Cygnus atratus (black swan): 118247343
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Entry
118247343 CDS
T09349
Symbol
ZEB1
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cata03000
]
118247343 (ZEB1)
Transcription factors [BR:
cata03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
118247343 (ZEB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_15
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2HE
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
118247343
NCBI-ProteinID:
XP_035401073
LinkDB
All DBs
Position
2:complement(15758719..15887825)
Genome browser
AA seq
1107 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYNNVVEANSDSDDEDKLHIVEEESVTDAADCDASVPED
DLPTDHTVLPENSEREGSTNSCWEDEAGKEKKEILGPEAQTDEVGCTVKEDECDSDAENE
QNHDPNVEEFLQQEDTAVIYPEAPEEDQRQGTPEASGQDENGTPDAFSQLLTCPYCDRGY
KRFTSLKEHIKYRHEKNEDNFSCSLCSYTFAYRTQLDRHMTSHKSGRDQRHVTQSSGNRK
FKCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCIGLMPVN
GRARSGLKTSQCSSPSLSASPGSPARPQIRQKIENKPLQEQLPVNQIKTEPVDYEFKPIV
VASGINCSTPLQNGVFSGGSPLQATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVA
VDGNVIRQVLENNHASLASKEQETISNASIQQAGHSLISAISLPLVDQDGTTKIIINYSL
EQPSQLQVVPQNLKKEHSVPANSCKNEKLPEDLTVKSEKDKNFEGETNDSTCLLCDDCPG
DLNALQELKHYETKNPPQLPQSSETEAEKSDSPVPSETGENNLSPGQPPLKNLLSLLKAY
YALNAQPSAEELSKIADSVNLPLDVVKKWFEKMQAGQISVQSSGPSSPEQAKVSSPTDND
DQTATTNVSEPQNSTSNSENPVNTTKSQTLSGGSTLNGSRSSTPSPSPLNLSSSRNSQGY
TYTAEGVQEEPQIEPLDLSLPKQHGELLERSTITSVYQNSVYSVQEEPLNLTCAKKEPQK
DNSITDSDPIVNVIPPSANPINIAIPTVTAQLPTIVAIADQNSVPCLRALAANKQTILIP
QVAYTYSTTVSPAVQETPPKQTQANGSQDERQDTSSEGVSNVEDQNDSDSTPPKKKMRKT
ENGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICKKAFKHKHHLIEHMRLHSGEKP
YQCDKCGKRFSHSGSYSQHMNHRYSYCKREAEERDSTEQEETGQEVLNIEHVGARASPSQ
IDSDERESLTREEEEDSEKEEEEEEEKEIEGLQEEKECRKLQEVEDEEEEGKTEGNKNDE
VVNQASNAETEVIQNNGQVSEEKTNKA
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcaggaagcaggcgaacccgcgccgcaacaacgtc
accaattataataatgtggtagaagcaaactcagattcagatgacgaagataaattgcat
atagtggaagaagaaagtgtaactgatgcagcagactgtgatgcgagtgtgccagaagat
gacttgccaacagaccatacagtattaccagaaaacagtgaaagagaagggagcacaaac
agttgctgggaagatgaagctggaaaagaaaaaaaggaaatcctggggcctgaagctcag
acagatgaagtaggatgtacagtaaaagaagatgaatgtgattctgatgcagaaaatgag
caaaaccatgaccctaacgttgaagaattccttcaacaagaagatacagctgttatctac
cctgaagcacctgaggaggaccagagacaaggcacaccagaagctagtggtcaggatgaa
aatggaacgcccgatgcattttcccaactgcttacctgcccatattgtgatagagggtac
aagcgttttacctctctgaaggaacacattaagtaccgccatgaaaagaacgaagataac
ttcagttgctccttgtgcagttacacgttcgcgtacaggactcagctggaccgccacatg
acatcgcacaagtcgggacgagatcagagacatgtgacgcaatccagcggtaatcgaaaa
ttcaagtgcactgaatgtggaaaagcttttaaatataaacatcatctaaaggagcaccta
