Cygnus atratus (black swan): 118247827
Help
Entry
118247827 CDS
T09349
Name
(RefSeq) neural-cadherin-like
KO
K27892
neural-cadherin
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cata04515
]
118247827
Cell adhesion molecules [BR:
cata04515
]
Cadherins
Cadherin related
118247827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Ig_Shg
CADH_Y-type_LIR
Cadherin_CELSR2_9th
EGF
Cadherin_pro
Fibulin_C
EGF_2
hEGF
Y_Y_Y
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
118247827
NCBI-ProteinID:
XP_035402020
LinkDB
All DBs
Position
2:136294205..136337105
Genome browser
AA seq
2634 aa
AA seq
DB search
MPRAAVLLLPPLLALCGATEGLGGPGLPPGPRRYAARLPPGARVGDTVFTLPPGREAGGW
FEMAAPGQAPLGVDRASGRLYLRGELPAGGGAEALVKVHRGGGRDNDWYLCHVTLLAPEE
ELLSWAMYPYPYLARVDPDARKGTLVYQLAARYSTSENTSAGLTYTLVAGGEERFQVDAD
TGVIRTTGLPLAWNKEYVVTVQASDEYGSKSPYASISVLAGSRPPQFTNMSYSVFVPENT
PAGEKIAVVEAVSFQSQPLSYSLLTNPSGLFSVRQGSGELHLSQPVDYEGEHHLYHLLLK
ATEAESELSSVTEVVVHITDENDCSPEFQHSIYTRDNIPETVPVGTSLLQVLATDCDSGS
NSEISYFVQSTDFSITHHGVINSNQRLNFERANHMYEFVVIAVDKGHPPRTGTASVRVRM
ANVNDEAPVFSQPVYRTFISEDAGPSTLVATVQAKDPDGDGVLYLIAGGNEEGNFELDSQ
KGIIKLRRSPLPSLKGPQYVLNITAIDDNISGGPTPLSSFAEVIVGVNDVNNNKPVFREC
TYYSDSTWVLENQPPGTYVLQVKAYDADLGVNGEVKYGLMHRDGASLGFSIDPDTGVITT
TQSFDREKQREHTLSVTATDQAQEPLIGVCQITIFIADVNDNDPKFENSRYQYFLSEDTP
VGTSFLRIAAHDSDQGVNAAVTYSMLEHQVEYFQINPSTGWVYVNRLISQATRISCYVVA
TDGGNRSSTVELTVTITSVLSQLPRWERSRYWVTIPENTIRDTRIVTIKATSPLGDPRVT
YNLEEGQVPETNMPVRFYLKPNRADGSASILVAEPLDFETTKFFTLRVWAQNVAMMPLAS
FTTVCVNVTDVNDNVPFFMSSSYEVSVPEGADVGTSVVQVLATDLDSGLHGEVHYFILKD
ASEDYRFFTIERKTGIISTHASFDREERASYLIEVQSQDSSESARPGVHGQPNTDTAYVR
IFVSDVNDNTPAFPQSVYEISIDEDRDVGSPVVTATANDQDEGANAKLRYQITSGNAEGV
FDVEPEAGTVFIVQSLDYEQEQRYELRLVASDGKWENHTLIIINVVNKNDEAPVFTQNEY
YGSVLEELTDLPAFVLKVSATDPDQAADQNAISYSLHGQGAGSEFSINENTGEISTSRRL
DREKRSTWRFLVLATDESGEGLTGFADVIIEVRDVNDNAPLFLCVSDSCFTGHIPEDSPA
DTAVMDMTAVDFDDPKAGTNAVLTYRIVQNVQNEINLNLFSINSVSGTIYTMLGSLDREK
EDRYILVVEAKDGGGLTGTGTATILVTDVNDHAPVFLQRIYTAFVSENASINTEVAVVSA
VDRDEGENAVVTFSILDGDNDRKFSMETDKVNNCGFIRLRKRIDFEKPHERVFNLTLKAE
DMDFFSIAHCVIYVEDANDHAPVFYPQFYEVAALGEDVPVGTKVVQVSAVDLDSGLNGRF
SFHLLNKSDPGGQFSVASDGWVVVAGLLDYEAVTRYQLIVIATDMGQPPLAGSATVLVTL
RDVNDNGPEFEAHYNPVVWENTASPQVVQMNETSALLYAKDRDTAANGAPFSFHLLSNFD
SLDNFHLQDFHNGSAQLTALRTFDREMHKVFYLPILITDSGIPPMSSTNTLTVNIGDQND
