Cygnus atratus (black swan): 118247551
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Entry
118247551 CDS
T09349
Symbol
USP5
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 5 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cata01002
]
118247551 (USP5)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cata04121
]
118247551 (USP5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cata04147
]
118247551 (USP5)
Enzymes [BR:
cata01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118247551 (USP5)
Peptidases and inhibitors [BR:
cata01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118247551 (USP5)
Ubiquitin system [BR:
cata04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118247551 (USP5)
Exosome [BR:
cata04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118247551 (USP5)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_9
UBA_4
UBA_3
Motif
Other DBs
NCBI-GeneID:
118247551
NCBI-ProteinID:
XP_035401496
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Position
1:100587797..100601127
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AA seq
855 aa
AA seq
DB search
MAELSEALLSVLPSIRVPKAGDRVHKDECAFSFDTPESDGGLYICMNTFLGFGKQYVEKH
YQKTGQRVYLHLKRTRKPKEEDANSSAGDPPRKKPTRLAIGVEGGFDITEEKFEYDEDVK
IVILPEHLDIPRDGLEGLPDMVRDRIASAVEAILTADSASRKQEVQAWDGEVRRISKHAF
SLHQLQNDVRIPPCGWKCSKCDMRENLWLNMTDGAILCGRRYFDGSGGNNHAVEHYRETG
YPLAVKLGTITPDGADVYSYDEDDMVLDPNLAEHLAHFGIDMLKMQKTDKTMTELEIDMN
QRIGEWELIQESGVQLKPLFGPGYTGIRNLGNSCYLNSVMQVLFSIPDFQRKYVDKLEKI
FQSAPSDPTQDFSTQVAKLGHGLLSGEYSKPVSAEGEQQPDQKGVQNGIAPRMFKSLIGK
GHPEFSTNRQQDAQEFFLHFINMVERNCRSSENPNEVFRFLVEEKLKCLATEKVKYTQRV
DYIMQLPVPMDAALNKDELLEYEEKKRQAEEEKQPLPELVRAKVPFSSCLEAYGAPEQVD
DFWSTALQAKSVALKTTRFASFPDYLVIQIKKFTFGLDWVPKKLDVSIEMPEELDISALQ
GTGLQDGEEEMPDIAPPLVTPDEPKGSLGFYGNEDDDSFCSPHFSSPTSPMLDESVIIQL
VEMGFPMDACRKAVYYTGNSGVEAAMNWVMSHMDDPDFANPLVLPGSSGPGSTIACPDPP
SEDSVATIVSMGFSRDQAMKALRATNNSLERAVDWIFSHIDDLDAEAAMDISEGRSAADS
ISESVPVGPKVRDGPGKYQLFAFISHMGTSTMCGHYVCHIKKDGRWVIYNDQKVCASEKP
PKDLGYIYFYQRIPS
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctgagcgaggcgctgctctcggtgctgccgtccatccgcgtgcccaaggcc
ggcgaccgggtccacaaggacgagtgcgccttctccttcgacacgccggagtcggatggc
ggcttgtacatctgcatgaacaccttcctgggcttcgggaagcagtacgtggagaagcac
taccagaaaacgggccagcgggtctacctgcacctcaaaagaacacgtaaaccgaaggaa
gaagatgctaattccagtgctggggaccccccaaggaaaaaaccgactcgcttggctatt
ggtgtagaaggtggatttgacatcacagaggaaaagtttgaatatgatgaagatgtaaaa
atagttattttaccagagcatttggatattccccgtgatgggctggagggactccctgac
atggtcagagacaggattgccagtgcggtggaggccatcctgactgcagattcagcctca
cggaagcaggaggtgcaggcttgggatggggaggttcgacgtatttccaaacacgctttt
tccctgcaccagcttcagaatgatgtccgcatcccaccatgtggctggaagtgcagcaag
tgtgacatgagggagaacctgtggctgaacatgaccgacggagccatcctttgtggccgg
cgctatttcgatggcagtggtggcaacaatcacgcggtcgaacattaccgggaaactggc
tacccactggctgtgaaactgggaacaattactcctgatggggctgacgtctactcctac
gatgaggatgacatggtgttggatcccaacctggcagaacaccttgctcactttgggatt
gacatgctcaagatgcagaagacagacaagacaatgacagaactggaaatagacatgaat
caacgcattggggagtgggagctcatccaggagtctggtgtgcagctcaagcccctcttt
gggcctgggtacactggtatccgtaacctgggcaacagttgctacctcaattctgtgatg
caggtgctgttcagtatcccagacttccagagaaagtatgtggacaagctggagaagata
ttccaaagcgcaccgtcggaccccacacaggacttcagcacacaagtagccaaactgggt
cacggactgctgtctggggagtattcaaagccggtttctgcggaaggggaacagcagcct
gatcagaagggtgtgcaaaatggcattgctccacgcatgtttaagtccctcattggaaag
ggacacccagagttttccactaaccgacagcaggacgcccaggagttctttctgcacttc
atcaacatggtggagaggaactgccgcagctcggagaaccccaatgaggtctttcgtttt
ctggtggaggaaaagctgaagtgcctggccacagaaaaggtgaaatatacccagcgtgtg
gactatatcatgcagctacctgtgcccatggatgctgcactcaacaaagatgaactactg
gaatatgaggagaagaagcggcaggcagaggaggagaagcagcctctgcctgagctggtg
cgagccaaggtgcctttcagctcctgcctagaggcctatggagctccagaacaggtggat
gatttctggagcacagccttgcaggccaagtctgtggctctcaaaacaacacggttcgcc
tctttcccagattatttggtgatccagatcaagaaattcacttttggtctggattgggtg
cccaaaaagcttgatgtctccattgaaatgccagaggagctggatatctctgcactgcag
ggaacagggctgcaagatggagaagaagaaatgccagacatcgcgcccccactggtgaca
ccagacgagcccaaaggtagcctggggttctatggcaacgaggacgacgactccttctgc
tcccctcacttctcctctccgacatcccccatgctggatgagtcagtgatcatacagcta
gtggagatgggctttcccatggacgcctgccgcaaagccgtgtattacacggggaacagt
ggggtcgaggctgccatgaactgggtcatgtcacacatggatgatccagactttgctaac
ccattagttctcccgggatccagtggaccagggtcaactattgcttgtccagaccctcct
tcagaagacagtgtggccaccattgtctcaatgggcttctcccgggaccaggctatgaaa
gcgcttagagcaacgaacaacagcctggagcgtgctgtggattggatctttagtcacatt
gatgacctcgatgcggaagctgctatggatatctcagagggacgctcagcagcagactcc
atctctgaatctgtccctgttggtcctaaagtgcgcgatgggcctggaaaatatcagctg
tttgccttcatcagccacatgggcacttcgactatgtgcggccactacgtttgtcacatc
aagaaagatggcaggtgggtgatctacaacgaccagaaagtctgtgcttctgagaagccc
cccaaggatctgggctacatctacttctaccagcggattcccagctag
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