Cygnus atratus (black swan): 118246804
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Entry
118246804 CDS
T09349
Symbol
SREBF2
Name
(RefSeq) sterol regulatory element-binding protein 2 isoform X1
KO
K09107
sterol regulatory element-binding transcription factor 2
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cata03000
]
118246804 (SREBF2)
04131 Membrane trafficking [BR:
cata04131
]
118246804 (SREBF2)
Transcription factors [BR:
cata03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
118246804 (SREBF2)
Membrane trafficking [BR:
cata04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
118246804 (SREBF2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
DUF7196
KH_DTX3L
Motif
Other DBs
NCBI-GeneID:
118246804
NCBI-ProteinID:
XP_035400129
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All DBs
Position
1:43254898..43273937
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AA seq
1115 aa
AA seq
DB search
MEGGELGADGMDTLTELGDELTLGDIDEMLQFVSNQAGDFPDLFSDPLCGTFQGGGSTTT
TSSSSSSGSGTLDPPRPYGQAPLQPFPPPAASPQLQSVQVKVPPQRPAPLLQPRPQLQPQ
LQQQTVMIAPTFSSAPQTRIIQQPVIYQNTATSFQVLQPQVQSLVTSSQVQPVAIQQQVQ
AVQAQRVLTQAAGGTIQTLAPATVQTVAAPQVQQVPVLVQPQIIKTDSLVLTTLKADGNP
VMAAVQNPALTALTTPIQTTALQTLVGSNGTILTTMPVMMGQEKVPIKQVPGGVKQPEPP
KEGERRTTHNIIEKRYRSSINDKIIELKDLIMGTDAKMHKSGVLRKAIDYIKYLQQANHK
LRQENMVLKLANQKNKLLKGIDLSSLVDNDADLKIDDFNQNVLLMSPPASDSGSQAGFSP
YSIDSEPGSPLLDDAKVKDEPDSPPVALGMVDRSRILLCALTFLCLSFNPLTSLLDARGS
PESDSLVRHGSGRSMLTVESDAGGWFGWMMPTLILWLVNGVIVLSVFVKLLVHGEPVTRL
HSRSSVTFWRHRKQADLDLARGDFAAAASNLQTCLSVLGRALPASRLDLACSLSWNVIRY
SLQKLALVRWLLKRTSHQWRAREATAGSEDEAKTSARDAALAYHKLHQLHITGKLPSSSA
YSGLHMALCAVNLAECAEEKIPPSTMAEIHLTAAVGLKTRCGGKLGFLASYFLSQAQSLC
SSERSAIPDSLRWLCHPLGQKFFVERSWTVKSAAKESLYCTQRNPADPIAQVHQAFCENL
LERAVDSLVKPQTRKEVVGQEEEEQCEFSSAMEYLKLLNSFLDSMGSGAPPFASNSVLKS
ALGPDVVCRWWSAAVAMSIGWLRGDDAAVRSHFTEVERVPKSLEISENALVKATFHLCKA
MQASLSGKADGQQSSLGHCERASSHLWNSLNMSSGASSTALSNVIQLLACDLLLSLRTSL
WQKQASSSQALGETYHASASELTGFQRDLGSLRKLAHGFRPAYRKVFLHEATVRLMAGAS
PTRTHQLLEHSLRRRTPQSSKQGELDALPGQRERATAILLACRHLPLSFLSSPGQRAVLL
AEAARTLEKVGDKRSCNDCQQMIVKLSGGTAIAAS
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atggagggcggcgagctgggcgccgacggcatggacacgctgacggagctgggcgacgag
ctcacgctgggcgacatcgacgagatgctgcagtttgtcagcaaccaggcgggggacttc
ccggacctgttttcggatcccttgtgcggcaccttccagggcggcggcagcaccaccacc
accagcagtagcagcagcagtggcagcgggaccctggaccctccgcgcccatacggccag
gcgcccctgcagcccttcccaccgcccgccgcctccccgcagctgcagagcgtccaggtg
aaggtccccccgcagcgcccggcgccgctgctccagccccggccccagctccagccgcag
ctccagcagcagacggtgatgatcgccccgacgttcagctccgctccccagaccaggatc
atccagcagcccgtcatataccagaacacagccacgagttttcaagtcctccagcctcag
gtgcagagcctggtgacgtcctcgcaggtgcagccggtcgccatccagcagcaggtgcag
gcggtgcaggcgcagcgcgtgctgacgcaggctgccggcggcaccatccagacgctggcg
ccggccacggttcagacggtggctgcgccgcaggtccagcaggtcccagttctggtccag
