Cygnus atratus (black swan): 118247085
Help
Entry
118247085 CDS
T09349
Symbol
MMS19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cata03036
]
118247085 (MMS19)
03400 DNA repair and recombination proteins [BR:
cata03400
]
118247085 (MMS19)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
118247085 (MMS19)
DNA repair and recombination proteins [BR:
cata03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
118247085 (MMS19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
RIX1
Motif
Other DBs
NCBI-GeneID:
118247085
NCBI-ProteinID:
XP_035400687
LinkDB
All DBs
Position
7:complement(14920867..14934196)
Genome browser
AA seq
968 aa
AA seq
DB search
MCEVLAPGLAVSVLKAIFQEVHVQSLLQLDRHTVYSIITNFMVTREEELKGLGADFTFGF
IQVMDGEKDPRNLLVAFQIVRDLIAKNYALGPFVEELFEVTSCYFPIDFTPPPNDPHGIQ
REDLILSLRAVLASTPQFAEFLLPLLIEKMDSDLQSAKLDSLQTLTACCAIYGQKELQEF
LPSLWSSLRREVFQTASEKVEAECLTALHALSACLSRSVLSSDAEDLLDSFLSSVLQDCR
HHLCEPDMKLVWPSAKLLQAAAGASLRTYQRLTHSVLPLLLEQYTKHSQSSQRRTILEML
LGFLELQRKWGHVEEDESALLSLRAPVCSVVFSALTDPSVQLQLVGIRALTVLGSLRGFL
SPSDLELVVDHLIRLALHEEDSQSSEAAMEAAGSLAPIYPAVFSGRMVPRLGEELRSERD
EERSLDLRSLRQRCLQALAAVSTHTSIVRETVPVLLQHLRKVQKGSEAGSAQEVVSACQS
LHRVALRCQQDAEGCWYFHQAAVPCLLAVAVLAATRGRRGAGAPAGAAAAPWGPAERCCC
HPPAGAGTAGPAAPCQRQSCGGQRHVPFPLLSAESAHPLLGKALLEEDVLAAMVPVISAA
TTHLSPERAAQSVSHVVPLFLDGEVSFLPQNSFPCSFQPFAEGECLEAQRRLVALLMAFV
CSLPRNVAIPQQERLLRELLALSCSCNCPFTATTAAKCFAGLVNKHPAGQQLDEILQLAV
NRMEPGLAEGPRRVQALTLLLWVTKALVMRYHPLSSHLTDKLLGLLGDVELGPAAADGFS
LLMAESPDVLHKGCHADVRIMFRQRFFTDNVPKLVQGFHGAGPDVKANYLKGLSHVLNHL
PKPVLVTELPTLLSLLLEALSCSDRVVQLSTLSCLQPLLLEAPQIMSLHVDTLVTKFLSL
TSSPAMAVRIAALRCAHALTSLPTIVLLPYKARVIRALAKPLDDKKRLVRKEAVAARGEW
FLVGSPGR
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaggtactagccccagggctagcagtatccgtgctcaaagccatcttccaggag
gtgcacgtgcagtccctgctgcagctggaccgccacacagtctacagcatcatcaccaac
ttcatggtcaccagggaggaagagctgaagggcctgggtgctgacttcacctttggcttc
atccaggtgatggatggcgagaaggatccccgcaacctgctggtggccttccagatcgtg
cgcgatctcattgccaagaactatgccctgggtccctttgtggaggagctgtttgaagtg
acgtcctgctacttccccattgattttactccaccccccaacgaccctcatggcatccag
agagaagacctgatcctaagccttcgggctgtcctggcctccacgccccagtttgctgag
ttcctgctccctctgctcattgagaagatggactcagacctgcaaagtgccaagctcgac
tccctgcagactctgactgcctgttgtgccatctacgggcagaaggagctgcaggaattc
ctccccagcctctggtcatccctgcgcagggaggtgttccagacagccagcgagaaggtt
gaggcagagtgcctgaccgcgctgcacgccctctccgcctgcctctcccgctccgtgctc
