Cygnus atratus (black swan): 118247478
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Entry
118247478 CDS
T09349
Name
(RefSeq) ATP-dependent translocase ABCB1-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118247478
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cata02000
]
118247478
04147 Exosome [BR:
cata04147
]
118247478
04090 CD molecules [BR:
cata04090
]
118247478
Enzymes [BR:
cata01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
118247478
Transporters [BR:
cata02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
118247478
Exosome [BR:
cata04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118247478
CD molecules [BR:
cata04090
]
Proteins
118247478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
Rad17
RsgA_GTPase
Zeta_toxin
AAA_5
AAA_28
AAA_30
AAA_15
G-alpha
AAA_29
AAA_14
AAA_19
DUF87
DUF815
nSTAND1
DUF2098
Motif
Other DBs
NCBI-GeneID:
118247478
NCBI-ProteinID:
XP_050564999
LinkDB
All DBs
Position
2:complement(22716544..22752235)
Genome browser
AA seq
1290 aa
AA seq
DB search
MHSEDEKKQKSTEDGNSHENTTSSQGQEQEDKQKGKKKKEEKPKMVSPFTLFRYSSCTDK
LLMIFGTLLAIAHGSSLPIVMIIFGDMTDGFVNAANTNLTGKNMGHYSSAEILGGLEENM
TRYAYYYSAIAAGVLVAAYIQTSFWTLAAGRQIKKIREKFFHAIMRQEIGWFDVNDVGEL
NTRLTDDVSKINEGIGDKIGLLVQSLTTFVAGFIVGLIRGWKLTLVILAVSPVLGLSAAL
WAKVLSAFTDKEQAAYAKAGAVAEEVLGAIRTVIAFGGQEKEIKRYHKNLEDAKRIGIKK
AITANISMGAAFLLIYASYALAFWYGTTLVLSDDYTIGKVLTVFFSVLIGAFSIGQTAPS
IEAFANARGAAYAVFSIIDNEPQIDSYSETGYKPDHIKGNLEFQNVHFSYPSRPDVQILK
GLNLKVNCGQTVALVGGSGCGKSTTVQLIQRFYDPKEGMITIDGQDIKTLNVRYLREIIG
VVNQEPVLFATTIAENIRYGREDVTMEEIEKATKEANAYDFIMKLPKKFETVVGERGAQL
SGGQKQRIAIARALVRNPKILLLDEATSALDTESESVVQAALDKAREGRTTIVVAHRLST
VRNADLIAVFESGIITEEGNHFKLIERKGIYYKLVNMQTIEAEDPSLEKGENAGSVKKSE
SELEQEESLMKGLRRRSTRRSMKKPGEKNDDADVKNNSPDEELPPASFLKIMRLNKTEWP
YFVAGTICAIINGALQPAFSVIFSEIIGIFSETNEKVLREKSNLYSLLFLALGIISFFTF
FFQGFTFGKAGEILTMRLRFIAFKAMLRQDMAWFDDSKNSTGALTTRLANDASQVKGATG
VRLALIAQNIANLGTGIIISLIYGWQLTLLLLAVVPVIAVAGMIEMKMLAGHAKKDKVEL
EAAGKIATEAIENIRTVVSLTRERKFEYMYGEHLHVPYRNSVKKAHIFGFCFALSQAMMF
FTYAGCFRFGAYLVANGHMEYKSVFLVFSAVVFGAMALGQSSSFAPDYAKAKIAAAHLFV
LFERVPLIDSYSEEGEKPETFGGNTRIKDVTFNYPNRPEVKVLQGLNLKVEKGQTLALVG
SSGCGKSTVVQLLERFYDPLGGEIVFDDKNAKTVNIQWLRSHIGIVSQEPILFDCTIAEN
IAYGDNSREVSHEEIVRAAKEANIHSFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARAL
IRNPQILLLDEATSALDTESEKIVQEALDKAREGRTCIVIAHRLSTIQNADKIAVIQNGK
VIEQGTHQQLLAEKGVYYSLVNVQSGSCNM
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgcattctgaagatgaaaagaagcagaagagtactgaagatggaaatagtcatgagaac
actacatccagccagggtcaagaacaagaagacaaacagaagggaaagaagaagaaagag
gaaaaacctaaaatggtcagcccatttacactgtttcgatactccagttgcacagataaa
ttactaatgatatttggcactctactggcaatagcccatggaagcagtcttcctattgtg
atgataatttttggtgatatgactgatggctttgttaatgctgcaaacacaaatcttaca
ggtaagaatatgggacattattcctctgcagaaattcttggcggtctggaagaaaatatg
acaagatatgcatattactattctgcaattgcagctggtgttcttgttgctgcttatatc
caaacttcattttggaccctagcagcaggccgacaaataaaaaaaattagagaaaaattt
tttcatgcaattatgagacaggaaattggatggtttgatgtaaatgatgtgggagaactt
aacacgcgtctcactgatgatgtctccaagattaacgaaggaataggtgataaaattgga
ttgcttgtccaatcgttaacaacatttgtggcaggatttattgttggcctcataagagga
tggaaattaacccttgtaatacttgcagttagtcctgtcctaggactttcagcagccctc
tgggcaaaggttctctctgcattcactgacaaagagcaagctgcatatgcaaaagcagga
