Cygnus atratus (black swan): 118247170
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Entry
118247170 CDS
T09349
Symbol
SNED1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cata04990
]
118247170 (SNED1)
Domain-containing proteins not elsewhere classified [BR:
cata04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
118247170 (SNED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_2
EGF_CA
Ig_DSCAM-DSCAML_C
Fn3_Dep-1_4th
EGF_3
cEGF
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
118247170
NCBI-ProteinID:
XP_035400832
LinkDB
All DBs
Position
9:11659473..11681139
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AA seq
1445 aa
AA seq
DB search
MRVLRGCCVVLLALGEWLRAGGVVPLADFYPFGPAQGDAATLKQDDGGSELRPLSVRFPF
FGAGHTGLYVNNNGIISFLKEVSQFTPVAFPISKDRRVVAAFWADVDNRRAGDVYYRESR
DQAILERATRDIAQYFPEFPDFSAQWVFIATWYRVTFFGGSSFSPVNTFQIVLITDGKLS
FTIFNYESITWTTGMHASSGGDFAGLGGIAAQAGFNAGDGKRYFNIPGSRTDDIADVEMT
TNVGIPGRWVFRIDDAQVQVGGCSNTTSVCLTLRPCLNGGKCIEDCITGNPSYTCSCLAG
FTGKRCHVDVDECLSHPCQNGATCISGVNSFSCRCLPGFRGASCEMEELPCETKVCQNGG
TCQETNGTAACVCQPGYAGGDCETEVNECESSPCLNGGHCVDLVDNYTCVCLEPFVGQRC
EIDPSSCEDRSCRNRQTCNYIRPGRYICTCSPGYYGNNCQYGGPRVPGACLSSPCQNGGS
CLELEQGYACDCQEGYSGQDCRDKLSEGCECRNGGSCLEGNVTICQCLPGYFGLLCEFEV
TATPCNVNTQCPDGGYCMEYGGSYLCVCHTDYGTNHTVPSPCDSEPCLNGGSCEAQDDSY
TCECPPGYLGKHCERARPRLCSTAPCRNGGTCKESDGEYHCTCPYRFTGRHCEIGKPDPC
ASGPCQNGGTCFHYIGKYKCDCAPGYAGRHCEIVPSPCFLSPCENGATCEDLGGDFVCTC
PVGYTGKHCRTEIDCGVPSAVKHAQASFNSTTVGSLAEYRCELGYALSQHNSPRVCHSQG
IWSDPPECDEIDECRSQPCLNGGQCKDRIAEFLCVCEPGYVGHHCELEVDECQSEPCKNG
GTCRDLPGSFVCFCPEGFVGIQCEEEVDACESGPCQNGGECEGYRGSYLCVCPEGFFGYH
CETASDPCFSSPCGSRGYCLPSNGTHSCTCKVSYTGKSCEKELLPPTSLKVERVEDTGVL
ISWHPPEDAAARQLIDGYAVTYVSFDGSYRRTDFVDRSRSAHQLRALASGRAYNISVFSV
KRNVNNKNDISRPVMLTTRTRPRPVEGFEITNVTASTITVQWALHRLKHSTVSRVRVSIR
QPGDLEDRTVELNSSVAKYTFLDLQPGERYIVHVTTLSGLGTEDHPSESLATAPFHVWTR
PLPPRNLTASRVTPTSVSVTWEQPPAGTVEGYIINVTTLQSVKSRYVPNGKLASYTVRDL
LPAQRYRLSVTAVQNTEQGQVHSEPIHLYVTTLQRDGAPERRWSQAGHPRVLRNRLPPAF
LPELRLLADHDTAEEPSPAPRFTELVDGRGRISARFGTLLSRSITVKTQPEAPMKLENIE
EPARGSLALQLHEAQSKSTGQNCSANPCKNGGTCVSESESYHCDCSPGFKGRHCELACKK
VPHSCTRLYSETKSFPVWEGGTCHYLYKRVYKVHQDVCYKESCESTGSKKPSSRKQSDSH
TLKKP
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgctgcggggctgctgcgtcgtgctgctggcgctgggcgagtggctgcgggcg
ggcggcgtggtgccgctggccgacttctacccgttcgggccggcgcagggcgacgccgcc
acgctcaaacaggacgacggcggctccgagctgcggccgctctccgtgcgcttccccttc
ttcggagcggggcacaccgggctctacgttaacaacaacgggatcatctccttcctgaag
gaggtctcccagttcacgccggtcgccttcccaatctccaaggaccggcgcgtggtggca
gctttctgggcagatgtggacaaccggcgggcgggcgatgtgtattaccgggagagccga
gaccaggccattctggagcgggcgaccagggacatcgcgcagtatttccccgagttcccc
gatttctccgcgcagtgggtgttcatcgctacctggtaccgggtcaccttcttcggggga
agttcgttttcaccggtaaacactttccagattgtcctcatcacggatggcaagctgtcc
ttcaccatcttcaactatgagtccatcacctggaccacgggtatgcacgccagcagtggg
ggggactttgctgggcttggcggcatcgcagcgcaggcaggttttaacgccggtgatgga
aagcgctacttcaacatccctggatcccgcaccgatgacatcgctgacgtggagatgacg
acaaatgtgggtatccccgggcgctgggtgttcagaatcgatgatgcccaggtgcaagtg
gggggctgcagcaatacaacctccgtgtgcctgacgctgcggccctgcctgaacgggggg
aagtgcattgaggactgcatcacggggaacccctcctacacctgctcctgtctcgcaggc
ttcacggggaagaggtgccacgtcgacgtggacgagtgtctctcccacccgtgccagaac
ggagccacctgcatcagcggcgtcaacagcttcagctgccggtgcctgccgggcttcaga
ggtgccagctgcgagatggaggagttgccgtgcgagaccaaggtgtgccagaacggcggg
acgtgccaagagacaaacgggacggcggcatgcgtgtgccagccggggtacgcgggagga
