Cygnus atratus (black swan): 118247793
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Entry
118247793 CDS
T09349
Symbol
DSCAM
Name
(RefSeq) LOW QUALITY PROTEIN: cell adhesion molecule DSCAM
KO
K06767
Down syndrome cell adhesion molecule
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cata04515
]
118247793 (DSCAM)
Cell adhesion molecules [BR:
cata04515
]
Immunoglobulin superfamily
DSCAM family
118247793 (DSCAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
Ig_5
C2-set_2
Pur_ac_phosph_N
Ig_4
C1-set
V-set_CD47
Sp38
Interfer-bind
fn3_2
C2-set_3
ChitinaseA_N
DUF6377
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
118247793
NCBI-ProteinID:
XP_035401949
LinkDB
All DBs
Position
1:complement(114249519..114651369)
Genome browser
AA seq
2002 aa
AA seq
DB search
MIRFISVHIFSEDLHASLYFVNASLQEVVFASTTGTLVPCPAAGIPPVTLRWYLATGEEI
YDVPGIRHVHPNGTLQIFPFPPSSFNNLIHDNTYYCTAENPSGKIRSQDVHIKAVLREPY
TVRVEDQKAMRGNVAVFKCIIPSSVEAYITVVSWEKDTVSLVSGPRFLITSTGALYILDV
QNEDGLYNYRCITRHRYTGETRQSNSARLFVSDPANSAPSILDGFDHRKAMAGQRVELPC
KASGHPTPKYRWLKDNVPWEPDSRFRQTVTGLLIENTHPSDSGNYVCEVWNNYGTAEMIG
RLYVKQPLKATISPRKVKSSVGSQVSLSCSVTGTEDQELSWYRNGEIINPGNNVRITGVN
RENLIMDGMAKSDGGAYQCFVRKDKMSAQDYVQVVLEDGTPKIISAFSEKVVSPGEPVSL
MCNVKGTPLPTITWTLDEDPIVKDGSHRISQIITSEGNVVSYLNISNTQVRDGGVYRCIA
NNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTYIHCRVIGYPYYSIKWYKNSNLLPF
NHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQPFEFPR
FSIGQRVFIPCVVVSGDLPITITWQKDGRPIPASLGVTIDNIDFTSSLRISNLSLMHNGN
YTCIARNDAAAVEHQSQLIVRVPPRFVVQPSDQDGIYGKAVILNCSAEGYPVPTIVWKYS
KGAGVPQFQPIALNGRIQLLTNGSLLIKHVLEEDSGYYLCKVSNDVGADVSKSMYLTVKI
PAMITSYPNTTLATQGQKKEMSCTAHGEKPIIVRWEKEDRIINPEMSRYLVSTKEVGDEV
ISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEIEIREVRARSIALRWT
MGFDGNSPITGYDIECKNKSDSWDSVQRTKDVSPQLNQATIIDLHPSSTYNIRMYAKNRI
GKSEASNELTITTDEAAPDGPPQDVQLEPVSSQSIRVTWKAPKKHLQNGIIRGYQIGYRE
YSAGGNFQFNIISIDTTGDSEVYTLNNLKKFTQYGMVVQACNRAGIGPSSQEIITTTLED
VPSCPPGNVQATATSPETISISWSTLAKETLNGILQGFRVIYWANLLDGELGEIKNVTTT
QPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAASSASTVF
VSWLPPLKLNGIIRKYTVFCSHPYPTVISEFEASPDSFSYRIPNLSRNRQYSVWVVAVTA
AGRGNSSEIITVEPLAKAPARILTFSGTVTTPWMKDIVLPCKAVGDPAPTVKWMKDSNGT
PSLVMIDGRRSIFSNGSFVIRTVKAEDSGYYSCVASNNWGSDEIILNLQVQVPPDQPRLT
VSKTTSSSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLETLKCGTW
YKFTLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVRLNLIGWNDGGCPI
TSFTLEYRPFGTTVWTTAQRTSLSKSYILYDLQEATWYELQMRVCNSAGCAEKQAKFATL
NYDGSTIPPLIKSVVQSEEGLATNEGLKMLVTISCILVGVLLLFVMLLIVRRRRREQRLK
RLRDAKSLAEMLMSKNTRTSDTLNKQQQTLRMHIDIPRAQLLIEERDTMETIDDRSTVLL
TDADFGETSKQKSLTVTHTVHYQSVSQATGPLVDVSDARPGTNPTTRRSAKTGPTARNRY
ASQWTLNRPHPTISAHTLTTDWRLPTPRPAGSVDKESDSYSVSPSQDTDRARSSMVSTES
ASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQLTAGTNDYTDSLTSSTPSES
GICRFTASPPKPQDGGRVMNMAVPKAHRPGDLVHLPPYLRMDFLLNRGVQGASRDLGLGQ
ACLEPQKSRTLKRPTVLEPIPMEASSTRDVQSWQPGAVATLPQREGAELGQAAKMSSSQE
SLLDSRGHLKGNNPYAKSYTLV
NT seq
6009 nt
NT seq
+upstream
nt +downstream
nt
atgatcagatttatttcagttcacattttcagtgaagatctacacgccagtctatatttt
gtcaatgcatctctgcaagaggtagtgtttgctagcaccacagggacattggtaccctgt
