacactgaggggcttggatggcatcaccgaccacagagaaaaagtc tcaaagctccttggcctgctggagaaagctggccctgccacctggaaacagtttgcacag cacctctgcatggagtgcgacctccccctggagctggagatactgcttataagttctgca ggagaaggtaacttgagccagaaacaagaagcacgcatagatgtgagtgcctggtcttct gtgccaaaagggtttgcttgccgccgacgtagcagcagctctatcagtgataaggatgct aaacagaaacgcctggattcagctgaaaattatcggcatcttctcattgatacagtccgt cagagatacggaagcaggagagcagcaggagcagcagcacaggaacaaatgcagccactg gctttcaaccaagcctttgtcaatcttgttattcgacagagcaaagcctcccgattaaaa gagagaacagataaacccagagaggatctgcccagtgcccctgaaccagaagaatgtgtg gatacagccatgagagtgtcagatctgtttggtagtgtggtccgatcgggtacaactaag ttgatctttttgtttggtaaaccaggtacaggcaagaccatgctaatgcacaggatttgt cagaaatgggcagaaggtgccttacaccagtttctcttcacattcctttttgagtttcgt cagctgaatttattaaaaagaaaattgactctgaaggagcttttgtttgacttgtttctt cagccagaagagagccccgatgtagtgttccagcacctcttggaaaatgcccagcataca ctgatcatctttgatgggctggatgagttcacaggtagcatggacatgtcatccacttct aagggaggcccgacacttccctctcatatgtccatatctgagctctttgcagacctttgt catgggaagctccttccaggttgcacagtgttggttaccagccgacctaagagactacca gacttcttattaaacacggtagatgtgctagcagaagtttggggatttgatcacaagaag gttgaagaatatgtcagccactattttcatcatcattcattcaaagaacaagccattgct cacctgaagaacaacactaagctcctcagcatgtgtctgatccctgctctgtgttatgtt gtctgcatctgtttggagtatttgcttcttaaacatcagatgagtgtagagcttcctcag actatgacacagttttatataaaaatgcttctcatcttcataaacaaacagcagggagag tatgcagttgatgaggaaactcagctgaactgtaacaagaaggccattttgggtctctgt gatcttgcactgaaaggcctggaggataagaagcttgtattttatgtcagtgatattcca gaacacgtgaaagaatttgcttccttgcatggtctgctgactgtctttgaggtgaagacg agtggcactcacccagaggctggttatgcttttgtgcacttgagcttgcaggagtttttt gccgcactgtgtctcatgataaacaagagggtggacaagagctacctgaagaagaaattc tctttgaagtcaaagtggactttaaagaacgaagcaaagaccgagttcatagagagtttt cacatcttcctctcaggcctgtcatccaaagagtgtaggacgtttctcatgttgctagct gaacaaaatgaagcttgggtgcaggataagcaagatgcaatcctgcagtctctcaagaaa ctggcagccactcatctgacagggcccaaagtcattgagctctgccattgcacgtttgaa actcaagacctcaaattagcccagcacattgggagcctactgaatttcaagtacgagttt aaaaacttcagactgacacctcttgacatgtcggctctggttttcgtcataaactcgggc caggatttgactcatttggattttgcaggatgcctcatggacgctggctgtttggaggtt ctggccagctgtaaaaacgtggaacatttgagctttcggagtagaagatttggtgatgac tttgctgctgctctttcaaagagcttacgagaaatggggagcctgaagaaactagagttg acaggcgggaatatcacagctgaggggctgactaacttggtccaggcttcctcacagtgc cttcagctcgaggaaataaacttgcaggacaatcggatacgggatctagaggtaaagagg gtgttggacctgttttccagaatggaaaagctaaagaaaatagatctgagcaacaacaat ctttccttgaatgctgttctcattttggcaaaggaagtcatcacgtgtcaaagtgctacc gaactgcacatcaggaaggacactgtgataatatctttttctggcacatctggaaaagtt ccaagatctttggatttgagatgggaagaaaacaaggaatgtgtaattccaacaagacat atgaagttatgcttacaggatcgcagcctgtctttgcaacatgcaaaggagattgtgtcc attctccagagctgcccccatctctctgaagtggatttatcaggtaacaagcttggagat gaaggctgcagttgcctgctggaaagcctcccttggatatcaatttcaaagcagctggat ctcagtcacaacctcctctctattaatggcatttacagtcttttgaagtcagtaaatacc