Cygnus atratus (black swan): 118247988
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Entry
118247988 CDS
T09349
Symbol
RAD54B
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118247988 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cata03400
]
118247988 (RAD54B)
DNA repair and recombination proteins [BR:
cata03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
118247988 (RAD54B)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
TusA
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
118247988
NCBI-ProteinID:
XP_035402357
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All DBs
Position
2:complement(136036784..136100111)
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AA seq
946 aa
AA seq
DB search
MSGACAARPAGDGGGRIERPGLRAVQPNMRRSAAPSQVLGNVAKKPRFIPPGKSNALCPK
TETKEVDQDMKLKEVNEQQGSASGLSKIYRQNQNVNFTRSVDSTGKVKTTTACNSGNKCS
RLEMKMLSTPKADATYLPTSGTATEEAAQEEPDCLTKYFSVVWCKASKKKHKKWEGDAVL
VTKGKSVILKDMEGKDIGRGTGYKPKELDSLDEGQTLMIGGKEIEVMGVISADDFSSGRC
FQTGIATHDTVPTALPQATMKRFCKPFKNVCQPNTKENILNNSQSCKPRHDPNASNSLVM
PRPNASHQWMFNKAGLPVVDVVVDPYIANNLRPHQKEGIVFLYECVMGMRVSGRFGAILA
DEMGLGKTLQCISLVWTLLRQGVYGCKPVLKRALIVTPGSLVKNWKKEFQKWLGSERIKV
FTVDQDHKVEEFISSPLYSVMIISYEMLLRYLEQIQAMEFNLLICDEGHRLKNSSIKTTT
ALTSLSCERRIILTGTPIQNDLQEFYSLIEFVNPGVLGSLSTYRKIYEEPIVRSREPSAT
KEEKELGESRAAELTRLTGLFILRRTQEVINKFLPPKXESIIFCRPTALQLELYRKLLSS
QVIRSCLQGRLENSPHLICIGALKKLCNHPCLLFKAIKEKSCDPMNDEHDESSLYEGLTD
VFPQDYTSDTFSETDSGKLQVLVKLLAAIHELNSSERVVLVSNYTQTLNILQETCKSYGY
SYTRLDGHTPVSQRQHIVDSFNSKFSPAFIFLLSSKAGGVGLNLVGASHLILYDIDWNPA
TDIQAMARVWRDGQKHTVHIYRLLTTGSIEEKIYQRQISKQDLSGAVVELSKTSEHIHFS
VEELKNLFTLHEDSSCVTHDLLECDCMGNKDHQNPSSEKPSASRSCQLGQDQGKPNSKKP
LSMSQLMQWKHFSGQHQALADPFLERIKEKVSFIFQNVTSPTSPAQ
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgcatgcgcggcgcggccggcgggtgacggcggcgggcgaattgagcggccg
ggcctgagagcagtacaaccaaatatgaggcgatcggcagctccaagtcaagtgctagga
aatgtagccaaaaagccgaggtttataccaccaggaaaaagtaatgcactttgtcccaag
actgaaactaaggaggtggaccaagacatgaaattaaaggaggtaaatgagcaacaggga
agcgcttcagggctttctaaaatataccgccagaatcaaaatgtaaattttacacggtct
gtggactcaactgggaaagtaaagacaacaacagcgtgtaacagcggtaataagtgcagc
aggttggaaatgaaaatgctaagtacgcccaaagctgatgcaacgtatttgccaacatca
ggaacggcaacggaagaagcagcgcaggaagaacctgactgccttacaaaatatttcagt
gttgtgtggtgtaaggcatcaaagaaaaagcacaagaagtgggaaggtgatgctgttctt
gttacaaaaggaaagtcggtaatattgaaagatatggaaggcaaagacattggaagaggt
actggatataaacctaaagagttagacagtcttgatgaaggtcaaacactgatgattgga
ggaaaagaaattgaagtgatgggtgtaatttcagcagatgacttcagcagtggcaggtgt
tttcagactggaatagcgactcatgacacagtcccaactgctttacctcaagctactatg
aaacgattctgtaaaccgttcaaaaatgtctgtcaacccaatactaaagagaatattctc
aacaattctcaaagctgcaaacctcgccatgatccaaatgcttcaaattctctagttatg
ccgagaccaaatgcaagccatcagtggatgttcaataaggctggtttacctgtggtggat
gtagttgtggatccttacattgcaaataatctccgaccacatcagaaagaaggaattgta
tttctatacgaatgtgtaatgggaatgagagttagtggcagatttggagctattcttgct
gatgaaatgggcttaggaaaaactttgcaatgcatttcacttgtctggactctcctgcgt
caaggggtctatggatgcaaacctgtactaaagcgagcactaattgtgacccctgggagt
ctggtaaaaaactggaaaaaagaatttcagaaatggttgggaagtgaaaggatcaaagtc
tttacagttgatcaggaccacaaagtagaagaattcatcagttctccactttattcagtt
atgataatcagttatgagatgctgctacgatatttggaacaaattcaggcaatggaattt
aacctcctgatctgtgatgaaggacatcgtctgaaaaatagctccattaagacaactaca
gcccttactagtctgtcttgtgagaggagaattatccttactggtactccaatccaaaat
gacttgcaagaattttattcattaatagagtttgtaaatccgggagtacttggttcttta
tccacatatagaaagatatatgaggagccgattgtcagatccagagaaccttcagcaaca
aaggaggaaaaggaattaggagaaagcagagcagcagaactcacgcgcctcactggactc
tttattcttaggagaacacaggaggttataaacaaatttctccccccaaaanaggagagc
ataatcttctgccgaccaacagcactgcagcttgaactgtatcgaaaactgcttagttct
caagttattagatcctgtttacaaggcaggctagaaaatagtcctcacctaatatgtata
ggagctttgaaaaaactttgcaatcacccatgtcttctgtttaaagccataaaggaaaaa
agctgtgatccgatgaatgatgaacatgatgagtccagtctctacgaaggtctaacagat
gtctttccacaagattatacttctgacactttctctgaaactgattcaggaaaattgcag
gtgctggtgaagttgttagcagcaatccacgagctcaattcttctgaaagagtcgtacta
gtatccaattacactcagacattgaacatattacaggagacatgcaaaagttatggatac
tcttatacgagacttgatggacatacgcctgtctctcagaggcaacatatagttgatagt
tttaacagtaaattcagtccagctttcatcttcttgctgagttcaaaagctggcggagta
ggactgaatctggttggagcatctcacttgatcctgtatgatatcgactggaatccagct
acagatattcaggcaatggccagagtgtggagagatggtcaaaaacatactgtacatatt
tacagactgctaaccacaggctcaatagaagaaaagatttatcaaagacagatcagcaaa
caagatctttctggggcagttgtagaactttccaagacttccgaacacatccatttttct
gttgaagagctcaaaaatctcttcacacttcatgaagattctagctgtgttacccatgac
ttgcttgagtgcgattgtatgggaaacaaagaccatcaaaatccttcctcagaaaagcct
tctgcatctagaagctgccagcttggacaagaccaggggaagcctaattcaaagaaacca
ctctctatgtcacagttgatgcaatggaaacatttctctgggcagcatcaggctctagct
gatcctttccttgaaaggatcaaagagaaagtttctttcattttccagaatgtaacgagt
ccaacttcccccgcccaataa
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