ccagcagcagggatcccccctgtgacgctcagatggtatctagcaacgggcgaggagatc
tacgatgtcccagggatccgccacgtccaccccaatggcactctccaaattttccccttc
cctccttcaagctttaataacttaatccatgataacacttactattgcacagctgaaaat
ccttcagggaaaatcagaagtcaggatgttcacattaaggccgttttacgggaaccctat
acagtccgtgtggaggaccagaaagccatgagaggcaatgtagcagtgttcaagtgcatt
atcccctcctctgtggaggcatatatcactgttgtctcatgggagaaagacacagtctcg
cttgtctcaggacctagatttctcatcacatccacgggagccttgtatattttagatgta
cagaatgaagacggactgtacaactaccgatgtatcacaaggcacagatacactggagaa
acacgacaaagcaacagtgcaagactttttgtatcagatccagcgaattcagctccatct
attctagatgggtttgaccaccgtaaagccatggcaggacagcgagtggagctgccttgc
aaagcatcagggcaccccacaccaaagtatcgttggctgaaggacaatgttccctgggag
cctgacagcaggtttcggcagacagttacaggtctgctgatagagaacacgcatccctca
gactcaggcaactacgtctgcgaggtgtggaacaactatggtactgctgagatgataggg
cgactatatgtaaaacaaccactaaaagccacaatcagtccacggaaagtaaaaagcagt
gttggtagccaagtgtccttgtcctgcagtgtgacaggaactgaggaccaggagctctcc
tggtaccgtaatggtgaaatcatcaaccctggtaacaatgtccggatcactggggtcaac
cgggagaaccttattatggatggcatggctaagagtgatggtggagcataccagtgcttt
gtgcgtaaggacaagatgtctgctcaagattatgttcaggtggtactagaagatggaact
cccaaaatcatttctgccttcagtgagaaagtggtgagtccaggagagcctgtctctctt
atgtgcaatgtgaaggggacccccctgcctaccatcacttggacactggacgaagatccc
attgtgaaggatggcagtcatcgtatcagccagattatcacctctgaagggaacgtggtc
agttacctgaatatctctaacactcaggtccgagatggtggagtttatcgctgtattgcc
aacaactctgctggagtcgtcctgtaccaggctcgaataaacgtaagagggccagcaagt
attcgaccaatgaaaaacatcacagcaatagcaggacgggacacctacatccactgccgc
gtaattggctacccatattactccatcaaatggtacaagaactctaacctgttacccttt
aaccatcgccaagtggcgtttgagaacaacgggacactgaagctttcagatgtgcagaag
gaagtagatgagggtgaatacacatgcaatgtcctcgttcagccccagctgtccaccagc
cagagtgttcacgtgacagtaaaagttccaccttttattcagccttttgagttcccaagg
ttctccattggacagcgggtcttcattccctgtgtggtggtctccggagatctgcccatc
accattacctggcagaaggatggcaggcccatcccagccagccttggggtgaccattgac
aacatcgacttcaccagctccttaaggatctctaatctttcgctgatgcacaatgggaat
tacacctgtatagctagaaatgatgcagcagctgtggagcaccaaagccaattaattgtg
agagtgccccctaggtttgtggttcaaccaagcgaccaagatgggatatatggaaaagct
gtaattctcaactgctctgcagagggttatcctgttcctaccattgtctggaagtactca
aaaggtgccggagttcctcagttccagccaattgcactgaacggtcgtatccagcttctc
acaaatggttccttgctgattaaacatgttttggaagaagacagtggatactacctctgc
aaggtcagcaatgatgtgggagcagacgtcagcaagtccatgtacctcactgttaaaatt
ccagctatgataacttcctatccaaacaccaccctcgcaacacaaggtcaaaagaaggag
atgagctgcacggcacatggagagaaacccatcatagtccgctgggagaaagaggaccga
atcattaaccctgaaatgtcccgttatcttgtttccaccaaggaagttggagatgaagtg
atctctactctgcagattttgccaactgtacgtgaagattctggcttcttttcctgccat
gccatcaattcttatggggaggatcgcggaataattcagctcactgtgcaagagccccct
gaccctcctgagatagaaatcagagaggtgagagcgcgcagtattgccctcagatggacc
atgggatttgatggaaacagccctatcactggctatgatattgaatgcaagaataagtca
gactcttgggattctgttcagagaaccaaagatgtttcccctcagctaaaccaagccact
atcattgacctccacccttcctcaacttacaacattcgcatgtatgccaagaaccgcatc
ggcaagagtgaggccagcaatgagctcaccatcacaactgatgaagcagctcccgatggt
ccacctcaggatgttcagcttgagcctgtatcttcacaaagcattagagtcacctggaag
gctccaaagaagcacttgcaaaatggaattatccgtggataccagataggttatcgggag
tacagtgcaggaggcaatttccagtttaacatcatcagtattgataccacaggggacagt
