Cygnus atratus (black swan): 118246807
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Entry
118246807 CDS
T09349
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cata03009
]
118246807
03036 Chromosome and associated proteins [BR:
cata03036
]
118246807
Enzymes [BR:
cata01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118246807
Ribosome biogenesis [BR:
cata03009
]
Eukaryotic type
Pre-60S particles
Helicases
118246807
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
118246807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
AAA_22
UTP25_NTPase-like
Bdbt-like_TPR
Motif
Other DBs
NCBI-GeneID:
118246807
NCBI-ProteinID:
XP_035400140
LinkDB
All DBs
Position
7:complement(25521878..25533582)
Genome browser
AA seq
790 aa
AA seq
DB search
MGGVWGRAARLGFPAASRAAAPSCGRRRGLCWAAAARPGPLLLLAAALPRGPAARCWAPP
FLRAGAGRGSWCCPAGARSTAELCGERPAAMPAAGPAASPGEPQAPADAEPIRRGRRRKA
KDESTEKKPKRREKLKRRGKAEGEQAQPEESGLGDGDLQPPLPKKAKKRQKSNGVAEESS
TMGLGKSSSALSDGEAAQSVSDEVVDGEHNGDSEELTEEAREGAFSNFPLSKNTINLLKA
RGVTYLFPVQAKTFQPIYDGKDLIAQARTGTGKTFSFAIPLTEKLQSVTQDERRGRSPKV
LVLVPTRELAIQVARDFKNLTKKLSVACFYGGTPYKAQFDLLKIGIDILVGTPGRIKDHI
ENSKLDLSNVKHVVLDEVDHMLDMGFAEQVEEILGFAYKKGSENKPQTLLFSATCPRWVY
DVAKKYMKDEYEQVDLIGKKTQRTATTVEHLAIQCRSSQRAEVLGDIIQVYSGSRGRTII
FCETKKEANELALNSSLKQDAQSLHGDIPQKQREITLKGFRNGVFEVLIATNVAARGLDI
PEVDLVIQCSPPKDVDSYIHRSGRTGRAGRTGICICFYQRREEDLLKQVEQKAGITFKRI
GVPSATDIIKASSNDAKKCIEAIPPFAIDYFRQSARELIAEKGAVDALAAALAHISGASS
IQQRSFLNSTAGFVTMVLKCSIEMRTMSYAWRGLKEQLGEEVDDKISAMRFLKGKMGVCF
DIPVNELNHIQERWQDTRRWQLTVAKELPELEEQPQEASRGPARFGDGGFKRNGKFNSRS
WGQRFNKSSD
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcgtgtggggccgcgctgcccgcctcggcttccctgcagcctcccgggcggcg
gctccgagctgcggccggcggcggggactgtgctgggcggccgcggcccggccgggcccg
ctgctgctgctggcggcggcgctgccccgcggcccggccgcccggtgctgggcgcctccc
ttcctgcgcgccggggcggggcgcggctcctggtgctgccccgctggagcccgatccact
gccgagctgtgcggggagcgtcccgccgccatgcccgccgccggccccgcagccagcccc
ggagagccgcaggcgcctgcggacgccgagccgatccgccgcggccgcaggaggaaggcg
aaggatgagagcacagagaagaagccgaagcgccgggagaagctgaagcgccgtggcaag
gctgagggcgaacaggctcagcctgaggagagcgggctgggcgatggcgacctgcagccc
cccctgcccaagaaggcgaagaagcggcagaaaagcaacggtgtggctgaggagagcagc
accatggggttgggcaagtcttcctcggctttaagtgatggcgaggcagcacagagcgtg
tccgacgaagtggtggatggagagcacaacggtgactcagaggagctgacagaggaagca
agagaaggtgccttctccaattttcctctttccaaaaacaccatcaaccttctcaaagct
cgaggtgtaacatacctgttccctgtgcaagcgaagacttttcagcccatatatgatggc
aaagacctaattgctcaagctcggacgggaaccgggaaaaccttttcttttgctattccg
ctgactgaaaaacttcagagtgtcacgcaagatgagagaagaggacgttcaccaaaagtg
ttggttcttgttccaacaagggaactggccattcaggtagccagagacttcaagaatctc
acaaagaaactgtcagtggcttgtttttatggaggaactccatataaagcacagtttgat
ctccttaaaattggcattgatattctagtgggaactcctgggcggatcaaagaccacatt
gagaatagcaagctggacctttccaatgtgaagcatgttgttttagatgaagttgatcac
atgttagacatgggctttgccgagcaagtagaagaaatcttaggatttgcttataaaaaa
ggttctgagaacaaacctcagacgctgctgttctctgcaacttgtccacgctgggtgtat
gacgttgcaaaaaaatacatgaaagacgaatatgaacaggtagacctgattggcaagaag
acccagaggactgccaccactgtggaacatttggctatacagtgtcgctcgtctcagaga
gcagaagtccttggggatatcattcaagtctacagtggaagccgtgggcgaactatcatc
ttctgtgagaccaaaaaggaggcaaacgagttggctttgaattcttctctcaaacaggat
gcccagtcattgcatggtgacattccacagaaacagagggaaattaccttaaagggcttt
agaaacggtgtgtttgaagttctgattgcaaccaatgtagctgcccgtggtttggatatt
cctgaagttgacctggttatacagtgctcaccaccaaaagatgttgattcctacatccat
cgttctggacgcacgggtcgagctggccggactgggatctgtatttgtttctatcagaga
agagaagaagaccttctgaaacaggttgagcagaaagcggggattacgtttaagcggata
ggtgttccatctgctacagatataattaaagcgtcaagtaatgatgccaaaaagtgtata
gaggccattcctccttttgcaatagactacttcagacagtcggctcgagagctcatagcg
gaaaaaggagcagttgatgccctggcagcagctctagcccatatttctggagcatcttcc
atacagcagcgctcgtttctcaactcaactgcgggctttgtgaccatggtgttaaagtgc
tcgattgaaatgcgtaccatgagttacgcctggagagggctaaaagaacagcttggtgaa
gaagtagatgacaaaatatctgcaatgcgcttccttaaggggaagatgggggtgtgcttt
gatatccctgttaacgaactgaatcacatacaggagcggtggcaggacacccggcgctgg
cagctgacggtggcaaaggagctgcccgagctggaggagcagccccaggaggcgagccgg
ggacccgccaggttcggggacggcggtttcaagcgcaacggcaagtttaacagcaggagc
tggggacagcgcttcaacaagtcgtccgattaa
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