HPHSAGYMECLIYSYDGILPMTILGQVRAPDNDDWDRKIYQFEGKTSRYFILNDNSGLLT
IKEGTPPGTYNIRVRVIDGVWPDVVSTVKVTVKEIKDDALRNAGSIRIKGITPEEFISQS
PEKESKYNQMKKLLSEIMSAPFENVHIFSVLNSPSQTQGVDVWFAVYGPPYYKAEKLNGN
VAASRAWLENILDINITQIGIDECVTANCTHSSGCISKYEQSHVPTITTAGSVSLVSVTV
LSSALCGCAARESSHLSCSSYKTNPCLNGGTCVDTDLGYRCKCSPNFHGPDCQQTKHSFR
GHGYAWFPPLKPCFESRISLEFITEVPDGLLLYQGPVARGQPGELKDFVALELSGGVPSL
TVSHGSGELFLQLSPKVNVADRRWHNIKIINDGKKVKLVLDHCVNIIRDSNSVVKKMSPV
DLSACEASEETVETWSMGRLFSGHQPLQLGGVKKTLPYHTSQKHFKGFVGCIRNVVVDSK
VYDLEHPAESLNSAPGCVLTDEMCQSAGVASCGVHGKCVGGWDFFRCDCSPGYAGPACDK
VLPEWAFGRDSWIHYEPRSTRSTRSTRIRLMVRTRISRSTLLSLASADGSGYLRLEVDGG
FFCVNISLGDKNHSLRMKTLRINSGQWVLLTMERYNNEFTLRVNSGGGDQEVTSVLGTNR
WFEMDWASVVLGNRFPSHSESDFQGCLRDVQLNGQPLLVEGKSTEFGLILRRQGVTMGCH
SSACSSQPCYSPFLCVDLWRKYECRCPAGKVEVVDSLTGLRHCTSSACGHWTCRNGGTCV
AQSQDKTICQCPEGYRGRWCEISQVKAGRPVGLSSGSILAISMCLLVFLALLVSYTVWSQ
WGSSGFRKGGIYHIPEERESWEDVRENVLNYNEEGGGERDQTAYDINELKKPLRNLPHLT
LRATSPYSRTPTGRKRDPVPKCAHQKQATSAVGSVPDFKEYVSQIICDADNDLQSFPADT
IHFYCLEGECSLAGSLSSLDSISDDEDLNYDCLHEWGSKFDKLKELCELSDELF
NT seq
7905 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgggctgccgtgctgctgctgccgcctctgctggccctctgcggggccaccgag
gggctggggggtcccgggctgccccccggcccccggcggtacgcggcccgcctgcccccg
ggggcgagggtgggcgacaccgtgttcaccctgccgccgggccgggaggcgggcggctgg
ttcgagatggcggcccccgggcaggccccgctgggggtggacagggcgtcggggcgcctc
tacctcaggggggagctgcccgcgggcggcggcgccgaggcgctcgtcaaggtgcacaga
ggagggggacgagacaacgactggtacctctgccacgtcaccctgctggccccagaggag
gagctcctgtcctgggccatgtacccgtacccctacctggcacgcgttgatccagacgcc
cgcaaaggcaccctcgtctaccagctcgctgcacgatacagtaccagcgaaaacaccagc
gctggcctaacttacacactagttgcaggtggtgaggagcgatttcaggtagatgcagac
accggggttatcaggacgacgggcctgcctctggcgtggaacaaggagtacgtggtcacc
gtgcaagcctcggatgagtatggcagcaagagcccctatgcctccatctccgtcctggca
ggctcccggcctccgcagttcactaacatgtcctacagcgtgtttgtccccgaaaatact
ccggcgggagaaaaaatagcagtggtcgaggctgtttccttccagagccagcccctttcg
tactcgctgctgacgaaccccagcgggctgttcagcgtcaggcaggggagcggggagctc
cacctgagccagcctgtggactacgagggcgagcaccacctctaccacctcctcctgaaa
gccacggaagctgagagcgagctgagcagcgtgaccgaggttgtggtccatatcacggat
gaaaacgactgttctcctgagttccagcactccatttacaccagggacaacattcctgaa
accgttcctgtcggcacgtctcttctgcaagttcttgccacagactgcgactctggctcc
aactcagagatctcctacttcgtccagagcactgatttttccatcacgcaccacggggtc
atcaattctaaccagaggctgaactttgagcgagcaaaccatatgtatgagttcgtggtg
