Cygnus atratus (black swan): 118247221
Help
Entry
118247221 CDS
T09349
Symbol
TSPEAR
Name
(RefSeq) thrombospondin-type laminin G domain and EAR repeat-containing protein isoform X1
KO
K24437
thrombospondin-type laminin G domain and EAR repeat-containing protein
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cata03037
]
118247221 (TSPEAR)
04990 Domain-containing proteins not elsewhere classified [BR:
cata04990
]
118247221 (TSPEAR)
Cilium and associated proteins [BR:
cata03037
]
Other cilia and associated proteins
Stereociliary proteins
118247221 (TSPEAR)
Domain-containing proteins not elsewhere classified [BR:
cata04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
118247221 (TSPEAR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EPTP
Laminin_G_1
Laminin_G_2
Beta-prop_At4g14310
Motif
Other DBs
NCBI-GeneID:
118247221
NCBI-ProteinID:
XP_035400926
LinkDB
All DBs
Position
9
Genome browser
AA seq
675 aa
AA seq
DB search
MSASLLLWAVLLHWASGGGLARGGRTWQHCTDLRPLDILSEVVPAGGLARGLRVFQVQGV
RGLQLAAAWPRALGFPASRLFVHCDRFPEEFSIIVTLRVLDVPAKRNEYIFTLMAEESPS
VLVGLRYAPSKLHFLFWSQERSSGWQTRVTFRNVSLADSRWHTLVLAISGQSFSLTVDCS
SPKDVVVETPFPASLSVKRARFYLGNRRRRKGLFTGLLRQLVLLPGADATPRICPAANFE
AATLSIPAVLQDVPVKSASNEVLKYPYETDMKVTLGSRPPCTKQEKAQFWFNAPRRGLYL
CDGSTWISMLEAKQRLDYVEEHQSLVTNSETMGIEVFTIPKVGLFAATANRYTPPGSAIY
KWTDGKFVPYQNIPTYQAQSWKYFTIGKKIFLAVANFEQNDRGQEFSVIYKWSHRKEKFI
THQRITTHSARDWEAFVIEGEAFLAVVNHREGNNHNIDSVIYRWNPQTGLFETNQTIPTS
GAYDWEFFTIGPYSFLAVANTFNGTSTKIYSHIYIWLRGSFQLFQSILTFGAADWEVFHI
GDRVFLAVANSHSYDSGMPVPSNFYAINSSIYELNVTAQMFVKFQDLLTYSALDWEFFSM
GDDSFLVVANSFDGFTFSVNSIIYRWQGYEGFVAVHHLPTVGCRDWEAFNTTEGSYLIYS
SAKEPLSKVLKLKTT
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcctcgctgctgctctgggccgtcctcctccactgggcctccggcgggggcctt
gctcggggcggcaggacgtggcagcactgcacagacctgcgcccgctggacatcctctcg
gaggtggtgccggccggcggcctggcccgcggcctgcgggtgttccaagtgcagggggtg
cgcggcctccagcttgccgccgcctggccccgggccttgggcttccccgcctcgcgcctc
ttcgtccactgcgaccgcttccctgaggagttctccattattgtcaccctgagagtcctc
gacgtccccgccaagaggaacgagtacatcttcacgctgatggccgaggagagccccagc
gtgctggtggggctccgctacgcgcccagcaagctccacttcctcttctggagccaggag
cgctccagcggctggcagacccgcgtcaccttccgcaacgtctccctggcggacagccgc
tggcacacactcgtcctggccatctctggccagtccttctcgctgacagtggactgcagc
agccccaaggatgtggtggtggagacgccgtttccagcttctctgtctgtgaagagagcc
agattttacctgggcaacaggaggagaaggaaaggcttgttcacgggtctgctgaggcag
cttgtcctgctgccaggagctgacgccacccctcggatatgcccggctgcgaattttgaa
gcagccacgctctccatccccgctgttctccaggacgtgccggtgaagtcagcgagcaac
gaggtgctgaagtacccgtacgagactgacatgaaggtgacccttgggtcccgtccaccc
tgcaccaagcaggagaaggcgcagttctggttcaacgccccccggagagggctgtacctc
tgtgacggcagcacctggatttccatgctggaagccaaacagcggctggactatgtggag
gagcaccagagcctggtgaccaactctgagacaatgggcatcgaggtcttcaccatcccg
aaggtgggactctttgcggccactgccaatcggtacaccccccctgggtcagccatctac
aagtggactgacgggaagttcgtgccctaccagaacatccccacctaccaagctcagtcc
tggaagtatttcaccatagggaaaaagatcttcctagcagtggctaattttgagcagaat
gacaggggtcaggagttctctgtaatatacaagtggagccacaggaaagagaaattcatc
acccaccagaggatcaccacgcacagcgctagggactgggaggcatttgtcattgaggga
gaggctttcctcgcagtggtcaaccacagagaagggaataaccacaacatagacagtgtg
atatacaggtggaacccccagactgggctctttgaaaccaaccagaccatccctacctct
ggtgcctacgactgggaatttttcaccattgggccatattccttcctggccgtggccaac
acatttaatggcacatccacgaagatctactctcacatctacatctggctccgtggctct
ttccagctcttccagtctattctgacctttggtgctgccgactgggaggtctttcatatc
ggggacagagtcttcctggctgtcgccaacagccacagctatgacagtgggatgccggtg
ccctctaatttctatgccatcaactcctccatctatgagctgaacgtcacggcccagatg
tttgtcaaattccaggatctcctcacctacagcgccctggactgggagttcttctcgatg
ggggacgactcctttctggtggtagcaaactccttcgacggcttcaccttctctgttaac
agtattatctacaggtggcaaggctatgaaggcttcgtagcagttcaccaccttcccacc
gttggctgtagagactgggaggcatttaacaccaccgagggctcctacctcatctactcc
agtgccaaggagccactttccaaggtgctgaagctgaaaaccacatga
DBGET
integrated database retrieval system
