Cygnus atratus (black swan): 118246443
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Entry
118246443 CDS
T09349
Symbol
RFWD3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cata04121
]
118246443 (RFWD3)
Enzymes [BR:
cata01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118246443 (RFWD3)
Ubiquitin system [BR:
cata04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118246443 (RFWD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-C3HC4_2
zf-C3HC4
Beta-prop_WDR5
zf-RING_UBOX
WD40_CDC20-Fz
Beta-prop_THOC3
EIF3I
WDR55
zf-rbx1
zf-RING_5
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
zf-RING_11
Beta-prop_WDR36-Utp21_1st
Rtf2
zf-RING_Vps41
Casc1_N
Nairovirus_Gn
Beta-prop_RIG_2nd
Myo5a
zf-C3HC4_4
WD40_Prp19
zf-UDP
WD40_2
zf-Nse
Beta-prop_WDR75_1st
Beta-prop_EIPR1
DUF7837
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RSE1_2nd
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
118246443
NCBI-ProteinID:
XP_035399435
LinkDB
All DBs
Position
12:complement(13236202..13260433)
Genome browser
AA seq
735 aa
AA seq
DB search
MAQEEMEVDLQPVADYPAENHRTLPPEPSGHTPALSSEGGSVTVISDDEAVGASSAGTGQ
AAAGPDHPANPSGLQGFPGVFDQLPLVPGPQAARRPPVRRARRQQRIGGSQRTVSARAPL
HSYFQISRSQEQATTPAAHLELLRVAGSSQEDGAPETELSGSASSASEEEEEEAEAAAPP
SPAAQEPPAAASSVSSQARAELPQASAGRGSYEDEGAEVQQKQRTPLKQPEPSVPVASLE
EEEGDTCAICFEQWTNAGDHRLSALRCGHLFGYTCIERWLRGQAGKCPQCNKKAKRSDIV
VLYARTLKALDTSEQERMKSSIEKEQMLRRRAELESAQSRLQLQVLTDECSKLRRQVQEL
KALVAQHNASASQQPGRFRTGFPGGLPSSQSQRRYHLEKVFVVSQAGNCRVMAYCDSLGC
LVVSQPSPQSTFIPGCGVKMMSVANLKSSQYIPIHSKQIRGLAFGSRADGLLLSAALDST
LKLTSLATNTVVQTYNTGRPVWSCCWCLDDTNYIYAGLVNGSIMIYDLRDTNSHVQELVP
QKSRCPMVSLSYLPRMASASLPYGGILAGTLEGACFWERKAGNSYRPHHLLLEPGGCIDI
QTEISTRHCLATYRPSKNNPCVRCVMMELTCSPLAEASEDVVCSSNPVQTFSAGPTCKLL
TKNAIFQSPEEDGSIFVCAGDEASNSAMLWDAGSGSLLQKLQADLPVLDICPLEVNQTHL
LATLTEKMVNVYKWQ
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagaagagatggaagtcgacctccaaccagtggctgattaccccgcagagaac
cacaggacacttcccccagagccctcgggccacaccccggcgctcagcagcgaaggaggc
agcgtgactgtcatctctgacgacgaggctgtcggcgcatcgagcgctgggacagggcaa
gcagctgccgggcccgaccacccagcgaatcccagcggactgcaggggtttccaggggtg
tttgatcagctcccgctggtgcccgggccgcaggctgcgagacggccaccagtgagaagg
gctcgcaggcagcagaggatcggcggctcccagaggacggtcagtgccagggcaccgttg
cacagttacttccaaatcagcaggagccaggagcaagctacgacaccggctgcgcatctg
gagctcttgcgtgtcgcggggagcagccaggaagatggggctcctgaaacagagctgagt
ggctctgccagcagcgcttctgaggaggaggaggaagaggcggaggctgcagcaccgccg
tccccagcagcccaggagccgcctgcagcagccagctcagtttccagtcaggcccgagca
gagctgcctcaagcttctgcaggacgtggaagttacgaagatgaaggggctgaagtccag
caaaagcagagaactccactaaagcagccggagccgtcggttcccgttgcctcgctggag
gaggaggagggggatacctgtgccatctgttttgagcagtggaccaacgccggggaccac
cgcctgtcggcgctgcgctgcgggcacctcttcggctacacctgcattgagaggtggctc
agggggcaggcggggaagtgcccccagtgcaataagaaggcgaaacgctctgacattgtg
gtgctgtatgcccgtactctgaaagcgctggacaccagtgagcaggaacgcatgaagagc
tctatagaaaaggagcagatgttgcggagacgggccgagctggagtctgcacagagccgt
ctccagttgcaggttttgacagacgaatgcagcaagctccgcaggcaagttcaggagctg
aaggctctggtggcccagcacaacgcaagtgcttctcagcaacctggcagattccgcacc
ggcttcccaggtggcctcccctccagccaaagccagcgcaggtaccacttggaaaaggtc
ttcgtggtgtctcaggcggggaactgcagagtgatggcatactgcgactcgctgggctgt
ctcgtggtatcgcagccttctccacagtctacttttattcctggctgtggcgttaagatg
atgagcgtggccaacctgaagagcagtcagtacatccccatccacagcaaacagattcgg
gggctggctttcggcagtcgtgcggacggcttgctgctctctgccgctctggacagcact
ctcaaactgaccagcttggcaacaaacactgtggtacagacatacaatactggccgtcct
gtctggagctgctgctggtgtctcgatgacacaaattacatctatgctgggttggtcaac
ggctccatcatgatctatgatttgagagacactaactcccacgtccaggaactggtccct
cagaagtccaggtgccccatggtgtcgctgtcttacctgccccgaatggcctcggcctca
ttgccttacggtgggatactagctgggaccttggaaggagcctgtttttgggaacggaag
gctggcaactcctaccggcctcatcacctgctgctggaaccaggaggatgcattgatatt
cagacagagatcagcacgcggcactgcctcgcgacctacaggcccagtaaaaacaacccg
tgcgtgcgttgtgtcatgatggaactgacctgcagcccgctggcagaagcctcagaagac
gtggtgtgttcttctaacccggtgcagactttcagtgctgggcccacctgcaagctgctg
accaagaacgccatttttcagagcccggaggaggatggcagcatctttgtgtgtgctggc
gatgaggcatctaattctgccatgctctgggacgccggcagtggctccttgctgcagaag
ctgcaggctgacctgcccgtgctggacatctgccccttggaggtgaaccaaacccacctg
ctggccacgctcaccgagaagatggtgaatgtctacaagtggcagtga
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