atagctgtcgataaaggacatccccctcggacaggaaccgcgtccgtgcgcgttcgaatg
gccaacgtgaatgacgaggctcctgtgttctcccagcccgtttacagaaccttcatctca
gaagacgctggtcccagtaccttggtggccactgtccaggccaaagaccctgatggagat
ggggtgctgtacctaattgctggaggtaacgaggagggcaattttgaactggatagtcag
aaaggtatcattaagctccgccgaagcccgctgcccagcctgaaagggccgcagtacgta
ctgaacatcactgccatagatgacaacatctcaggggggcccacccctctcagcagtttt
gctgaggttattgtaggagttaatgacgtaaataacaacaagcctgtcttcagagagtgc
acttactacagtgacagcacctgggttctggagaaccagcctccagggacgtacgtgctg
caggtgaaagcctacgatgcagacctcggcgttaatggagaggtgaagtacgggctcatg
caccgcgacggagcttccctgggcttcagcattgacccagacacaggggtcatcaccacc
acgcagagctttgaccgcgagaagcagagagagcacacactgtctgttaccgccaccgac
caagcgcaggagccgctgatcggcgtctgtcagatcaccatctttatcgctgacgtcaat
gacaacgatcccaagtttgagaacagtcgctatcagtatttcctcagcgaagacactcca
gtggggacgagtttcctccgtattgcagctcatgacagtgaccaaggtgtgaacgcggcc
gtcacttattcaatgttggagcatcaagtggagtacttccagatcaaccccagcacgggc
tgggtgtatgtgaaccgcctgatctcccaggccactcgcattagttgctatgttgtagca
acagatggaggcaacagaagcagcactgtggagctgaccgtaaccatcaccagtgtgctc
agccagctgccccggtgggagcggagcagatactgggtaacaatccccgaaaacaccatc
cgtgacaccaggatagtgaccatcaaagccacatcccctcttggtgatcccagggttacg
tataacctggaggagggtcaagttccagagacaaacatgccagttcgtttctacctgaag
ccaaacagagccgatggatctgcttctattctggtcgctgaaccacttgacttcgagaca
accaagttcttcaccctgcgagtctgggcacaaaacgtagcgatgatgcctctagcttcc
ttcaccactgtttgtgttaatgtaacagatgtcaacgataacgtgccattcttcatgtct
tccagctacgaggtgtccgtgccagaaggagctgatgttggcacatctgtggttcaggtt
ttagctacagacttggattctggtctacacggagaggttcactactttatattgaaagat
gctagtgaggactacaggttcttcaccattgagcgcaaaacaggaattatttccacacat
gcgtcttttgacagagaggaaagagcgtcctacttgattgaagttcagtctcaggactct
tcagaatctgctaggcctggtgtccatgggcagcccaatacagacacagcctacgtaagg
atttttgtcagtgatgtgaatgacaacaccccggcatttcctcagtcggtgtatgagatc
agcatagatgaggacagggacgttggaagtcctgttgtgacggcaacagcaaatgatcaa
gatgaaggtgcaaacgccaaactcaggtaccagatcacatcaggaaatgcggaaggagtt
tttgatgtggaacctgaggctggaactgtcttcattgttcagtcactggattatgaacaa
gaacaacgttatgagctccggcttgtagcatctgatggaaagtgggaaaatcacactctt
atcatcatcaatgttgtgaataagaacgatgaagcaccagtcttcactcagaatgagtat
tatggcagtgtcctggaggaactcacagatctgcctgcgtttgttctaaaggtttctgca
acagaccccgaccaagcagctgatcaaaatgccattagctattccctgcacggacagggg
gccggtagcgaattcagcatcaacgagaacacgggcgagatcagcacaagcagaaggttg
gaccgcgagaagcgatcaacatggcgcttcctcgttctagcaacagatgagagtggagag