ccccagatcataaagacggactccctcgtcttgaccaccctgaaggcggatggcaatccc
gttatggctgcggtgcagaatccagcgctcacagcgctcaccactcctattcagaccaca
gctctgcagaccctcgttgggagcaatgggaccattctgaccacaatgccagtgatgatg
gggcaagaaaaggtgcctatcaaacaagttccagggggagtcaagcaaccagaaccacct
aaagaaggagagaggagaacaactcacaacatcattgagaagcgttatcggtcgtctata
aacgataagatcattgagctgaaggacctcattatggggacagatgccaagatgcacaag
tctggtgtcctgcgaaaagccattgattacattaaatatctgcaacaggccaaccataaa
ctgagacaggagaacatggttctgaagctggctaaccagaaaaacaagctgttgaagggc
attgacctaagcagtctggttgataatgatgcagacctgaagatagatgacttcaaccag
aatgttctcctgatgtctcctccggcctctgactcgggatcccaggctggcttctctccc
tattccatcgattcagagccaggaagcccactgcttgatgatgcaaaggttaaagatgag
cctgactctcctcctgtggcccttggtatggtggaccgctctcgaatcctcctctgtgcc
ctcacgttcctgtgcctctccttcaaccctctaacgtcccttctggatgcccgaggaagc
ccagaatctgacagcctcgtgcgccacggctctggcaggagcatgctgaccgttgagtca
gacgccggcgggtggtttggctggatgatgcccacgctgatcctgtggcttgtgaacgga
gtgattgtcctgagcgtgttcgtgaagctccttgtgcacggagagccggtgacccgcttg
cactcgagatcgtcggtcaccttctggaggcaccgcaagcaggcagacctggatttggca
cggggggatttcgctgcagcggcgtcgaacctgcagacctgcctgtcggtcctgggccga
gcgctgccggcttcccgcctggacctggcgtgcagcctgtcgtggaacgtgatccgctac
agcctgcagaagctggcgctggtgcggtggctgctgaagaggacctctcatcagtggcgg
gccagggaggccacggcgggctctgaggacgaggccaagaccagcgctcgggatgcagct
ctagcctatcacaagctccaccagctccacataacaggtaaacttccctccagctccgct
tactctggcttgcacatggccttgtgcgctgtgaatctggccgagtgcgcggaagaaaag
atcccccccagcaccatggccgaaatccacctgacggccgccgttggcttgaagacccgc
tgtgggggcaagctgggcttcctggcgagctacttcctgagccaagctcagagcctgtgc
agctcggagcgcagcgccatccctgactcgctgcgttggctgtgccaccccctgggacag
aagttttttgtggagcgaagctggacggtgaagtctgctgccaaggagagcctgtactgc
acccagaggaaccctgcggatcccattgcacaagttcatcaggcgttttgtgagaacctg
ctggagagagctgtggattcacttgtgaaacctcagactaggaaagaggtggtgggccaa
gaggaggaggaacagtgtgagttctccagcgcgatggagtacctgaaattgctcaactct
ttcctggactcaatgggaagtggagcaccaccctttgccagcaactctgtgctcaagtca
gccctgggcccggacgtggtgtgcaggtggtggtcggcagcagttgctatgtcaatcggc
tggctcagaggggacgacgcagctgtgaggtcacatttcacagaagtggagcgcgtgccg
aaatccctggagatatcagagaacgccctggtgaaagccaccttccacctgtgcaaagcc
atgcaggcctcgctgtcggggaaggcggacgggcagcagagctcgctgggtcactgcgag
agggccagcagccacctgtggaacagcctgaacatgagcagcggcgcctccagcaccgcc
ctcagcaacgtgatccagctgctggcctgcgacctgctgctgtccctccgcaccagcctg
tggcagaagcaggcgagcagcagccaggctctgggcgagacctaccacgcctcggcctcc
gagctcaccggcttccagcgggacctcggcagcctgcgcaagctggcccacggcttcagg
cccgcgtaccgcaaggtcttcctccacgaggccaccgtgcgcctgatggcgggggccagc
cccacgcgcacccaccagctgctggagcacagcctccggcgccgcacgccccagagcagc
aagcaaggcgagctggacgcgctgccggggcagagggagcgagccacggccatcctgctg
gcctgccgccacctcccgctctccttcctctcgtcacccggccagcgcgccgtcctgctg
gccgaggccgcgcgcaccctggagaaggtgggggacaagcgctcgtgcaacgactgccag
cagatgatcgtcaagctcagcgggggcacggccatcgccgcctcctaa
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