Cygnus atratus (black swan): 118247363
Help
Entry
118247363 CDS
T09349
Symbol
ITGA8
Name
(RefSeq) integrin alpha-8 isoform X1
KO
K06584
integrin alpha 8
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04510
Focal adhesion
cata04512
ECM-receptor interaction
cata04514
Cell adhesion molecules
cata04810
Regulation of actin cytoskeleton
cata04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118247363 (ITGA8)
04514 Cell adhesion molecules
118247363 (ITGA8)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118247363 (ITGA8)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118247363 (ITGA8)
04810 Regulation of actin cytoskeleton
118247363 (ITGA8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cata04515
]
118247363 (ITGA8)
Cell adhesion molecules [BR:
cata04515
]
Integrins
Integrin alpha subunits
118247363 (ITGA8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
118247363
NCBI-ProteinID:
XP_035401134
LinkDB
All DBs
Position
2:22303729..22415391
Genome browser
AA seq
1049 aa
AA seq
DB search
MLRRRQPPCPLLLILLLLLLVLSALAVAFNLDEEKLTVYSGPPGSYFGYSVDFYIPDPGR
VGVLVGAPKANTSQPDIVQGGAVYHCAWPAARCQQIPFDNTNNRKIKVNGTREPIEFKTN
QWFGATVKAHKEKVVACAPLYHWRTLKDSPEKDPVGTCYVAIQNFSAYAEYSPCRNSNAD
PEGQGFCQAGFSLDFYKNGDLIVGGPGSFYWQGQVITASIADIIANYSFKDILRKLAREK
QTGVAPPTYDDNYMGYSVAAGEFTGDSEQELVAGVPRGAQNFGYVSIINSSDLTFIQNFT
GEQMASYFGYTVAVSDVNNDGLDDILVGAPLFMEREFESKPKEVGQVYLYMQESAFLFQD
AQILTSTEVFGRFGSAITHLGDLNQDGYNDIAIGAPFAGEDRRGKVFIYNGYSNGLNTNP
SQVLNGAWASQSMPSGFGFTLRGDSDVDKNDYPDLIVGAFGAGKAVVYRARPVVTVNALL
ILNPMIVNPDNKTCQLPGSQLLVACFTVKVCAAFEGQSISDEIVLKGELQLDSLKQKGAV
KRTLFFDYHQSHHYFSIVIERQKQLRCQDFLVYLRDETEFRDKLSPININFNYSLDESCY
EDGLTVKPILNYYQKSSLTEQAYILVDCGEDNLCIPDLQLSAMPDKDPLIIGEENCVMLI
INPRNDGEGAYEAELHIKIPPEADYTGVERNNKALRVLSCDYKMENETRMVVCDLGNPMV
AGANFSTGIRFSVQHFENSDFSINFELQIKSSNKINPTSNLVNLRINISAVAQVQVRGVS
HPPQIVLPLHNWEPKDEPTKEEELGPLVEHIYELHNIGPSAINNTVLHVGWPVSSREEFL
LYILHIQTHGPLHCQTSSPINILQIKFAIPQDTPELAAFLYNSTISHYIRRREVTVAEPY
RRNSAKILNCTNVKCILISCNVGQLERGKSAALKIRSRLWAQTFLQRKNDPYTLSSNVSF
EVKNMPYKVQPAKLPRGSIAIRTSVIWSTPNVSFVIPLWVIILAILLGLLVLAMLTLALW
KCGFFDRARPPQDDMADREQLTNNKTTDA
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccgccggcagccgccgtgcccgctcctcctcatcctcctcctcctcctcctc
gtcctgtcagcgctggcggtggccttcaacctggacgaggagaagctgacggtgtacagc
gggccccccggcagctacttcggctactcggtggacttctacatccccgaccccggcagg
gtcggcgtcctggtgggagcccccaaggccaacacgtcgcagccggacatcgtgcaggga
ggagcggtgtaccactgcgcctggcccgccgcacgctgccagcagatacccttcgacaac
acgaacaacaggaaaattaaggtcaatggcaccagggaaccaattgagtttaagacaaat
cagtggtttggggcaacggtcaaagctcataaagaaaaagttgtggcttgtgctccctta
tatcattggaggacccttaaagatagccctgagaaggacccggttggcacctgctatgta
gcaattcagaacttcagtgcctatgctgaatattcaccctgtcgcaacagcaatgcagat