ggactgactggcttcgcagatgttatcatagaagtgagggacgtgaacgacaacgcgccc
cttttcctctgtgtctcggatagttgtttcacgggtcacatccctgaggattccccagca
gacacggctgttatggacatgaccgcagtggactttgatgacccaaaagctggcacgaat
gctgtactaacctacagaatcgttcagaacgtccaaaatgaaattaacctgaacttgttc
tcaattaactccgttagcggcaccatctataccatgcttggctccctggaccgggagaag
gaagacaggtacatactggtggtggaggccaaagacggaggagggctcactgggacaggc
accgccactattttggtgactgatgtgaacgaccatgctccggtcttcctgcaaagaatc
tacacggcatttgtctccgagaacgcgagcattaacaccgaggtcgcagtggtgtctgcc
gtggacagagatgagggggaaaatgccgtggtgacattcagcatcctcgacggcgacaac
gaccgcaagttctccatggagacagataaagtcaacaactgcgggttcatccggctgcga
aagcggattgactttgagaagcctcacgagagggtgttcaatttgactctgaaagcagag
gacatggatttcttcagcatcgctcactgtgtgatctacgtggaggatgccaatgaccat
gctccggtcttctacccccaattctatgaagtggctgctctgggggaagacgtgcctgta
ggcaccaaagttgttcaggtgtctgctgttgacttggattctggcctgaacggaaggttt
tctttccacctgctgaacaagtctgacccaggtggccagttctctgtggctagtgatggc
tgggtggtggttgcaggactgctggattatgaggcagtgacgcggtaccagctcatcgtt
attgccacagatatggggcagccccctctggcaggcagtgccactgttctagtgactctg
cgggatgtaaatgacaacgggccagagtttgaggctcattataacccagtggtctgggaa
aacacagcttctcctcaggtagtccaaatgaatgagacgtctgctttgctgtatgctaag
gaccgagacactgctgctaacggagcacccttctccttccatttactcagcaattttgat
agtctggataacttccacttgcaggatttccataatggaagtgcccagctcactgcattg
cgtacctttgacagggaaatgcacaaggtcttctacctgcccatcctgatcacagacagc
gggattccaccgatgagctccaccaacacattaactgtgaatattggggaccagaacgac
cacccgcattctgctggttacatggagtgcctcatctacagctacgatggtatcctaccc
atgaccatcctgggacaagtccgtgcccctgataatgatgattgggatcgcaaaatctac
caatttgaaggaaaaacatcaaggtactttatccttaatgataactcaggtttgctgact
attaaagaaggaaccccaccaggaacatacaacataagagttagagtcattgatggagtc
tggccagacgttgtctcaaccgtaaaggttacggtgaaggagatcaaagatgatgccctc
cgtaatgctggttctatacgaataaaaggtatcaccccagaggagttcatatcccaatcc
cctgaaaaagagagtaaatacaaccagatgaagaagctgctttcagaaatcatgtctgcc
ccatttgaaaatgttcacattttcagtgtgttaaatagcccaagtcaaacccaaggcgtt
gatgtttggtttgcagtttatggtccaccctattataaagcagaaaaacttaatggcaac
gttgcagcctccagagcgtggctggaaaacatcttggatataaatatcacccagattggc
attgacgaatgtgtgactgcaaactgcactcatagcagcggatgcatcagcaagtatgag
cagagtcatgtgccaacgataaccacagctggaagtgtttcgctggtgtctgtgacagtc
ctgagcagtgccctgtgtggctgtgcagctcgggagagttcccatctctcctgctcctca
tacaagacgaacccttgtctcaacggtggcacgtgtgtggatactgatttgggctacaga
