Cygnus atratus (black swan): 118246375
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Entry
118246375 CDS
T09349
Symbol
CDH5
Name
(RefSeq) cadherin-5
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04514
Cell adhesion molecules
cata04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118246375 (CDH5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
118246375 (CDH5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cata04515
]
118246375 (CDH5)
04090 CD molecules [BR:
cata04090
]
118246375 (CDH5)
Cell adhesion molecules [BR:
cata04515
]
Cadherins
Major cadherins
118246375 (CDH5)
CD molecules [BR:
cata04090
]
Proteins
118246375 (CDH5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_4
Orf78
LysM2_NFP
Motif
Other DBs
NCBI-GeneID:
118246375
NCBI-ProteinID:
XP_035399293
LinkDB
All DBs
Position
12:9476906..9488331
Genome browser
AA seq
776 aa
AA seq
DB search
MKKLILLLSLFLAPAFAYKESQKTKQNFSSNNTSHKRLKRDWIWNQMHIKEEIDTPLPHH
VGKITSSVRNNNAKYIIEGEYANTIFKVEETSGDVYAFERLDREKKAEYELTALIIDRRN
NRSLEPPSKFIIKVYDINDNAPVFVQKVFNGSVPEMSPVGTSVTKVTAVDADDPTVTGHA
TVTYQVIKGDEYFTVDDSGVIFTTRADLDRENQSTYEIIVKAKDAPGFSGDSSTATVIIT
LTDINDNFPVFKHPSFHFKVPENVSVGGEVGRVKVEDIDEPQHRNTKYSFVRGDYRDTFE
IVANPYTNEGIIRPKKPLDFEKVAEYRFDIEATDPTVDLRYFKSGGSRSISTVTIEVTDV
DEPPVFTKLPYEFKVRENDPEKKTLGSVWAYDPDAAKRKIRFVRRRASPNGDYIRVSDTG
IIQLPKPLDREFSSSYNITVAAQEILEDGRLSDRESHAQVHVIVIDENDNAPELVYPEEP
RVCENAAPGKVIITISATDKDEISPRGFFKYSLATEDSNFSLVENHDNTANITVKYGQFN
RELAKIHYLPVIISDNGDPELSSTNTLVISVCKCNEKGDFTFCEERAKQVGVSIQALVAI
FVCIFTIIVLFAVIALLILLRKRHKKDLSGLGRNVAEIHEQLVTYDEEGGGEMDTTSYDV
SVLNSVRKNGMKPETVPSPYAQVQKPPGNPTSGAEKMEIMIEVKKDEADNDRDLLPYDTL
HIYGYEGAESIAESLSSLESGSSDSDIDYDFLNDWGPRFKMLAELYGSEPNEDFVY
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcttattctgcttttgtcattgttcttggctccagcatttgcctacaaagaa
agtcagaaaacaaaacaaaacttttcttcaaacaataccagtcataaacgacttaagaga
gactggatatggaaccaaatgcatatcaaagaagagattgatacgccattaccacaccat
gttggcaagattacatcgagtgtaaggaacaacaacgctaagtacattattgaaggtgaa
tatgccaataccatctttaaagtggaagagaccagtggtgatgtatatgcctttgagagg
ttggacagagaaaagaaagcagaatatgagctgacagctctcattattgacagaagaaac
aaccggtcactggaaccaccatctaaatttattatcaaggtttatgatattaatgacaat
gcccctgtgttcgtacaaaaggtattcaatggatctgtcccagaaatgtcaccagtagga
acctctgttaccaaagtgacagctgtagacgctgatgacccaacagttacaggtcatgcc
acagttacctaccaagtcattaaaggagatgaatatttcacagttgatgactccggtgtg
atttttacaaccagagctgatttagacagagagaatcaatcaacgtatgaaattattgtt
aaagcaaaagatgctccagggttttctggggattcaagcacagctacagtcattatcact
ttaacagacatcaatgacaactttcccgtattcaaacacccatcatttcactttaaagtt
cctgaaaacgtttcagtaggaggagaagttggcagagtcaaagtggaagacattgatgaa
ccacaacacagaaatacaaaatacagttttgtcagaggagattacagggacacctttgaa
attgttgcaaatccatacacgaatgaaggaattattagaccaaagaagcccctggacttc
gaaaaagtagcagaatacaggtttgacattgaagcaacagatcccacagttgatcttcgc
tattttaaatccggtggctctaggagcatttcaacagttaccattgaagtcactgacgtg
gatgagccccctgtcttcactaagctaccatatgaatttaaagtaagggaaaatgatcca
gaaaaaaaaacacttggttcagtttgggcatacgaccctgacgcagctaaacggaaaatc
agatttgttcgacgaagagctagtcctaatggagactacattagagtatctgacactgga
attattcaacttcccaagcccctggatagagaattcagctcctcgtacaacatcactgta
gcagcccaggaaatcctggaagatggccgtctttctgacagagaatcacacgcccaagtt
cacgtaatagtcattgatgaaaacgacaacgctccagaacttgtttatcctgaggaaccc
agagtgtgtgaaaacgctgctccaggaaaggtaatcatcacgatttcagctactgacaag
gatgaaatatcacctagaggtttcttcaaatactccctggccacagaagatagcaacttc
tcgttggttgagaaccacgataacacagctaatatcacagtcaagtatggacagtttaat
cgtgaacttgccaaaatccactacctgcctgtcatcatctcagacaacggtgatcccgag
ctcagcagcacaaatacacttgttatcagtgtctgcaagtgtaatgaaaaaggcgacttc
actttttgtgaggaaagagctaaacaagtcggagttagtatacaagcactggtggccatt
tttgtctgtatcttcacaatcatcgttttgtttgcagtaatcgccttgctaattcttcta
agaaagagacacaagaaggatttgagtggtcttgggaggaatgtggcagagattcacgag
cagcttgtaacttacgatgaagaaggtggtggtgaaatggataccaccagttatgatgtg
tctgtactcaactctgtgcgcaagaatggtatgaagccagaaacagtgccctctccatac
gcacaggtccaaaaacctcccggaaatccaacttctggtgctgaaaaaatggaaattatg
attgaggttaagaaggatgaagctgacaatgacagggatttgctgccatatgacacactt
cacatttatggctacgaaggtgctgagtccattgcagaatctctcagttctttggaatca
ggctcctcagactcagatattgattatgactttctaaatgactggggacccaggtttaaa
atgttagctgagctgtatggatcagaaccaaatgaagattttgtgtattaa
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