Cygnus atratus (black swan): 118247572
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Entry
118247572 CDS
T09349
Symbol
U2AF1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118247572 (U2AF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cata03041
]
118247572 (U2AF1)
Spliceosome [BR:
cata03041
]
Complex A
U2 snRNP components
U2 related factors
118247572 (U2AF1)
Complex B
118247572 (U2AF1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
zf_CCCH_4
Torus
Motif
Other DBs
NCBI-GeneID:
118247572
NCBI-ProteinID:
XP_035401540
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All DBs
Position
1:complement(115835153..115849025)
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AA seq
306 aa
AA seq
DB search
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ
SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKNEGHQVTNLEQRNESVKQLKLWFCRAYLWMNSGPGIDPGRGPVNVGLDP
EIVVVEVVVEEEEDANVIGGGQEIVKDPVDSEPCHFYCMSARKCCSLTKQVHNEIFFKDG
LLNKNL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtacctggcctccatcttcggcaccgagaaggacaaagtcaactgttcattt
tatttcaaaattggagcttgtcgtcatggagacagatgttctcggttgcacaacaaacca
acatttagccagaccattgccctcttgaacatttaccgtaaccctcaaaactcttcccag
tctgctgacggtttgcgctgtgctgtgagcgatgttgagatgcaggaacattatgatgaa
ttctttgaggaggtcttcacagaaatggaagaaaaatacggcgaggttgaagagatgaac
gtttgtgataaccttggagaccatctagttggaaacgtatacgtaaagtttcgccgtgaa
gaagatgccgaaaaggctgtgattgacctgaacaatcgctggtttaatggacagcccatt
catgctgagctttcacctgtgaccgacttcagagaggcctgttgccgtcaatatgaaatg
ggggagtgtacacgaggaggtttctgcaacttcatgcatttgaagcccatttctcgagag
ttgagacgcgagttgtatgggcgtcgtcgtaaaaatgaagggcatcaagtgaccaactta
gaacaaaggaatgagtctgtaaaacaactgaagttatggttctgtcgggcatatctgtgg
atgaattcaggacctggcatagatccaggtcgaggtcccgtgaacgtcggtctagatcca
gagatcgtggtcgtggaggtggtggtggaggaggaggaggacgcgaacgtgataggaggc
ggtcaagagatcgtgaaagatccggtcgattctgagccatgccatttttactgtatgtct
gctagaaagtgttgtagtttgaccaaacaagttcataatgagattttttttaaagatggg
cttctgaataaaaatttgtag
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