Cygnus atratus (black swan): 118247002
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Entry
118247002 CDS
T09349
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cata04040
]
118247002 (TRPC1)
Ion channels [BR:
cata04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118247002 (TRPC1)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
Dsc3_C
MTR4-like_stalk
LHD_TRPY1
RIN1
Motif
Other DBs
NCBI-GeneID:
118247002
NCBI-ProteinID:
XP_035400545
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Position
9:complement(2144470..2167027)
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AA seq
782 aa
AA seq
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MAALYQSADPSASASPNKLLALKDVRQVKEETTLDEKLFLLACDKGDYYMVKKLLEENSS
GEMNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSSDALLVAIDSEVVGAVDILLNH
RPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDISLPKPHAVG
CECTLCTAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEV
EFRNDYEELAQQCKTFAKDLLAQARNSRELEVILNHTSSDEHVDKRGLLEERMNLSRLKL
AIKYNQKEFVAQSNCQQFLNTVWFGQMAGYRRKHTCKKILTVLMVGIFWPVLSLCYLLAP
KSRVGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNENKKNTMGPALERIDYLLIIWLI
GMVWSDVKRLWYDGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHDYAERKDWDAF
HPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLFSFT
IGLTQLYDKGFTVNEEERDCAGIFCEKQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRF
SYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSY
FDDKCTLPPPFNVIPSPKTICYLFNSLSKWICSHTSSGKVKRQNSLKEWRNLKQKRDENY
QKVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEMRDLLGFRTSKYAMFYP
RN
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggccgccctgtaccagagcgcggacccgtccgcctcggcctcgccgaacaagctgctg
gcgctgaaggacgtgcggcaggtgaaggaggagaccaccctggacgagaagctattcctc
ctggcctgcgacaaaggtgactactacatggttaagaaactcttagaggaaaacagctca
ggtgaaatgaacataaactgtgtggatgtgcttggaagaaatgctgttaccataaccatt
gaaaatgaaaatttggatattctacagcttcttctggattatggctgccagtcatcagat
gcacttttggtggctattgactcagaagtggtgggagctgttgacattctacttaatcac
cggccaaaaagatcttccagaccaaccattgtaaaactaatggaacgcattcaaaaccca
gagtactcaacgaccatggatgtggcacctgtcattttagctgctcatcgtaataactat
gaaattctcaccatgctgttaaagcaagatatatcactacccaaacctcacgctgtaggc
tgtgaatgcacgctctgtactgcaaaaaacaaaaaagatagtctgcgacattccaggttt
cgtcttgacatttaccggtgtttggccagtcctgctttaataatgttaacggaggaggat
ccaattctgcgagcttttgaacttagtgcagacttgaaagaattaagtcttgttgaggtt
gaattcagaaatgattatgaggagctagctcaacagtgcaaaacctttgctaaagatttg
ctcgcacaagcacggaattcacgggagctagaagttattctgaatcatacatctagtgat
gaacatgtagacaagcggggattgttggaagagaggatgaacttaagtcgcttaaaactg
gcaatcaagtataatcaaaaagagtttgttgctcagtctaactgccagcagtttcttaac
actgtgtggtttggacagatggcaggctatcgacgcaagcatacgtgcaaaaaaattttg
actgttttgatggttggcattttctggccagttctgtccctgtgttacttattagcccct
aaatctcgagtaggtcgaataattcacactccttttatgaagtttattattcatggagct
tcatatttcacatttcttttattacttaatttgtactccctcgtctataatgagaataag
aagaatacaatggggccagcccttgagagaatagactatcttctgataatatggctaatt
ggaatggtgtggtcagatgttaaaagactctggtatgacggtttagaagactttttagaa
gagtcccgtaatcagcttagttttgtcatgaattccctgtatttggcaacttttgctctg
aaagtagttgcccataacaagtttcatgattatgctgaaagaaaggattgggatgcattc
catcctacattagtggcagaaggtctttttgcttttgctaatgttctaagttacctacgt
ctgttcttcatgtacacaaccagctctattctgggaccactccagatttcaatgggacag
atgctgcaagattttggaaaatttctgggcatgtttcttcttgtcctgttctcattcacg
attggattgacacagctttatgataaaggatttactgtaaatgaagaagaacgggactgt
gcagggattttctgtgagaaacagagcaatgacacattccattcgtttattggcacctgt
tttgctctgttctggtatatcttctcgctggcacatgtagcgatctttgtcacgcgcttt
agctatggtgaagaattacagtcgtttgtgggggctgttattgttggtacctacaacgtg
gtggttgtgatagtattaactaaactccttgtggcaatgcttcataaaagttttcagctg
atagcaaatcatgaagataaggaatggaaatttgctcgtgccaagctttggcttagctac
ttcgatgacaaatgcacactacctccacctttcaatgttattccatctcccaagactatc
tgttatctcttcaacagtctcagtaaatggatctgttctcacacatcaagtggcaaagtg
aaacgtcagaatagccttaaggaatggagaaatctgaagcagaagagagatgagaattat
caaaaggtgatgtgctgcttagtccaccgttacttgacatccatgagacagaagatgcaa
agcacagatcaggcaactgtggaaaacctaaatgaactgcggcaagacttatcaaaattc
cgaaatgagatgagagacctacttggctttcgaacttctaaatatgcgatgttttatcca
agaaattaa
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