gaagtttatacactgaataacctgaaaaaattcacccaatatggcatggtagtccaggcc
tgtaaccgggctggaataggaccttcttctcaggaaatcatcaccacgactcttgaggat
gtgcccagttgtcctccagggaatgtgcaagccactgcaacatcaccagaaacaatttct
atttcttggtcaacactggcaaaagaaacactgaatgggattctgcaaggattcagggtt
atctactgggccaatctcttggatggagagctaggagaaataaagaatgtcaccaccacg
cagccatcactggagcttgatggtctggaaaaatataccaactacagcatacaggtgttg
gctttcacacgagctggagatggagtgagaagtgaacaaattttcacccgcactaaagaa
gatgttccaggtcctcctgctggtgttaaagcagctgcatcttcagcctccaccgtcttt
gtgtcctggctccctcccctcaagctcaatggcatcatccggaaatacaccgtattctgc
tcacacccctatcccacggtaatcagcgagtttgaagcctctcccgactcattttcctac
agaatccccaacctgagtcggaatcgccagtacagcgtctgggtggtagcagtgactgct
gcaggaagaggcaacagcagcgagatcatcactgtagaaccactagcaaaagctcctgcc
aggattttgacgttcagcggcacagtgacaactccctggatgaaggacattgtcctccct
tgcaaagctgttggagacccagctccaacagtgaaatggatgaaggatagtaacgggaca
cccagtctagtgatgattgatggacgaagaagcatctttagcaatggcagctttgtcatc
cgtactgtgaaagcagaagactctggatactacagctgtgtggccagtaacaactgggga
tcagatgaaataattttgaatttacaggtacaagttccaccagaccagccaagacttact
gtgtccaaaactacatcttcctccatcactctttcctggatacctggagacaatggtggc
agttctatccgaggttatattttgcagtactcagaagataacagtgagcagtggggcagt
tttcccattagccctagtgagaggtcctaccgcttagaaacattgaaatgtggcacttgg
tacaagtttactctaactgcacagaatggagtggggccaggacgcatcagtgagatcatt
gaggccaaaacgcttggaaaagagccacagttttcaaaggaacaagaactctttgctagt
atcaataccacaagagtaaggctgaacctgataggctggaatgatggtggctgccccatc
acctccttcaccctggagtaccggccatttgggacgacagtctggacaactgctcagcgg
acatccctgtcaaagtcctacatactgtatgacctccaggaggcaacctggtacgaactg
caaatgagagtatgcaacagtgctggctgtgcagagaaacaagccaaatttgcaacgctt
aattatgatggcagtacaatccctccactcattaagtcagttgtgcaaagtgaggaaggg
ctggcaaccaacgaagggctaaagatgctggtgaccatttcctgtatcttggttggggtc
ttgctgctttttgtgatgctgctgattgtgcgaaggaggaggagggagcagagactgaag
aggctgcgagatgcaaagagtttggctgaaatgcttatgagcaagaatacccggacatca
gatacacttaataagcagcagcaaacgctgaggatgcacatagacattcccagagcacag
cttttgattgaggagagggacacgatggagaccattgatgacagatcaacagttctacta
actgatgctgactttggagagacgtctaaacagaagtcactgactgtcacccacacagta
cattaccagtctgtgtcacaggctacaggaccactggtggatgtttctgatgcccggcca
ggaacaaatcctaccacaaggaggagtgccaaaaccggacccacagctcgcaaccgctat
gctagtcagtggaccctcaacagacctcaccccaccatatcagctcataccctcaccaca
gactggaggcttcccacccccaggccagcaggatccgtggacaaggaaagcgacagctac
agtgtcagcccctcacaggacacagatcgagcaagaagcagcatggtctccacagaaagt
gcctcctcaacatatgaagagctagcaagagcatatgagcatgcaaaaatggaagagcag
ctgagacatgccaagttcaccattacagaatgcttcatatcagacacgtcgtcagagcag
ctcacggcagggactaatgactacacagacagtctgacctcaagcacgccgtcagagtcg
gggatttgcaggtttactgcgtccccccccaaacctcaggatggagggcgagtgatgaac
atggcagttccaaaggcacatcggccaggtgatctcgtgcatttgccaccgtacctccgg
atggactttttgttgaaccgtggcgtgcagggcgcgagcagagacctgggtttggggcaa
gcctgcttggagccacagaaaagccgaaccttgaagcgccccactgtcctggagccgatc
cccatggaggcatcctccacgagagacgtccagtcatggcaacctggtgctgtggcaacg
ttacctcagcgagaaggagctgagctaggacaggcagcgaaaatgagcagctcccaagaa
tccctgctggactcccggggccacttgaaaggaaacaacccctacgcaaaatcttacacc
ctggtataa
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integrated database retrieval system