tgcaaatgctctcctaatttccacggaccagactgccagcagacaaaacacagcttcaga
ggccacggttacgcctggttccctcctctcaagccttgctttgagagccgcatctccttg
gagtttatcaccgaagtccccgacggccttctgttgtaccagggaccagtagcacgaggg
cagcctggagagctgaaagatttcgtggcgttggagctttctggtggtgtcccatcgctg
actgtcagccatggctctggcgagcttttcctgcagctgtccccaaaagttaatgtcgca
gatcgtcgctggcacaatataaaaattataaatgatggaaagaaagtgaagctggttctt
gaccactgcgtaaacatcattagagatagcaacagcgttgttaagaagatgtccccagtg
gatctgtctgcctgtgaagcctctgaagagactgtggaaacttggagcatgggtaggctc
ttcagtggccatcagcccctacagctggggggcgttaagaagactttgccttaccacacc
tcacaaaagcacttcaaagggtttgttggctgcattcgcaacgttgtcgttgacagtaag
gtctatgatttagagcaccctgcagagtccttgaacagcgctcccgggtgcgtccttacg
gatgaaatgtgtcagagcgctggggtggcctcctgtggtgtccatggcaagtgcgttggt
ggctgggacttctttcgctgtgactgctccccaggatatgctggcccagcatgtgacaaa
gttcttccagagtgggcttttggaagggacagctggatccactacgagccgaggagcact
cgcagcactcggagcactcggatccggctgatggtgcgcacccgcatctcccgcagcacc
ctgctcagcttggcctctgcagatgggagcgggtacctgcggctggaggtggatgggggg
tttttttgcgttaacatcagcttgggggacaaaaatcactctctgagaatgaagacgtta
cgtataaatagcggccagtgggttctgctgaccatggagcgctacaacaacgaatttact
ctgcgtgttaacagtggtggaggtgatcaagaagtgacctctgttttgggcacgaacaga
tggtttgaaatggattgggcaagcgttgtgctaggaaaccgctttcccagtcattcagag
agcgatttccaaggttgtttacgtgatgtccagctgaatggtcagccacttctcgtggaa
ggcaagagcacagagtttggcttaattctgaggcggcagggtgtcacgatgggatgccat
tccagtgcctgcagcagccagccctgttacagccctttcctttgtgtagacctgtggaga
aaatacgaatgccggtgtccagctgggaaagtggaagtggttgatagccttactgggctc
agacactgtacctcctcagcttgcggacactggacctgtaggaatggaggtacctgcgtg
gctcaatcccaagacaagaccatctgccagtgccccgaaggctacaggggaagatggtgt
gaaattagccaggtgaaggctggaagacctgttggactcagctctggctctattctggct
atcagcatgtgtctccttgtcttcctagctctcttggtctcttacacggtgtggagtcag
tggggaagttcagggtttcggaaaggaggaatttaccacattcctgaagagcgtgaaagc
tgggaggatgttagagaaaatgtcttaaattataatgaagaaggaggtggagaacgtgac
cagactgcttacgatataaatgaactgaagaaacctctccgtaaccttccccacctgacc
ttgagggcaacttctccatactccaggacacccactggccgaaaaagagacccagtacca
aaatgtgcacatcaaaaacaagcaacatcagctgttggaagtgttccagacttcaaggaa
tatgtttctcaaatcatctgtgatgcagacaatgatctacagagtttcccagctgacact
attcatttttactgcctcgaaggagaatgctctcttgcagggagccttagttccttagac
tccattagtgatgatgaagatctaaattatgattgcctccacgagtgggggtcaaagttt
gacaaacttaaagaactctgtgagctctcagatgaacttttttaa
DBGET
integrated database retrieval system