Cygnus atratus (black swan): 118247365
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Entry
118247365 CDS
T09349
Symbol
VPS50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cata04131
]
118247365 (VPS50)
Membrane trafficking [BR:
cata04131
]
Protein recycling
Others
EARP complex
118247365 (VPS50)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
118247365
NCBI-ProteinID:
XP_035401140
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All DBs
Position
2:25197695..25278765
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AA seq
967 aa
AA seq
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MQKIKSLMARQGLRSPQESVHDLSPIENLRIPSKEELRESREEPTDPQAQQEIINSIEEV
YFSNDSFDIVKYELERLPPVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVEELE
RVTSLQTGLQLAAVICANGRRHLNIAKEGFTQTSLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDISHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMQWHENHDQDETATVSSV
SDGSNVIGTEENSFDRSYIKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLD
VISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSS
FSILQLHEFKFMEQSRSPSVSPSKQPASAISTAVTLFEQYCNGGNPFEIQADSKDDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPMKSVSRETLRSRKRSDY
NLNKVNAPILTNTTLNVVRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DTFESTGLGLSSSRLRTTLNRIQESLIDLEVSGDPTGTLTAAEERKEKVPSPHLSHLVVL
TSGNSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAKKPFLQQFYSQTVSTASELR
KPVYWIVAAKAIDYEQMLLLMTNVKWDVKEIMSQHNVYVDALLKEFEEFNRRLNEVSKRV
RIPLPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPI
PDKEFVETYIKAYYLTENDMERWIKEHREYSTKHLTNLVNVCLGSHINKKARQKLLAAID
DIDRPKR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgctgatggcccggcagggtctaagaagtcctcaggagagtgtc
catgacctcagtcctattgaaaacttacggattcctagtaaggaggagctcagagaatca
cgggaagaaccaactgatcctcaagctcagcaagaaataattaatagtattgaagaagtt
tatttttccaatgattcctttgatattgtgaagtatgaattagagaggcttcctccagta
cttagtcttcaagaactggaagagtacagagataaattaaaacaacaacaagctgctgta
tctaagaaagttgcagacttgattcttgaaaaacagcctgcatatgttgaggaacttgaa
cgtgttacatcattacagactggtcttcaattagcggctgttatttgtgcaaacggaaga
agacacctgaatattgcaaaggagggattcacacaaactagtttgggacttcttgcaaat
caaaggaaacgacagttgcttattggactgctaaagtctctgagaacaataaaaacactg
caaagaactgatgtacgcttaagtgagatgctagaggaagaggactatccaggagctatt
cagctgtgcttggaatgccagaaagctgccagcactttcaaacactacagttgtataagc
gagttaaattcaaaactgcaagatactttggaacaaatagaggaacaattggatgtagcg
ctctccaagatatgcaagaacttcgatataagtcattacacaaaggttcagcaagcttac
aggctgcttggaaaaacacagacagcaatggaccaattacatatgcacttcactcaagcc
attcacaacactgtgtttcaagtagttcttggatatgtggagctgtgtgcaggaaacaca
gacaccaagtttcagaagttacagtacaaagacctctgtacacatattacatcagacagc
tacattccatgccttgctgatctctgtaaagccctttgggaagttatgctcagctattac
cgaacaatgcagtggcatgagaatcatgatcaagatgagacagcaactgtatcttccgtt
tcagatggcagcaatgtgattggaactgaggagaacagttttgaccgcagctacataaaa
aagaaattggaacatgggctttcacgaatatggcaggatgttcaactgaaagtgaaaacc
tatcttctgggaacggatctgtctaacttcaaatatgacgacttcatatttgtacttgat
gttatcagcaggctgatgcaagttggagaagaattttgtggcagtaagtctgaagttttg
caagaatctatcagaaaacaaagtgttaactatttcaaaacataccacagaacccgtctt
gaagaattaagaatgtttttggagaatgagacctgggaactttgccctgttaaatccagc
tttagtattttgcagcttcatgaatttaagttcatggagcagtcacgttccccatctgtg
tcacctagtaagcagcctgcttcagcaatttcaacagcagtaactttatttgagcagtac
tgtaatggaggaaacccatttgaaatccaggctgacagcaaagatgatgagacagaagat
gtgttagcttccaatgggtatgaatcggatgaacaagaaaaaagtgcgtatcaggagtat
gatagtgacagtgatgttcctgaagagttgaaaagagactatgtagatgagcagacagga
gatgcccctatgaaaagtgtttctcgagaaactctgaggagcagaaagagatcggattat
aacctcaataaagtgaatgcacctatcctaacaaacactacactgaatgtagtaaggctt
gttggtaaatatatgcagatgatgaatattctcaaaccaattgcgtttgatgtgatccac
ttcatgtcccagctcttcgactactatctgtatgcagtttatacgttttttggccgaaat
gacacgtttgaatcaacaggattgggcctcagtagcagcagattacgcacgacgctgaat
agaatccaggagagcctcattgatctggaggtctctggtgatcccacaggaactctcaca
gctgctgaagagagaaaggagaaggtgccaagcccacatctcagtcatctagtagttctg
acatctggcaactcactgtatggtttggcagagagagtggtagccacggaatccttggta
tttctggctgagcagtttgagtttcttcaacctcatcttgatgcggtgatgccagctgcc
aagaagccttttcttcagcagttctattctcagacagtgtcaactgccagtgaactacgc
aaaccggtttattggattgttgctgctaaagccattgattatgaacagatgctgcttctc
atgactaatgtaaaatgggatgtgaaggaaatcatgtcacaacacaatgtatacgtagat
gctcttttaaaggaatttgaagaatttaacagaaggctgaatgaagtatctaagagagtt
cgtattccactgccggtctcaaatatcctttgggagcactgcattcgcttagctaataga
actcttgtggaaggttatgctaatgtaaagaaatgcagcaatgaaggacgtgccttgatg
caactggactttcaacagttcttaatgaaactagaaaagttaacagacattaggcccatt
ccagataaagaatttgtggagacctacattaaagcatactacttaacagaaaatgacatg
gagcgctggataaaagagcacagggaatattccactaagcacttgacaaatctggtgaat
gtttgtctgggatcccacatcaacaagaaggcaagacagaagctgctggctgctattgat
gacatagacaggcctaaaagataa
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