Cygnus atratus (black swan): 118247677
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Entry
118247677 CDS
T09349
Symbol
RUNX1
Name
(RefSeq) runt-related transcription factor 1 isoform X2
KO
K08367
runt-related transcription factor 1
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118247677 (RUNX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cata03000
]
118247677 (RUNX1)
Transcription factors [BR:
cata03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
118247677 (RUNX1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
TagH_SH3-like
Motif
Other DBs
NCBI-GeneID:
118247677
NCBI-ProteinID:
XP_035401770
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All DBs
Position
1:complement(111957159..112136764)
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AA seq
472 aa
AA seq
DB search
MASNSIFESLPSYQHFLRDTSTSRRFTPPSTTLSPGKMSEPLPLPGAEHSGALAGKLRSA
DRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMA
GNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIK
ITVDGPREPRRHRQKLDEQTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRASLN
HTTAFNPQPQSQIQDTRQVQPSPPWSYDQSYQYLGSIATPSVHPATPISPGRASGMTSLT
AELSSRLSGASDLTAFSDPRVGIDRSFSALPSISDPRMHYPGAFTYTPTPVSSGIGIGMS
AMSTATRYHTYLPPPYPGSSQAQGSPFQTSSPSYHLYYGTSAGSYQFSMISGGDRSPPRI
HPPCTNASTGSTLLNPNLPNQSDVVEAEGSHSNSPTNMGTTARLEEAVWRPY
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaacagcatatttgagtcacttccttcttaccagcacttcttgagagatacc
agcaccagccgccgcttcacgccgccctccaccacgctgagcccggggaagatgagcgag
ccgctgccgctgcccggcgccgagcacagcggcgccctggcggggaagctgcgcagcgcc
gaccgcagcatggtggaggtcctggcggatcaccccggggagctggtgcgcaccgacagc
cccaacttcctctgctccgtgctgcccacccactggcgctgcaacaagacgctgcccatc
gccttcaaggtggtggccttgggagacgtgcccgatgggacgctggtgacggtaatggct
ggaaatgatgaaaactactccgcagaactcagaaatgcaacagctgccatgaaaaaccaa
gtagcaaggttcaacgacctcagatttgtgggtagaagtggaagagggaaaagcttcacg
ctgaccatcacagtcttcacgaaccctccacaagtagccacgtaccacagagccatcaag
ataacggtggatggacctcgtgaacccagaagacatcgtcagaaactagatgagcagaca
aagcccgggagcttgtccttttcagagcgcctgagtgaactggagcagttgcgtcgtacg
gccatgagggtcagcccacaccacccagcccccacacccaacccacgagcctccttgaac
cacaccactgcttttaaccctcagcctcagagtcagattcaggacacgaggcaagtacag
ccgtctccgccgtggtcctacgaccagtcctatcagtacctgggctccatcgctaccccc
tcggtgcaccctgccacgccgatatcacccggcagggccagcggcatgacatccctcacc
gcagagctttccagccgcctctctggtgcttccgatttgacggcattcagtgaccccagg
gtggggatcgaccgctccttctccgcgctcccttccatttcagatcctcggatgcactac
ccgggagcgttcacctacacgccgacgcccgtcagttcggggataggaatcggtatgtct
gccatgtccacggccacgagataccacacttatctcccgcctccgtaccccggctcctct
caggcccaaggcagcccgttccagaccagctcaccctcgtaccacctctactacggaacc
tcggctgggtcctatcagttctccatgatctcagggggagaccggtctcccccacgcatc
caccctccttgcaccaatgcttccacgggatcaacactcctcaaccccaaccttcccaac
caaagcgatgtggttgaggcagaagggagccacagcaactccccgactaacatgggcacc
acagcaaggctagaggaagcggtgtggcgaccatactga
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