cgaatccacagtggagagaagccatatgagtgcccaaactgcaagaaacgtttttcccat
tcgggttcatacagctcacacataagcagtaagaagtgcattggtttgatgccagtgaat
ggtcgagctcggtcagggctcaagacgtctcagtgctcctccccttccctttctgcatca
cccggtagcccagcaagaccacagatacgacaaaagatagaaaataaacccttgcaagag
caacttcctgttaaccaaattaaaactgaacctgtggattatgaattcaagcccatagtg
gttgcttcaggaattaattgttcaacccctttgcagaatggggtttttagtggtggtagc
ccattgcaggcaaccagttctcctcagggtgtggtgcaagctgttgttctaccaacagta
ggtctggtgtctcccataagcatcaacttaagtgacattcaaaatgtacttaaagtggca
gtggatggtaatgtaataaggcaagtattggaaaacaatcatgctagtcttgcatccaaa
gaacaagaaacaatcagcaatgcatctatacaacaagctggccattccctcatttcagct
atcagtcttcctttggttgaccaagatgggacaaccaaaattatcattaactacagcttg
gagcagccaagtcaacttcaggttgttccacaaaatctaaaaaaagaacactctgttcct
gcaaacagttgcaaaaatgaaaaattaccagaagatcttacggtgaagtctgagaaagat
aagaactttgaaggagagaccaatgatagcacttgtcttctttgtgatgactgtccagga
gatcttaatgcacttcaagaattaaagcactatgaaacgaaaaatcctcctcagcttcct
cagtccagtgaaacagaagctgagaagtctgactcccctgtcccatcagaaactggggag
aacaacttgtctcctggtcagccacctttaaagaaccttttatcgctcctaaaagcatat
tatgcattaaatgcacaaccaagcgcagaagagctttcaaaaatagccgattcagtaaac
ctaccactggatgtggtaaaaaagtggtttgaaaaaatgcaagctggacaaatttctgtg
cagtcttctggaccatcttctcccgaacaagctaaagtaagcagtcccacagataacgat
gatcaaacagcaactacaaatgtgagtgaaccccagaacagcacaagtaattcagaaaat
ccagtcaatacaacaaaatctcagactttatcagggggatcaactctgaatggttcacgc
agtagcacgccatccccatcgccactaaacctttcttcatcacgaaattcacagggttat
acgtacacggcagagggtgtacaagaagagccacaaattgaacctcttgacctttcgcta
ccaaagcaacatggagaactgttggaaagatctaccataactagtgtttaccagaacagt
gtttattctgtccaagaagaacctttgaacttaacttgtgcaaaaaaagaaccacaaaag
gacaacagtattacagactctgatcctattgtaaatgtaatcccaccaagtgccaatccc
ataaatattgctatacctacagtcactgcccagttacctacaattgttgccattgctgac
cagaacagtgttccatgcttgagagctctcgctgccaataagcaaaccattttgattccc
caggtggcttatacgtactctactacagttagtcctgcagttcaggaaacaccaccaaaa
cagacccaagccaatggaagtcaggatgaaaggcaagacactagctcagaaggagtatcg
aatgtagaagatcaaaatgattctgattcaacacccccaaagaaaaagatgagaaagaca
gaaaatgggatgtatgcatgtgatttatgtgacaaaatattccagaagagcagttcatta
ttgagacataagtatgaacacacaggtaaaagacctcatgagtgtggaatctgtaaaaaa
gcattcaaacacaaacaccatttgattgaacacatgcgactgcattctggggaaaaaccc
taccaatgtgacaaatgtggaaagcgtttttcacactcggggtcttactctcaacacatg
aatcatcgctactcctattgcaaacgagaggcagaagagcgtgatagcacagagcaggaa
gagacgggacaggaggtcctaaatattgagcatgttggtgccagggcatctccgtcgcag
atcgactcggatgagagagagagtctaaccagggaagaagaggaagacagtgaaaaagag
gaagaggaggaggaagaaaaagagatagaaggacttcaggaagaaaaagaatgtagaaaa
ctacaagaagtagaggatgaagaagaagaagggaaaactgaaggtaacaagaatgatgaa
gttgtaaatcaagcaagcaatgcagaaacagaagttatacagaataatgggcaggtgtca
gaagaaaaaacaaataaagcttaa
DBGET
integrated database retrieval system