gactgcgagacagaggtgaacgaatgcgagtccagcccttgcctgaacggagggcactgt
gtcgacctggttgataactacacgtgcgtgtgcctggagcccttcgtgggacagcgctgc
gagatagacccctcctcctgcgaggaccggagctgcaggaaccgtcagacgtgcaactac
atccgcccgggacgctacatctgcacgtgctccccgggctattacggcaacaactgccag
tacggtggcccccgggtacccggcgcctgcctctccagcccctgccagaacgggggcagt
tgcctggagctggagcagggctatgcctgcgactgccaggagggctacagcgggcaggac
tgccgtgacaagctctctgagggctgcgagtgtcgtaacggaggcagctgcctggagggg
aacgtcaccatctgccagtgcctgccggggtatttcggtctcctctgtgaattcgaggtg
accgccacgccgtgcaacgtgaacacgcagtgcccagacggcggctactgcatggagtat
ggtgggagctacctgtgcgtgtgccacaccgactacggcaccaaccacacggtaccttcc
ccctgcgactccgagccctgcctgaacggggggtcctgcgaggctcaggacgactcctac
acctgcgagtgtcccccgggctatctggggaagcactgcgagagagcccggccgcggctc
tgcagcacggcgccgtgccgcaacgggggcacctgcaaggagtccgatggcgagtaccac
tgcacctgcccctaccgcttcaccggccggcactgtgagataggtaagccagacccctgc
gcctcggggccctgccagaacgggggcacctgcttccactacatcggcaagtacaagtgc
gactgcgccccgggctacgccggacggcactgcgagatcgtgccgtctccctgctttctg
agcccatgtgagaacggtgcgacctgcgaggacctcggcggggactttgtgtgcacgtgt
cccgtgggctacaccgggaagcactgccggacggagatcgactgcggcgtgcccagcgcg
gtgaagcacgcccaggcctccttcaactccaccacagtgggctcgctggctgaataccgc
tgcgagctgggctatgccctcagccagcacaacagcccccgtgtctgccactcgcagggc
atctggagtgacccccccgaatgcgacgagatcgacgagtgccggtcccagccttgcctg
aatggcggtcagtgcaaggaccgcatcgctgagttcctgtgcgtgtgcgagccaggatac
gtgggccaccactgtgagttggaagttgatgaatgccagtcagagccctgcaagaacggc
gggacctgccgggacctcccaggctcttttgtttgcttctgtcccgagggcttcgtgggg
atccagtgtgaggaagaagtggacgcctgcgaatctggcccgtgccaaaacggaggggag
tgcgaaggctaccgaggctcctacctgtgtgtgtgcccggagggtttcttcggttaccat
tgcgagacagccagcgacccgtgcttctccagcccgtgtgggagccgaggctactgcctg
cccagcaacggcacccacagctgcacctgcaaagtgagctacacaggcaagagctgcgaa
aaagaattgctgccaccaacctcattaaaggtggaaagggtggaggacactggtgtgttg
atttcttggcacccgcctgaggacgcagccgccaggcaactcattgacggctacgccgtg
acgtacgtatccttcgacggctcttaccgcaggacagattttgtggaccgaagtcgttct
gcccaccaattgcgggcactagcctccggcagagcctacaatatttctgtcttttcagtc
aaacgcaacgtgaacaacaagaatgatatcagcaggcctgtcatgctcaccacgcgcact
agaccgcgtccggtggaaggctttgagatcacgaacgtgacggccagcaccatcacggtg
caatgggctctccaccggctcaagcactccactgtcagtagggtgcgtgtctccatccgc
cagcctggggacctggaagaccgcacggtggagctgaacagcagcgtggccaagtacacc
ttcctggacctgcagccaggagagcgctacatcgtccatgtcaccacgctgagcggcctg
gggacagaagatcacccctcggagagcctggccacggcccccttccacgtgtggacgagg
cctctcccccctcgaaacctcacagcctcgcgcgtcacccccacctccgtgtccgtgacg
tgggagcagccgcccgctggcaccgtggaggggtacatcatcaacgtcaccaccctgcag
agcgtcaagagccgctacgtgcccaacggcaagctcgcgtcctacaccgtgcgggacctg
ctgcccgcgcagcgctaccgcctctccgtgacggccgtgcagaacacggagcaggggcag
gtgcacagcgagcccatccacctctacgtcaccaccctgcagagggatggggctccggag
aggcgctggagccaggctggacacccccgggtcctgcgcaacaggctgcccccagccttc
ctgcccgaactccgcttgctcgcagaccacgacacggctgaggagccctccccagccccc
aggttcactgagctggtggatggcagagggagaatcagcgccaggttcggcactttgctg
agcagatccatcaccgtgaagacacagccagaggctcccatgaagctggagaacatcgag
gagcctgcccggggcagtctggcgctgcagctgcacgaggcacagagcaagagcaccggg
cagaactgctctgcaaacccctgcaagaacggaggcacctgtgtgagcgagagcgagtcc
taccactgcgactgcagcccgggcttcaagggcaggcactgcgagctggcctgcaagaag
gtgccacactcgtgcacgcggctgtactcggaaaccaagtcattccccgtgtgggaagga
ggcacctgccactacctgtacaagagagtctacaaggtacaccaggatgtctgctacaag
gagagctgcgagagcaccggttccaagaagccaagcagcagaaaacaaagcgacagtcac
acactgaagaagccatag
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