Cygnus atratus (black swan): 118246440
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Entry
118246440 CDS
T09349
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118246440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cata03021
]
118246440
03036 Chromosome and associated proteins [BR:
cata03036
]
118246440
Transcription machinery [BR:
cata03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118246440
Coactivators
SAGA/TFTC/STAGA complex
118246440
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
118246440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
118246440
NCBI-ProteinID:
XP_035399428
LinkDB
All DBs
Position
12:10172596..10316055
Genome browser
AA seq
1050 aa
AA seq
DB search
MAAGASDPLEEMLLFSEEVDEKAVSDLVGSLESQLAGGRGSAEAPQPRTSAPSQQQQPQQ
QQGSLAGGSSPVRQQQGHPAPPPAPAAGEAAGRPGAAESRAPAQGPLPSPSPPAAAAVSA
AAAAAGRGVSVNSSSVQQSHGAALLSSSSSSPAAPAPPQPAGPPAQPVTTTNNNHPRAAA
RDAASPDPGGSPPAADCPPPLRAEAAGGSGAGGGGRQGAEEEEESTAAAASSTPSVLPGE
AAPNGEGAGGRPAAVPPVSNHQSRGSADAAPAQPKPSHGPLPALNALGNSASPAPAAGAA
TPPGQGSVANCAPPPSAAVAPGGGPKPAGVAKAGVALPAAPQALSPRPALGAAPRIVAPQ
LIVRPPQQTTIQLPPGFTIPPGMVLVRTDAGQLVMVPQQALAQAQMQAQVQTQGQGPTSI
SPRLSVPTSGPVFRLSTAQQPTSVATSTVRLGLPVQAKVVQSTVTPVSATSAATLPGGSI
LSHTTVSVVSTSAQNVFKTTVATVGTSASQQPAVITGGQTQASAQTQSQPRLPLPPHTTA
QVPAQPQVIPSSPVPGTTVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSRNVKALVQ
DLLDAKIDPEEFTGRLQSELKSSPQPYLVPFLKKSLPALRQSLLNSQHSVLQGQPSQQSL
QQTKLSQVIPQSASGSISSVVTTQTIGIRQPNNICTVSVSNTVQPPQVKVVQSNQSSQLQ
IIQSTSAQTVKRNPACQTTQIRMPVVITQTIRPQGTVGKAPTIQASKSPGGFGVQVSGNQ
KNKLNDPGGGSFRDDDDINDVASMAGVNLNEESARIMATNSDLVGTQIQSCKDEPFLAAI
PLHKRILEMAKKLGITDVPAEVVTFISHATQNRLRTVIEKVTVITQHRMESYKDDEWYEQ
ATDVRSQLKFFEQLERLEKQRKDEQEREILLKAAKSRSRQEDPEQARLKQKAKEMQQQEL
AQMRQRDANLTALAAIGPRKKRKLDSPGLLTIGGEGLSMSGGSQAGLGTPSSRQYARQKI
TRVNLRDFIFYMEQERETSHSLLLYRALLK
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcgcctcggaccctctggaagagatgctgctcttctccgaggaggtggac
gagaaggcggtcagcgacctggtgggctccttggaatcgcagctggctggcggccggggc
tccgccgaggcgccccagcccaggacctccgccccgtcccagcagcagcagccgcagcag
cagcaggggagcttagcggggggcagcagccccgtccggcagcagcaagggcaccccgct
cctcccccggccccggcggcaggggaggcggcggggcgccccggagccgcggagagccga
gcccctgcccaggggccgctcccgtccccgtcccccccggcggcagcggcggtgtcggcg
gcggcggcggcggcagggcggggagtgagtgtaaacagtagtagtgtgcagcaatcacat
ggagccgctctcctcagcagcagcagcagcagccccgccgcccctgccccgccgcagccc
gccggcccccctgcccagcctgtcaccaccaccaacaacaaccacccccgtgcggctgcc
cgggacgcggccagccccgaccccggcggcagcccgcccgccgccgactgcccgccgccg
ctgcgagccgaggccgcgggggggagcggggcggggggcggcgggcggcagggagccgag
gaggaggaggagagcaccgctgctgccgcctcctcaacgccctcggtgctccccggtgag
