Cygnus atratus (black swan): 118246509
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Entry
118246509 CDS
T09349
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cata04812
]
118246509 (KATNB1)
Cytoskeleton proteins [BR:
cata04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
118246509 (KATNB1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_TEP1_C
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_RIG_1st
eIF2A
RMC1_N
WDR54
Beta-prop_WDR19_1st
PROPPIN
VPS8_N
Beta-prop_DCAF12
Beta-prop_LRRK2
Beta-prop_IFT140_2nd
Beta-prop_VPS8
Beta-prop_IP5PC_F
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
118246509
NCBI-ProteinID:
XP_035399542
LinkDB
All DBs
Position
12:11345261..11363670
Genome browser
AA seq
657 aa
AA seq
DB search
MAAPITTKAAWKLQEITAHSSNVSSLVLGKSSGRLLATGGDDCRVNIWSVNKPNCIMSLT
GHTSPIESLQININEELIVAGSQSGSIRVWDLEAAKILRTLFGHKANICSLDFHPFGSFV
ASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASAADDHTVKLWDLAAGK
MMFEFTGHAGPVNVVEFHPNEYLLASGSSDRTVRFWDLEKFQVVSCIEEEATPVRCVLFN
PDGCCLYSGFQDSLRVYGWEPERCFDVVLLNWGKVADLSICNNQLIGVSFAQSTVSSFVV
DLSRVTKSGSVPHGLIRDDKPLIQPTPTGSSLRRIYDRPSTSCSKPQRVKHNSESERRSP
SSEDDRDEKESKAEIQNPEDYKEIFQPKNAISRTPPRNNEPFPAPPEDEPVTAKEAVKPN
QAVEVQTPLPKQELPDQIQRPPIASSTPVTRAELSVIPAARNEPIGLKATDFLPAVKNQS
QTELVDEEAMSQIRKGHETMCVVLTSRHKNLDTVRAVWSTGDIKNSVDSAVAINDLSVVV
DLLNIVNQKASLWKLDLCTVVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDMLA
APPSVGVDITREERLHKCKLCYKQLKNISNIVKNKSGLSGRHGSAFRELHLLMAVLE
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccatcaccacgaaggcggcctggaagctgcaagagatcacggctcacagc
agcaatgtgtcctcgctagtcctggggaagagttcaggccggcttctggcaactggagga
gatgactgtcgagtcaacatatggtcagttaacaagcccaactgtatcatgagcttgaca
gggcacacatcacccattgagagtctacagatcaatataaacgaggaactcattgttgca
gggtcccagtcagggtccattcgcgtttgggacctggaagctgccaaaattcttcgtaca
ttatttggtcacaaagcgaacatctgcagccttgatttccatccttttggaagttttgtg
gcatctggctctttggacacaaacattaagctctgggatgtaagaagaaaaggctgtgtc
ttcaggtataagggtcacactcaagcagttagatgtctccgatttagtcctgatggcaaa
tggttagcctctgctgctgatgatcatactgtaaagctgtgggatctggctgctgggaag
atgatgtttgagtttacaggacatgctggcccagtgaacgttgtagaattccatccaaat
gaataccttttggcttctggcagctctgacaggactgttcgattctgggacctggagaag
tttcaagttgtgagctgcattgaagaagaggctactcccgtcaggtgtgttcttttcaac
ccagatggctgttgtttgtatagtggtttccaggattcactgcgtgtgtatggctgggag
cctgagcgctgttttgatgtggtcttgctgaactggggaaaagtagctgacttatctatc
tgcaacaaccagctgataggagtttcctttgcgcaaagcacagtttcttccttcgttgtg
gatctcagcagagtcacaaagtcaggttcggttcctcatgggctgatcagggatgacaag
cctctcattcagcccacccccacagggtcctcccttcgacgtatctatgacaggccctca
actagctgcagcaagccacaaagagtgaagcacaactcagagagtgagaggcgcagtccc
agcagtgaagatgaccgggatgagaaggaatcaaaggctgagatccagaacccagaggat
tacaaagagatcttccagcccaagaatgccatctctcgaactcctccacgaaacaatgag
ccttttccagccccccctgaagatgaacctgtaactgcaaaggaagcagtgaagcctaac
caagctgtggaagtccagaccccgttgccgaagcaggaacttcctgaccaaattcagagg
ccaccaattgcctcctcaactcctgtgaccagagcagagctgtcagtgattcctgcagcc
aggaatgagcccattggcctgaaagcaactgactttctaccagctgtgaaaaaccaaagc
cagactgagcttgtggatgaggaagccatgtcccaaatcagaaaaggccatgagaccatg
tgtgtggtgctcaccagccgccacaagaatctggacactgtgcgggctgtatggagcacc
ggtgacatcaagaactctgtggactctgctgtagcaatcaatgatctgtctgttgttgtg
gacctcttgaacattgtcaaccaaaaagcgtctctctggaagttagatttgtgcactgta
gtcctgcctcagatagaaaaactactccaaagtaaatatgaaagttacgtgcagactggc
tgcacctccttgaaactcattctccagagattcctgccattgatcacagacatgcttgct
gcaccaccttcggtcggcgtagacatcaccagagaggaaaggctccataaatgcaagctg
tgctacaagcagctgaagaacatcagcaacatcgtcaagaacaagtctgggctcagcggc
cgccatggtagtgccttccgggaactgcatctcctcatggctgtcctggagtga
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