Cygnus atratus (black swan): 118247539
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Entry
118247539 CDS
T09349
Symbol
APP
Name
(RefSeq) amyloid-beta precursor protein
KO
K04520
amyloid beta A4 protein
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cata01002
]
118247539 (APP)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cata00535
]
118247539 (APP)
00536 Glycosaminoglycan binding proteins [BR:
cata00536
]
118247539 (APP)
Peptidases and inhibitors [BR:
cata01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
118247539 (APP)
Proteoglycans [BR:
cata00535
]
Cell surface proteoglycans
Others
118247539 (APP)
Glycosaminoglycan binding proteins [BR:
cata00536
]
Heparan sulfate / Heparin
Others
118247539 (APP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
Insulin_TMD
Prominin
Motif
Other DBs
NCBI-GeneID:
118247539
NCBI-ProteinID:
XP_035401483
LinkDB
All DBs
Position
1:complement(108386080..108596462)
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AA seq
753 aa
AA seq
DB search
MLPHVALLLLASAAAARAVEVPADGNAGLLAEPQIAMFCGKLNMHMNVQNGKWESDPSGT
KTCISTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRGWKQCNGHPHIVVPYRCLV
GEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKESCSEKSMNLHDYGMLLPCGIDKF
RGVEFVCCPLAEESDNLDSADAEDDDSDVWWGGADADYADGSDDKVVEEQPEEDEELTVV
EDEDADDDDDDGDGDEIEETEEEYEEATERTTSIATTTTTTTESVEEVVREVCSEQAETG
PCRAMISRWYFDVAEGKCAPFFYGGCGGNRNNFDSEEYCMAVCGSVLPTTAASTPDAVDK
YLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQE
KVESLEQEAANERQQLVETHMARVEAMLNDRRRIALENYITALQTVPPRPRHVFNMLKKY
VRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSFLYNVPAVAEE
IQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVDGEFSLDD
LQPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTNVKTEEISEVKMDAEFRH
DSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVE
VDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgctgccccacgtcgccctcctgctgctggcctccgccgccgccgctcgggccgtagag
gtgcctgctgatggaaatgctggattgttggcagagcctcaaatcgccatgttctgtggc
aaactcaatatgcacatgaatgttcagaatggaaaatgggaatctgacccctccgggacc
aagacctgcatcagcactaaagaaggaattctgcagtattgccaggaagtttaccctgaa
ttgcaaattaccaatgttgtcgaagccaaccagccagtgacaatccaaaactggtgcaag
agaggatggaagcagtgcaatggtcacccacatattgtggttccgtacaggtgtttggtg
ggcgagtttgtgagtgatgcccttctggtaccagataagtgcaagttccttcaccaggaa
aggatggatgtgtgtgaaactcacctgcactggcatactgttgctaaagagtcctgtagt
gagaagagtatgaatctgcatgactatggcatgctgctgccctgtggaattgacaaattt
cgtggcgtggagttcgtttgctgcccattagcagaggaaagtgacaatcttgactcagct
gatgctgaagatgacgattcagatgtctggtggggaggcgcagatgcagactatgcagat
ggaagtgatgataaggtagtagaagaacagccagaagaagacgaagagttaactgttgtg
gaagatgaagatgccgatgatgatgatgacgatggtgatggtgatgaaattgaagagaca
gaggaagagtatgaggaagcaactgaaagaactaccagcattgcaaccaccaccaccaca
actacagagtctgtggaagaggttgtcagagaggtgtgctctgaacaagccgagacgggt
ccctgccgcgcgatgatctcccgctggtactttgacgtggccgaaggaaaatgcgcgccc
ttcttttacggcggctgcggcggcaacaggaacaactttgactcggaggagtactgcatg
gcagtctgcggcagcgtcctccctaccacagctgctagcactcctgatgctgttgacaaa
tacttggagacacccggggatgaaaatgaacatgcccatttccagaaagccaaggagaga
cttgaagccaagcatcgtgaaaggatgtctcaggtcatgagagaatgggaagaagcagaa
cgccaagcgaagaacttgccaaaggctgacaagaaagctgttatccagcattttcaggag
aaagtggaatcactggaacaagaagcagcaaatgaaagacaacagctggtggagactcac
atggcacgggtggaagccatgctgaatgaccgtcgccgcattgctctggagaactatatc
acagccctacagactgtcccacccagacctcgtcacgtattcaacatgctgaagaagtac
gtgcgtgctgagcagaaagacagacagcatactctcaaacactttgaacacgtccgcatg
gtagacccaaagaaagctgcccaaatcagatctcaggttatgacacatctacgtgtgata
tatgaacgcatgaaccagtctctctccttcctctacaatgtgcctgctgtggctgaggaa
atccaggatgaagtcgatgagttgcttcagaaagagcaaaactactctgatgacgttctg
gccaatatgatcagcgaacctagaatcagctatggaaacgatgctctcatgccttcattg
acggaaactaagaccacagttgaacttcttccagtggatggagagttcagtctagatgac
cttcagccatggcatccctttggtgttgattctgttccagccaatactgaaaatgaagtt
gagccagttgatgcccgccccgctgcagacagaggactcaccacacgaccaggttctggg
ttgaccaatgttaaaacagaagagatatctgaagtcaagatggatgcagagttccgacat
gactcaggatatgaagtgcatcatcaaaagctggtgttctttgctgaagatgtgggttca
aataaaggtgccatcattggactaatggtgggaggtgttgtcatagcaacagtgattgtc
attactttggtgatgctgaagaagaagcagtacacatctattcatcacggggttgtggag
gtggatgctgcagtgacaccagaggagcgccacctttccaagatgcagcaaaatggctac
gaaaaccccacctacaagttctttgaacagatgcagaattag
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