gcggcgcccaacggggaaggcgccgggggccggccggcggcagtgcccccagtcagcaac
catcagagccgcggcagcgccgacgccgccccggcgcagcccaagccctcgcacggcccg
ctccccgcactaaacgcactcggcaactccgccagccccgcgcccgccgccggcgctgcc
accccgccgggacaaggctcggtcgccaactgcgccccgccgccctccgccgcggtggcg
cccggtggcggccccaagcccgcgggcgtcgccaaggcgggcgttgcgctccccgccgcc
ccccaggccctgtcgcccaggccggcgctgggcgctgccccgaggatcgtggccccccag
ctgatcgtcaggccgccgcagcagaccaccatccagctgccgccgggcttcacgataccg
ccgggtatggtcttggtgcgcacggatgctggacaacttgtaatggtgcctcagcaggct
ctagcacaggctcaaatgcaggctcaagtacaaacgcagggacagggtcctaccagcatt
tcacctagactttcagtgcccacaagtggcccagtttttcgcctgtcaacagctcagcaa
ccaacttctgtagccacatctactgtccgcctaggacttccagtgcaagccaaagttgtt
caatcaactgtgacacctgttagtgctacgtccgctgcaactctgccaggaggctctatt
ctttcacataccacagtatcagtagtttcaacaagtgctcaaaatgtattcaagaccaca
gtagcaacagtaggaacatcagcatctcaacaacctgcagtaattactggtggacaaact
caagcttcagcacagacgcagagtcagcctcggctgccacttccacctcatacaacagca
caagtaccagcacagcctcaagtaataccaagctctcctgtacctggaactacagttgta
tcacaggaaatgcaagaaaatgtgaaaaaatgcaaaaactttttagctactcttataaag
cttgcttctcataattcaccttctccagaaacgtcccgtaatgtgaaagctctggttcag
gatttgttggatgcaaagattgatccagaagaatttacaggccgccttcagtcagaactc
aaatcatcaccccagccatatcttgtacctttccttaagaaaagtctacctgcattgaga
caatctttactgaatagtcaacattcagttttgcaaggacagccgtctcagcagtcactt
caacaaaccaagctatcacaagttatacctcaatctgcctctggaagtatttcctctgtt
gtcacaacgcagacaataggaataaggcaaccaaacaacatttgcacagtctctgtatca
aatacagtgcagcctcctcaggttaaggtggtacagtcaaatcagagttctcaactgcag
attatccagtcaacatctgctcaaactgtgaaacgaaaccctgcttgccagactacccag
attaggatgccagtggtaataactcagaccattagaccacaaggcacagtagggaaggca
ccaacaatacaagccagcaaaagtcctgggggctttggtgttcaggtctctggaaatcag
aaaaacaagctgaatgaccctggaggtggttctttcagagatgatgatgacatcaatgat
gttgcatctatggccggtgttaatctaaatgaagaaagtgcccgaattatggctaccaac
tctgacttggttggaacccagatacagtcctgtaaagatgaaccctttcttgctgctata
cctctacacaaacgcatacttgaaatggctaaaaaattaggaattactgatgtgccagct
gaggtggttacttttatttcccatgcaacacaaaacagattaagaacagtgatagaaaaa
gtaacggtgataacccagcaccgcatggaatcgtacaaagatgatgagtggtatgaacaa
gctacagatgtccgatcacagctaaagttttttgaacagttggagcgtttagaaaagcaa
aggaaagatgaacaagagagggaaatcttgctaaaggctgccaagagtcgctcaaggcaa
gaagacccagagcaagctagactgaaacaaaaagcaaaggagatgcagcaacaagaactt
gcacaaatgaggcagagggatgctaatctaactgcgttggcggctatcggtccccggaag
aaacggaagcttgattcacctggactgctcaccataggaggagagggcctcagtatgtct
ggtggaagtcaggctggcttggggactccttcatccaggcagtatgcccgacagaaaata
actcgcgtaaacctcagggacttcatcttctacatggaacaggaaagagaaacgagccat
tctctcctgctctatcgagctctgcttaagtaa
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integrated database retrieval system