agctcagacgccgaggacctcctggactccttcctcagcagcgtcctgcaagattgcagg
caccatctgtgcgagcccgacatgaagctggtgtggccgagtgccaaactcctgcaggca
gcagcgggcgcctccctccgcacctaccagcgcctcacccacagcgtgctgcccctgctg
ctggagcagtacaccaagcactcgcagagcagccagaggaggacaatcttggaaatgctg
ctgggcttcctggagctgcagcggaagtggggacatgtggaagaagatgagagtgcgctg
ctgtccctccgagccccagtttgctctgtggtgttctcagcgttgacggaccccagtgtg
cagctgcagctggttgggatcagggcgctgaccgtcctgggctccctgcgaggcttcctg
tctccctctgacctggagctggttgtggatcacctcatccggctcgctctgcacgaggag
gattcccagagcagcgaagcggcgatggaggcagctggatctctggcccccatctaccca
gcggttttctccgggcgcatggtgcccaggctcggggaggagctgcggtcagagcgggac
gaggagaggtccctggacctccgctctctgcggcagcgctgcctgcaggccctggcagct
gtgtccacacacaccagcatcgtgagggagaccgtccccgtcctgctgcagcatctccgg
aaggtgcagaaagggagcgaggccggcagcgcccaagaggtggtctccgcgtgccagagc
ctgcaccgcgtggccctgcggtgccagcaggacgcggagggctgctggtacttccaccag
gcggcggtgccctgtctgctggccgtggccgtgctggctgccacgcgaggtaggcgcggc
gctggagccccggcgggggcggcagcggctccctggggccctgcggagcgctgctgctgc
cacccgccggcaggcgcgggcaccgcgggccctgctgccccctgccagaggcagagctgc
ggtgggcagcgccacgtccctttccccctgctgtctgcagagagcgcccacccgctcctg
ggcaaggcgctgctggaggaggacgtgctggctgccatggtccccgtgatcagcgctgcc
accacccaccttagccctgagcgggctgcccagagcgtgtctcacgtggtgcccctcttc
ctggatggagaggtttccttcctgccccagaacagtttcccttgctccttccagcccttt
gcggagggggagtgcttggaggcacagagacgcctggtcgccctcctcatggccttcgtt
tgctccttgcctcgcaacgtggcaatccctcagcaggagcggttgctccgggagctgctg
gcgctgagctgctcctgcaactgccccttcacggccaccacggccgccaagtgcttcgcg
gggctggtgaacaagcacccagcggggcagcagctggatgagatcctgcagcttgcagtg
aacaggatggagcctggccttgcagaggggccccgccgagtgcaggcgctcaccctgctg
ctctgggtgaccaaagccctggtgatgcgctaccaccccctgagctcccacctgacggac
aagctgctgggcctgctgggcgacgtggagctgggccccgctgcggccgatggcttctcc
ctgctcatggccgagtccccggacgtgctgcacaagggctgccacgccgacgtgcgcatc
atgttccgccagcgcttcttcactgacaacgtgcccaagctggtgcagggcttccacggg
gctggccccgacgtgaaggccaactacctgaaggggctgtcccacgtgctcaaccacctt
cccaagcccgtgctggtgacagagctgcccacgctgctttccctcctgcttgaggccttg
tcctgctcggaccgcgtggtgcagctctccaccctgagctgcctccagccgctgctgctc
gaagctccccagatcatgagccttcacgtcgacacgctggtcaccaagttcctcagcctc
acctccagccccgccatggctgtccgcatcgctgccctgcgctgcgcccacgcgctcacc
agcctgcccacaatagtgctgctcccctacaaggccagagtgatccgggcgctggccaag
cctttggatgacaagaagaggctggtgcggaaggaggcggtagcagcacggggggaatgg
ttcctggtggggagcccgggcaggtga
DBGET
integrated database retrieval system
