Cygnus atratus (black swan): 118246363
Help
Entry
118246363 CDS
T09349
Symbol
HERC3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118246363 (HERC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cata04121
]
118246363 (HERC3)
Enzymes [BR:
cata01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
118246363 (HERC3)
Ubiquitin system [BR:
cata04121
]
Ubiquitin ligases (E3)
HECT type E3
118246363 (HERC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Peptidase_C25_C
Motif
Other DBs
NCBI-GeneID:
118246363
NCBI-ProteinID:
XP_035399278
LinkDB
All DBs
Position
4:complement(11771123..11815624)
Genome browser
AA seq
1050 aa
AA seq
DB search
MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL
NTKGQLGHESEGSKPEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGLTT
IEEAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS
PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLR
SQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIA
CGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACK
YHIVKHIFSGGDQTFVLCSKYENSLPADDFRTINETRYTCLINDETIDVWRQKLLEKNSS
NSVNNVVQILSSAACWNGSFLEKKIDEHFKTSPKTPGIDLNSTRVLFEKLMNSQHSILLD
QILKSFESFLIPQLSSSPPDVEAMRIYLILPEFPPFQDSKYYITLTLPLAMAILRLDTNP
SKVLDNWWSQVCPRYFLRLVDLYKGAVVYLLSGRKTLLIPVLFSSYITAALRLLEKLHKV
NQKVKHVEYDKFYIPEISSLVDIQEDYLMWFLHQAGMKVRPSIMQDAVTLCSYPFIFDAQ
AKTKMLQTDAELQMQVAINGANLQNVFMLLTLEPLLARSPFLVLHVRRSNLVGDALRELS
IHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYPESNLLWFSDT
CFVEHNWFHLIGIICGLAIYNFTVVDLHFPLALYKKLLNVKPCLEDLKELSPTEGRSLQQ
LLDYPGEDIEETFCLNFTICRESYGVTEQKNLIEDGDNILVQKDNREEFVEAYVNYIFNF
SIHEWYTAFSTGFLKVCGGKVLELFQPTELRAMIVGNSNYNWEELEESAVYKGDYTATHP
TVRMFWETFHAFPLEKKKKFLLFLTGSDRIPIYGMSSLRIVIQSTASGEQYLPVAHTCYN
LLDLPKYSSKEILSARLVQAIDHYEGFSLA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgctatgctggggttactcgtcttttggacaacctgggataggtagcaacctccaggtc
atcattcctgaaccgcaggtgtacggattcatccatgatagaaatgtcaaggaggtggca
tgcggaggaaaccattccgtgttcctgttagaagatggggaagtgtatacctgtggcttg
aacaccaaaggccagctggggcatgagagcgaaggaagcaagccagaacaaattggagcc
ctggcagggcagcatatagtccacgtggcctgcggagagtctcacagcgtggcactcagc
gaccaggggcagctcttctcctggggtgccggcagcgatggacagttgggcctcaccact
atagaagaagcagtgacagtgccaaggttgataaagaaactgaaccaacagacgatactg
caggtttcctgtggaaactggcattgcctggctttggcagcagatggtcagttcttcaca
tggggccagaacagctatggtcagctgggcttgggtaaagaatgtccctcccaagccagt
ccacaacgtgtcaaatctcttgatggtatccctttggctcaggttgctgcaggtggagca
cacagttttgccctctctctctcaggagctgtgtttggctgggggaagaacagctcagga
caactgggactaagtgatgaacgagaccgagaatcgccttgccatgtgaagctgttgcgg
tctcagaaggttgtttacatcagctgtggagaggaacacacggcagttctaacaaagagt
ggaggggtgttcacgttcggtgcaggttcctgtgggcaactgggacatgactccatgaat
gacgaagtgaacccccgaagagttcttgagctaatgggcagtgaagtatcccagattgcc
tgtggcagacaccatactttagcctttgtgccttcttcaggaatgatctatgcatttggc
tgtggaacaagaggccagctgggaactgggcacacttgcaatgttaagtgtccctctcct
gtgaagggtcactgggcagctcacaatgggcaactctcagggaagcctgatgcctgtaaa
tatcacattgttaaacatatcttttctggaggagaccaaacatttgtgctttgctccaaa
tatgagaattccttgcctgctgatgatttccggaccataaatgaaacacgttatacctgt
ttaataaatgatgaaactatagatgtctggaggcaaaagcttttagaaaagaacagttct
aattctgtcaataatgttgttcagatactgtcctcagctgcctgctggaatggaagcttc
ttggagaagaaaattgatgaacattttaaaaccagtccaaagaccccggggattgatttg
aactccaccagagtgctgtttgagaagctgatgaactctcaacactccattctcctagac
cagatactgaagagctttgaaagtttcttgattcctcagttgtccagctcaccaccagac
gttgaggcaatgaggatctatctgattctccctgaattcccacccttccaagattcaaag
tattatatcacgttaacgcttcctctggcaatggctattctgcgcttagacaccaacccc
agcaaagttcttgataactggtggtctcaagtgtgcccacgatatttccttaggctagtg
gatctctataaaggtgcagtagtttacctcctcagtggaagaaagacattgttgatcccg
gtcttgttcagtagctacattacagctgctctcagacttctggagaaactccacaaggta
aatcagaaggttaaacatgtagaatatgataagttttatatccctgagatttccagcttg
gtggacattcaggaggattatctcatgtggttcctacatcaggctggaatgaaagttaga
ccatccatcatgcaggatgctgtgacgctctgttcttatcccttcatctttgacgctcag
gctaagaccaagatgttacagacagatgcagaactacagatgcaggtggcaataaatggt
gcaaatttgcagaatgttttcatgcttctcaccctggagcctctgctggccagaagccct
ttcctggtacttcatgtccgcaggagtaatttagtcggtgatgctttaagggagttgagc
atccattcagatattgatttgaaaaagcctcttaaggtcatctttgatggtgaggaagct
gttgatgctggaggagtgacaaaggaatttttcctcctcttgctaaaagaactcctcaac
cccatctatggcatgttcacttactacccagagtcaaacctgctgtggttttcagacacg
tgttttgtagaacacaactggtttcacttgattggcatcatatgcggtcttgcaatctac
aacttcacagtagtagaccttcacttccctttggctctgtacaaaaaactcttgaatgtg
aagccctgcctagaggatttgaaggagctgtcccctacggaaggaaggagtcttcagcaa
cttttagattatcctggggaagatatagaagagacattctgcttgaattttacaatctgc
agggagagctatggtgtgacagagcagaagaacctgattgaagatggagacaatattctg
gtgcagaaggacaatagggaagaatttgttgaagcctatgtaaattacatcttcaacttc
tccatccatgagtggtacacagctttttccactggcttcctgaaagtatgtggtgggaag
gtcctggaactcttccagcccacagagctcagggccatgatagttggaaacagtaactac
aactgggaggaactggaggagagtgccgtctataagggagactacactgcgacacaccca
accgtgaggatgttttgggaaacgtttcatgcatttcccttggaaaagaagaagaaattt
ctcttgttcctgacaggcagcgaccgcattcccatctacggcatgtcaagccttcgcatc
gtcatccagtccacagccagcggggagcagtacctgcccgtggcgcacacctgctacaat
ctcctggacttgcccaagtacagcagcaaggagattcttagcgcccggctggtgcaagcc
atcgatcactatgaaggcttcagcttggcttga
DBGET
integrated database retrieval system
