Cygnus atratus (black swan): 118246575 Help Entry 118246575         CDS       T09349                                  Symbol SF3B3 Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism cata  Cygnus atratus (black swan) Pathway cata03040   Spliceosome Brite KEGG Orthology (KO) [BR:cata00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     118246575 (SF3B3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cata03021]     118246575 (SF3B3)    03041 Spliceosome [BR:cata03041]     118246575 (SF3B3)    03036 Chromosome and associated proteins [BR:cata03036]     118246575 (SF3B3) Transcription machinery [BR:cata03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      118246575 (SF3B3) Spliceosome [BR:cata03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     118246575 (SF3B3)  Complex B     118246575 (SF3B3)  Complex C    U2 SnRNP specific factors     118246575 (SF3B3) Chromosome and associated proteins [BR:cata03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      118246575 (SF3B3)     TFTC complex      118246575 (SF3B3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_BBS7 Motif Other DBs NCBI-GeneID:  118246575 NCBI-ProteinID:  XP_035399647 LinkDB All DBs Position 12:complement(13073296..13098974) Genome browser AA seq 1217 aa AA seqDB search MFLYNLTLQRATGISYAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQY LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDT PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG EDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVL IGVGKLLRVYDLGKKKLLRKCENKHIANYICGIQTIGHRVIVSDVQESFIWVRYKRNENQ LIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVAEELDRT PPEVSKKLEDIRTRYAF NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgttcctgtacaacctgacgctgcagcgcgccacgggcatcagctatgccatccacggc aacttctcaggaaccaagcagcaagaaatcgtcgtgtcccggggcaagatcctggagctg ctgcgcccggaccccaacacggggaaggtgcacacgctgctgacggtggaggtgttcggg gtcatccgctcgctcatggccttccgcctgacgggcggcaccaaggactacatcgtggtg ggcagcgactcggggcgcatcgtcatcctggagtaccagccctccaagaacgtcttcgag aagatccaccaggagaccttcggcaagagcggctgccgcaggatcgtgcccgggcagtac ctggctgtggacccaaagggccgcgcggtcatgatcagcgctatcgagaagcagaagctg gtgtacatcctgaacagggatgccgccgcccgcctcaccatctcctccccgctggaggcg cacaaggccaataccttggtctaccacgtggtgggagtcgacgtggggtttgagaacccg atgtttgcctgcctggagatggattacgaggaagcagacaacgatccaacgggggaagca gcagccaacacacagcagacgctgacgttttatgagctggacctgggtttgaaccacgtt gttaggaaatacagcgagcccctggaagagcacggcaacttcctgataacagttcctggt ggttctgacggccccagcggggtgctgatctgctcagagaactacatcacgtacaaaaac ttcggtgaccagcctgacatcagatgcccaattcccaggagacggaacgacttggacgac ccggagaggggtatgatttttgtctgctccgccacacacaagaccaagtccatgttcttc ttcctggcccagacggagcagggagacatcttcaaaatcactctggagaccgacgaagac atggtgacggagattcgactcaagtacttcgacaccgttcctgtggctgctgccatgtgc gtgctgaagacgggctttctctttgtggcttctgaatttggaaaccactacctgtaccag atagctcacctgggcgacgacgacgaggagcccgagttctcttctgccatgcccctggag gaaggagatacgttcttcttccagccacgacccctcaagaacctggtgctggtggatgag ttggacagtttgtcgcctattctgtgttgtcagatcgcggatctggccaacgaggacacc ccccagctgtacgtggcctgtggccgggggccccgctcgtctctgagggttctgaggcat gggctcgaggtgtccgaaatggccgtctcggagctgcccggtaaccccaacgctgtgtgg accgtgaggaggcacgttgaagatgaatttgatgcctatatcatcgtgtccttcgtaaac gccacgctggtgctgtccatcggagagaccgtagaagaagtgactgactcggggttcctg ggtacgacgcccaccttgtcctgctccctgctgggggacgatgctttggtgcaggtgtac ccggatgggatccggcacatccgagcagataaaagggtaaacgaatggaagacgcccggg aagaaaaccatcgtcaagtgcgctgtgaaccagaggcaggtggtgatagcgctgaccgga ggagagctggtttacttcgagatggacccgtcgggacagctgaacgagtacacagagcgg aaggagatgtcggccgatgtggtgtgcatgagcttggccaacgttccgcccggcgagcag cgctcccgcttcctcgccgtcgggctggtggacaacactgtcaggattatttccctcgac ccttcggactgcttgcagccgctgagcatgcaggccctccccgcgcagcccgagtcgctg tgcatcgtggagatgggcggcacggagaagcaggacgagctgggcgagcggggctccatc ggcttcctctacctcaacatcggcctgcagaacggtgtgctgctgcgaactgtgctggac cccgtgacgggtgatctctccgataccaggaccaggtacctgggctcgcggcctgtgaag ctcttccgggtccggatgcagggccaggaggcggtgctggccatgtcgagccgctcctgg ctcagctactcctatcagtcgcgtttccacctgactcccctgtcctacgagaccctggag ttcgcctccggctttgcctctgagcagtgccccgagggcattgtggccatctccacaaac acgctgaggattttggcgctggagaagctgggggcagtcttcaaccaggtcgccttcccc ttgcagtacacaccccgcaaattcgtcattcaccccgagagcaacaacctgatcatcatc gagacggaccacaacgcctacaccgaggccaccaaggcgcagaggaagcagcagatggcc gaggaaatggtggaggctgcgggcgaagatgagcgggagctggccgcggagatggccgca gccttcctgaacgagaacctgccggagtccatcttcggcgctcccaaggcagggaacggg cagtgggcctctgttatcagggtgatgaaccccatccagggaaacaccttggatctggtc cagctagagcagaacgaagccgccttcagcgtggccgtgtgccgcttctccaacacgggc gaggactggtacgtgctggtgggggtggccaaggacctgatcctgaacccgcgctcggtt gctgggggattcgtctacacgtacaagctggtgaacagcggcgagaagctggagttcctg cacaagacccccgtggaggaggttcctgcagccatcgcccccttccaaggacgagtcctg atcggggttgggaagctgctccgtgtgtacgacctgggcaagaagaagctgcttcggaag tgtgagaataagcacatcgccaactacatctgcgggatccagaccatcgggcacagagtg atcgtgtcggacgtccaggagagcttcatctgggtgcgctacaaaaggaacgagaaccag ctcatcatcttcgccgacgacacctacccgcggtgggtcaccacagccaccctcctggat tacgacaccgtggccggagccgacaaattcggcaacatctgcgtggtgaggctgcctccc aacaccaacgacgaggtagacgaggaccccacaggcaacaaagctctctgggaccggggg ctccttaacggggcgtcgcagaaggccgaagtgatcatgaactaccacgtgggagagacg gtgctctcgctgcaaaagaccacgctgatccccggaggctctgaatctctcgtctacacc accttgtcgggggggatagggatcttggtccccttcacttcccacgaggaccacgacttc ttccagcacgtggagatgcacttgaggtcggagcacccccctctctgcgggcgggaccac ctcagtttccgctcctactacttcccggtgaagaacgtgatcgacggggacctgtgcgag cagttcaactcgatggagcccaacaagcagaagaacgtggccgaggagctggaccggacg ccccccgaggtgtccaagaagctggaggacatccgcacgcgctacgccttctga

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