KEGG   Cygnus atratus (black swan): 118247365
Entry
118247365         CDS       T09349                                 
Symbol
VPS50
Name
(RefSeq) syndetin
  KO
K23288  syndetin
Organism
cata  Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:cata00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cata04131]
    118247365 (VPS50)
Membrane trafficking [BR:cata04131]
 Protein recycling
  Others
   EARP complex
    118247365 (VPS50)
SSDB
Motif
Pfam: Vps54_N Syndetin_C
Other DBs
NCBI-GeneID: 118247365
NCBI-ProteinID: XP_035401140
LinkDB
Position
2:25197695..25278765
AA seq 967 aa
MQKIKSLMARQGLRSPQESVHDLSPIENLRIPSKEELRESREEPTDPQAQQEIINSIEEV
YFSNDSFDIVKYELERLPPVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVEELE
RVTSLQTGLQLAAVICANGRRHLNIAKEGFTQTSLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDISHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMQWHENHDQDETATVSSV
SDGSNVIGTEENSFDRSYIKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLD
VISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSS
FSILQLHEFKFMEQSRSPSVSPSKQPASAISTAVTLFEQYCNGGNPFEIQADSKDDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPMKSVSRETLRSRKRSDY
NLNKVNAPILTNTTLNVVRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DTFESTGLGLSSSRLRTTLNRIQESLIDLEVSGDPTGTLTAAEERKEKVPSPHLSHLVVL
TSGNSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAKKPFLQQFYSQTVSTASELR
KPVYWIVAAKAIDYEQMLLLMTNVKWDVKEIMSQHNVYVDALLKEFEEFNRRLNEVSKRV
RIPLPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPI
PDKEFVETYIKAYYLTENDMERWIKEHREYSTKHLTNLVNVCLGSHINKKARQKLLAAID
DIDRPKR
NT seq 2904 nt   +upstreamnt  +downstreamnt
atgcagaagatcaagtcgctgatggcccggcagggtctaagaagtcctcaggagagtgtc
catgacctcagtcctattgaaaacttacggattcctagtaaggaggagctcagagaatca
cgggaagaaccaactgatcctcaagctcagcaagaaataattaatagtattgaagaagtt
tatttttccaatgattcctttgatattgtgaagtatgaattagagaggcttcctccagta
cttagtcttcaagaactggaagagtacagagataaattaaaacaacaacaagctgctgta
tctaagaaagttgcagacttgattcttgaaaaacagcctgcatatgttgaggaacttgaa
cgtgttacatcattacagactggtcttcaattagcggctgttatttgtgcaaacggaaga
agacacctgaatattgcaaaggagggattcacacaaactagtttgggacttcttgcaaat
caaaggaaacgacagttgcttattggactgctaaagtctctgagaacaataaaaacactg
caaagaactgatgtacgcttaagtgagatgctagaggaagaggactatccaggagctatt
cagctgtgcttggaatgccagaaagctgccagcactttcaaacactacagttgtataagc
gagttaaattcaaaactgcaagatactttggaacaaatagaggaacaattggatgtagcg
ctctccaagatatgcaagaacttcgatataagtcattacacaaaggttcagcaagcttac
aggctgcttggaaaaacacagacagcaatggaccaattacatatgcacttcactcaagcc
attcacaacactgtgtttcaagtagttcttggatatgtggagctgtgtgcaggaaacaca
gacaccaagtttcagaagttacagtacaaagacctctgtacacatattacatcagacagc
tacattccatgccttgctgatctctgtaaagccctttgggaagttatgctcagctattac
cgaacaatgcagtggcatgagaatcatgatcaagatgagacagcaactgtatcttccgtt
tcagatggcagcaatgtgattggaactgaggagaacagttttgaccgcagctacataaaa
aagaaattggaacatgggctttcacgaatatggcaggatgttcaactgaaagtgaaaacc
tatcttctgggaacggatctgtctaacttcaaatatgacgacttcatatttgtacttgat
gttatcagcaggctgatgcaagttggagaagaattttgtggcagtaagtctgaagttttg
caagaatctatcagaaaacaaagtgttaactatttcaaaacataccacagaacccgtctt
gaagaattaagaatgtttttggagaatgagacctgggaactttgccctgttaaatccagc
tttagtattttgcagcttcatgaatttaagttcatggagcagtcacgttccccatctgtg
tcacctagtaagcagcctgcttcagcaatttcaacagcagtaactttatttgagcagtac
tgtaatggaggaaacccatttgaaatccaggctgacagcaaagatgatgagacagaagat
gtgttagcttccaatgggtatgaatcggatgaacaagaaaaaagtgcgtatcaggagtat
gatagtgacagtgatgttcctgaagagttgaaaagagactatgtagatgagcagacagga
gatgcccctatgaaaagtgtttctcgagaaactctgaggagcagaaagagatcggattat
aacctcaataaagtgaatgcacctatcctaacaaacactacactgaatgtagtaaggctt
gttggtaaatatatgcagatgatgaatattctcaaaccaattgcgtttgatgtgatccac
ttcatgtcccagctcttcgactactatctgtatgcagtttatacgttttttggccgaaat
gacacgtttgaatcaacaggattgggcctcagtagcagcagattacgcacgacgctgaat
agaatccaggagagcctcattgatctggaggtctctggtgatcccacaggaactctcaca
gctgctgaagagagaaaggagaaggtgccaagcccacatctcagtcatctagtagttctg
acatctggcaactcactgtatggtttggcagagagagtggtagccacggaatccttggta
tttctggctgagcagtttgagtttcttcaacctcatcttgatgcggtgatgccagctgcc
aagaagccttttcttcagcagttctattctcagacagtgtcaactgccagtgaactacgc
aaaccggtttattggattgttgctgctaaagccattgattatgaacagatgctgcttctc
atgactaatgtaaaatgggatgtgaaggaaatcatgtcacaacacaatgtatacgtagat
gctcttttaaaggaatttgaagaatttaacagaaggctgaatgaagtatctaagagagtt
cgtattccactgccggtctcaaatatcctttgggagcactgcattcgcttagctaataga
actcttgtggaaggttatgctaatgtaaagaaatgcagcaatgaaggacgtgccttgatg
caactggactttcaacagttcttaatgaaactagaaaagttaacagacattaggcccatt
ccagataaagaatttgtggagacctacattaaagcatactacttaacagaaaatgacatg
gagcgctggataaaagagcacagggaatattccactaagcacttgacaaatctggtgaat
gtttgtctgggatcccacatcaacaagaaggcaagacagaagctgctggctgctattgat
gacatagacaggcctaaaagataa

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