gctgttgcagaggaagttcttggcgcaatccgtactgtaatagcttttggagggcaagaa
aaagaaatcaaaaggtatcataaaaatttagaagatgctaaacgcattggaataaaaaag
gctattacagctaatatttctatgggtgctgctttcttactgatatatgcatcatatgca
ctggccttctggtatggaactaccttggtcttaagtgatgattacaccattggcaaagtt
ctcactgtctttttctctgtattgattggagctttcagtattggacagactgccccaagc
atagaggcatttgctaatgcaagaggagcagcctatgcagtctttagtatcatagacaat
gaacctcaaattgatagttattcagagacaggctacaaaccagaccacattaaagggaac
ttggagttccaaaatgttcacttcagttacccatccagaccagatgttcagatactgaaa
ggcttgaatctgaaggtcaactgtggccagacagtagccctggttggtggcagtggctgt
gggaaaagtacaactgttcagctcatccagagattttacgatcccaaggaaggcatgatt
accattgatgggcaggatattaagaccctaaatgtaagatatctgcgggagattattggt
gtggtgaatcaggagcccgtgctgtttgctactaccattgcagaaaatattcgctacggc
cgagaggatgtcaccatggaagaaattgagaaagctaccaaggaagctaacgcttatgat
ttcatcatgaagctacccaagaagtttgaaaccgtggttggagaaagaggggcacagctg
agcggaggccagaagcaaagaatagcaattgcccgagctctggttcgcaatcccaaaatt
ctgctgcttgatgaggcaacgtcagctttggatactgagagtgaatcagttgtgcaggca
gcacttgacaaggcaagggaaggacgcaccacgattgtagtagctcatcgcctgtcaaca
gtccgaaatgcagatcttatagctgtgtttgaaagtggaattatcacagaagaagggaat
cattttaaactgattgaaagaaagggaatctactacaaacttgttaacatgcagacaata
gaagctgaagatccatcattggaaaaaggtgagaatgcaggcagtgttaaaaaaagtgag
tctgaactggaacaggaagaatccttaatgaaaggtctgagaagacgatcaactcgcaga
agcatgaaaaaaccaggagaaaagaatgatgatgctgatgtgaaaaataattcacctgat
gaagaattacctccagcttcatttctgaaaattatgaggttgaacaaaactgagtggcca
tactttgtagctggaactatctgtgcaattatcaatggagctttacaacccgcgttttca
gtcatattttcagaaattatagggattttttcagaaactaatgagaaggttttgagagaa
aagagcaacttatattcactgctgtttttagcacttgggatcatttccttttttactttc
ttttttcagggtttcacatttggcaaagctggagaaattcttacaatgaggcttcgattc
attgcatttaaagcaatgcttagacaggacatggcctggtttgatgattctaaaaacagc
actggagcgttaactacaagacttgctaatgatgcctcacaagtgaaaggagcaactggt
gtcagattagcattaattgcccaaaacatagctaacctgggaactggaattattatatca
ttaatttatggctggcagctgaccctgttacttttagcggtggtgccagtcatcgcagtg
gcaggaatgatcgaaatgaagatgttggctgggcatgctaaaaaagataaagtagagctg
gaagctgcaggaaagattgccacagaagccatagaaaatattcgaactgttgttagtttg
accagagaaagaaaatttgaatatatgtatggagaacatttgcatgtaccatacagaaat
tctgtgaagaaggcgcatatatttggattttgttttgccctttcccaagcaatgatgttt
tttacctatgctggctgtttccggtttggtgcctatctagtggcaaatggacacatggag
tataaaagtgtgtttttagtgttttcagctgttgtatttggtgcaatggcactaggacaa
agcagctcttttgcgccagactatgccaaagccaagatagcagcagcccacttgtttgtg
ctatttgaaagagtacccttaatagacagttacagtgaggaaggagagaagcctgaaaca
tttgggggaaatacaaggatcaaagatgtgacatttaactacccaaaccgaccagaggtc
aaagtactccaaggtttgaatctaaaagtagaaaaaggacaaacacttgctcttgttggt
agcagtggatgtggaaagagcactgttgttcagctgcttgagagattttatgatccactc
ggtggagaaattgtgtttgatgacaaaaatgcaaagacagtaaatatccagtggcttaga
tctcacattggtatagtctcccaagagccaatcctgtttgactgcactattgctgaaaac
atcgcatatggagataacagccgggaagtgtcacatgaggaaattgttagggcagcaaaa
gaagccaatattcattccttcattgactctctgccagataaatacaatacccgcgtagga
gacaagggaactcagctttctggtggtcagaaacaacgcattgctattgcccgagctctt
atacgtaacccccaaattctgctactggatgaagctacatctgccttggacacagaaagt
gaaaagattgtccaggaagcgctggataaagccagggaaggtcgcacctgcatcgtgata
gctcaccgcctgtccaccatccagaacgctgacaagattgccgtgatccagaatggcaag
gtcatagagcaagggactcatcagcagctcctggctgaaaaaggcgtctactactctctg
gtcaatgttcaaagtgggtcatgcaacatgtaa
DBGET
integrated database retrieval system