cctgaaggacaaggcttttgtcaagcaggtttcagcttagatttttacaagaatggagac
ctgatagtaggcgggcctggtagtttttattggcaaggtcaggtaatcactgcaagcatt
gcggatatcattgcaaattattccttcaaagatattctgaggaaactggcacgagagaag
caaacaggagtggcaccgcccacgtatgatgacaattacatgggatactcagtggctgct
ggggaatttactggagattctgaacaagagttggttgctggagtcccgagaggagcacag
aactttggctatgtctcaatcattaattcttctgacttgaccttcatccagaacttcact
ggtgaacagatggcgtcttattttgggtacactgttgcagtatctgatgttaacaatgat
ggtttagatgatatcttagttggggcccctctctttatggaacgagaatttgagagcaag
cctaaagaagttgggcaagtttatctgtacatgcaagaaagtgctttcctcttccaagac
gcgcaaattctgaccagcacagaagtgttcggtagatttggcagtgcaatcacacacctt
ggagatctcaatcaggatggatataacgacattgctattggtgcaccatttgcaggtgaa
gaccgaagagggaaagtgttcatttacaatggatatagtaatgggttaaatactaaccct
tcccaggttctcaatggagcctgggcctcacagtccatgccttcgggatttggcttcact
ctgagaggagactcggatgtagacaagaatgattacccagatttaattgtgggtgcattt
ggagctggaaaagcagttgtttacagagccagacctgttgtgaccgtgaatgctctgctc
attctgaaccctatgattgtcaatccagacaataagacttgtcagctccctggctctcag
cttttggtagcctgttttacagtaaaagtctgcgcagcatttgaaggtcaaagtatttca
gatgagatagtgctgaaaggtgaattgcagttagattcattgaaacagaaaggagctgtt
aaaaggactctcttctttgactaccatcagtcacatcattacttctccattgtgatagaa
agacagaaacagctccgttgccaggactttcttgtttatctcagagatgaaacagaattt
agagataaattgtctcccatcaatataaactttaattatagcttggatgaatcctgttat
gaagatggcttgactgtgaagccaatactgaattattaccagaaaagctcattaacagaa
caggcttacattctggtagactgtggggaggacaacttgtgcattcctgacttgcagctt
tctgctatgccagataaagatccgctaataattggagaagaaaactgtgtaatgctcata
ataaatccaaggaatgatggagaaggagcctatgaagctgagctacatataaagattcca
cctgaagcagattacactggtgttgaacgcaacaacaaggcactgcgtgtattgagctgt
gattacaagatggaaaatgaaactagaatggtggtttgtgatcttgggaaccccatggtg
gctggcgcaaatttctctacaggcatccgattttctgttcagcattttgaaaattcagat
ttcagcatcaattttgagctgcaaataaaaagttctaataagatcaatccaaccagcaat
ttagttaacctccgtatcaacatcagtgctgtggctcaagtacaggtcagaggagtgtct
caccccccacaaattgttttgccgcttcacaactgggaacccaaagatgaacctactaaa
gaagaagaactcggtcctttagtagaacacatctatgagcttcacaatataggtcccagt
gccatcaacaacacagttctccatgtcggttggcctgtgtccagtcgtgaagaatttctt
ctttacattctccatattcagacacatggaccactgcactgtcagacaagctctcctatt
aatatactgcaaataaagtttgctattccacaagacactcctgaacttgctgcttttttg
tataattccacaatttctcattatatcaggagaagggaggtcacagttgcagaaccttac
aggagaaactctgcaaaaatattgaactgtacaaatgtgaagtgtatcttaatttcctgc
aatgtgggacaactggaaagagggaagagcgcagcactaaaaatcaggtcccggctatgg
gcccaaactttcctgcagagaaaaaacgatccctatactctttcttccaacgtgtccttc
gaagttaagaacatgccctataaagtgcagccagcaaagctcccccggggaagcatagca
atcagaacatctgtcatttggtccactccaaatgtctcctttgtaatccctttatgggtt
ataatactagcgattcttcttggactactggtactagctatgttgaccctagctttatgg
aagtgtggcttctttgacagagctagaccccctcaagatgacatggctgacagggaacaa
ctgacaaataacaagactactgatgcataa
DBGET
integrated database retrieval system