tgccagaagacgatggaggtagaagccagcctttctcataagactgcagtcctgaggttt acagaagacagagaatttgcttctcctcctcatagggaagagcctttgtaccctactgat gaccaacaggttggagaggaaaaacaaacacctattctctcaaaaaaaataagactgaca gactgtcattttcaagccagtgacctggagatgctttgcacagtcctgcaggaatatagc agcatctctgagctggacttatcaaataattctctgggagacgagggactttcacggctg tttcagttcctcccaaatttgaaaatgttaaggtcactcaagcttgataacaaccggatc tccctgaactccgtgttttgcttagcccagtccttatctacactagaacacattaaaaca atgaacctcagcttaggacacatgcaggtggttcatctaagcttttggaaaagaatcagg gacagaagtaccggcagattgagaagaaatttcctggtgcatcccaagcacatagcaaat ggacgatgctttcgtctcagggactgcacgatgggtcctgaggacatgaccaggctgtgc cagatactggctcattgtacccagctgacagaaatcgatctgtctggaaattcactgagt gaccagagcattgagagattactgagcttcctgccgtacctctgccatttaacactcctg agtattaagaacagcacattttcgccacgttgcaccatcttattcaccaactctattggt ctctctgagcggatcagaaaggtagaagttcggtcaaatcaaaatgcttttttgcattta ggaacgagcatacaaagccagaaggcatcctgcaggctgacggacggtgctatcagtcaa gggcagatagaggagctctgcagagttctggagcagcatgggcggctggcagaagtagat ctctccaggaatcagctaggggatgaaggcctgaggttcctcttggaccacttgcatcga gtgcatgttacctgttccctcaatctcagccataatagactttctcaggatggagttctg catctcataaatgcctttgccacatctagaaataccactgaagttctggtcagtttgtgc tccaaagcaactttactcgtgaaactgacaagcagagataacccaagaaagattttgagc ctcacggagtgcaactttcagccagagcacttggaaaagctatggttagtcctggaaaag tgcaccagtctgacagaatatatatcctcaaataacaacatgacagtgcatgctgcagag aggcttttacattcattgaggaaaactccaggtcctctaaagctcagcataaaagagcca tgggtatgtaaaaaaagtgtcacgaaccttcttgagctggctgtccaggcctgtggaaac attactgcgatcatgatatgtaaagataaaagcctcttccaattaggcacaaggttccca tgctgcctggagaaggtggaatcagtcgttagcagatctaatctacatgagccagaaatc aagcgtgcttgcttctatcaaagggttcttgaaaaatgcatccagcttcaggaactgaga tggtctcatgttgagctccacgatgatgacacaaaaattctagtcgctgttttgctacct cttccaaagctgaagaagtttgagctgacctcttgcagtattatgccaactggaattgat tacttgatcacaggcttgcagaagtgccaggccattgaagagctcaacctgggctacatg aaactcagtgatgctgccattccgaagcttgtgctgggcctttgtaaaatgccatctctg aaaaggctaatcttgaaccataacagtattggtgatgatggctgctccagactcgcagaa gccttgaggaacatgcactgcatggaagaaatcaatttagcccacaacaagattggagat ccaggcctgataaatatagccactgccctgctggaaatgcaaaacctgaagagaatcaac ctttcagggaatagtcctagtcctgctggagggaaaaagctgatggaagctcttgcctat tgcaagcacatcgaggagttactactatcaaggaatgtttttggagatgggacagcagtg aaacttgccctctgtctacctcatgtgagcagcctgaagatcctgcacttacagaaaaat aacattgggccaacaggagggacagagctggccagagccctggtggcatgtgggctgttg gaagagataagtttatcagaaaatgaccttggggaagggagtatccatgccctgtctgag ggactgccacacttggaacacctccggaagattgacttgaaactctgtggaatcactgat gattcttcaaaatcactttcttgcgccttccagcaatgccctgccatggaggaaataata ttgtcttggaattcccttggggatggaggagcccaagagttggccagtgccctcccaggg atggaaaagctgaagacgttagatctggagaaaaatcgcattggtgcctttggagccatg aagctatcagaggaacttgtcaagtgcccggaaattcagttcataaggctgtgggacaat ccggtgcccaagggcctcgctgcagacttgacaagccaagacccaagactgtgtttctcc ttctattag

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