Cygnus atratus (black swan): 118248037
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Entry
118248037 CDS
T09349
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
118248037 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cata03400
]
118248037 (XPC)
DNA repair and recombination proteins [BR:
cata03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
118248037 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
118248037
NCBI-ProteinID:
XP_035402489
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Position
10:10542073..10553719
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AA seq
966 aa
AA seq
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MARKRKASIPAAAASKKRPGGPRAEVKKEEEEEEEDDFEEKKPSIKKNKPKVPATKKKED
SDPGVSKSASKPSKQKGVKLLAKENKKITENKGNHSKEQTCSDSLKTPQRETKLKRESPV
KKEMDEDNTDDNDDNDDDSEDEWEDVEELQEPVTDKLEEAAVLSSVALPSNPVEIEIETP
EQRKKRERGEKRKAEFESYLRRMMKRFSKEVREDTHKVHLLCLLANGFYRNRICSQPDLH
AIGLSIIPTHFTKVPAGQVDILYLSNLVKWFIGTFTVNDELSTEKGESLQSTLERRFAIY
AARDNEELVHIFLIILRALQLLCRLVLSLQPIPLKETTAKGKGSSKRQSLSSTSEGRESS
GTTPKAVAKKCPCKKAKKDEKSSGSEEDNKEPEKPRTARTKRTHKSKLTSGSQEQKEISN
EESGLGEKDVPVRPKNDRRRRVASKVCYKEESGSDEGSVSDFEISEEESDLSDADFETVS
KKQRRSLGSQKSKLTSIKSPKTETSESKQSKNCSGVEPRPVKSTAPALPQAPRKRNKIIS
SDEDDGQQVVRKVVGTDQWLEVFLEREDKWVCVDCVHGSVGQPQQCFTYSTKPLYYVVGF
DNDGSVKDVTQRYDPVWMTTTRKNRVDPEWWEDTLQPYRSPFVERDEKEEREFQVKLQDQ
PLPTAIGEYKNHPLYALKRHLLKYQAIYPESAAILGYCRGEAVYSRDCVHTLHSKDTWLK
QARVVRIGEVPYKMVKGYSNQARKARLAEPANRDKEDLALFGRWQTEEYQPPIAVDGKVP
RNEYGNVYLFLPSMLPVGCVQLRLPNLNRLARKLDIDCAQAITGFDFHGGYSHPVTDGYV
VCEEYKEVLIAAWENEQAEIEKKEKEKREKRALGNWKLLTKGLLIRERLKQRYSIKTEPS
APETEKGAGFSSDEEGGPSSGTAGRDVAISWPQNRQVEKQKEEQTTKKSKREKKGEAAQL
FPFEKL
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggaaacgcaaagcttccatcccggcggcagccgccagcaagaagcgccccggc
ggaccgagggccgaggtgaagaaggaggaggaggaggaggaggaagatgattttgaagag
aagaagcctagtataaagaagaacaaacccaaagttccagctacaaagaagaaagaagac
tctgatcctggagtttccaagtcagcaagtaaaccttcaaaacaaaaaggggtaaaattg
ctagcaaaagaaaataaaaaaatcacggaaaataaaggaaatcatagcaaagagcaaacc
tgcagtgactcactgaagacccctcagagggagacaaagttgaagagagaatctcctgtt
aaaaaagagatggatgaagacaatactgacgacaatgacgacaatgatgatgacagtgaa
gatgaatgggaggatgtggaagaactccaggaacctgtcacagataaattagaagaagct
gctgttctttcgtcagtggcgctgccaagcaatccggttgagatagagattgaaacgcca
gaacaacgtaagaaaagagagagaggagaaaaaaggaaagctgagtttgagagctatctt
cggagaatgatgaaacgtttcagcaaggaggttcgtgaggacacacataaggttcacctc
ttgtgtttattagcgaatggtttctataggaacaggatctgcagccagccagatcttcat
gccattggtctgtccatcatccccacacacttcacaaaagtgcctgcaggccaagtggac
attctctacctttccaacttggtgaaatggtttattggaaccttcactgtcaatgatgag
ctttccactgaaaaaggagagtcccttcagtcaaccttggagaggcgctttgccatctat
gctgcacgagacaatgaagagttggttcatatattcttaattattctccgagcattacaa
ctactgtgtcgccttgtgctgtctcttcagcctattcctctcaaggagacaacagcaaag
ggaaaaggctcatccaagaggcagtcactcagcagtacctctgaagggcgggaaagctct
ggcacaacacccaaagccgtggcaaaaaaatgcccctgcaaaaaagcgaagaaggatgag
aaatcctcagggagtgaagaagacaacaaggagccagagaaacccagaactgctcggacc
aaaaggacacacaagtcaaagctgacttcaggcagccaggagcagaaggaaattagtaat
gaggagagtggtttaggggaaaaagatgtgcccgtcaggcccaagaatgatcgcaggaga
cgagtggcctccaaagtgtgttacaaagaagagagtggaagtgatgagggcagtgtttct
gacttcgagatttcagaggaggagagcgatctctctgatgcggattttgaaaccgtatct
aaaaagcagagaaggtcattgggctcccagaaatcaaagctaacatctatcaaaagcccc
aaaactgagacttcagaatcaaagcaatccaaaaattgttctggagttgagcccagacca
gtcaaaagcacagctccagcattgcctcaggcaccgagaaagaggaacaaaataatttct
agtgatgaggatgatgggcagcaggtggtaaggaaagtggttggcacagaccagtggcta
gaggttttccttgagcgtgaggacaagtgggtgtgtgtggactgtgttcatggcagtgtt
ggccagccccagcagtgcttcacatattccacaaagccactttactacgttgtgggattt
gacaacgatgggagcgtcaaggatgtgacgcaaagatatgacccagtgtggatgaccaca
acgaggaagaaccgtgtggaccctgagtggtgggaggacacgctgcagccatatagaagt
ccctttgtggaaagagacgagaaggaggaaagggagtttcaagttaagcttcaagatcaa
cctctaccaacagcaattggagagtacaagaaccaccctctttatgcactgaagaggcat
ctcttgaagtatcaggcaatctatcctgagtcagctgctatcctagggtactgcagggga
gaggctgtctactccagagattgtgtacacacgctccactccaaggacacttggctaaag
caggctcgagtggtgaggattggagaagtaccttacaagatggtgaagggatattccaac
caggcaaggaaggcacgccttgcagagcctgcaaaccgggacaaagaggacctggcactg
tttggtcgctggcagacagaggagtaccagccacctatagcagtggatggaaaggttcct
cggaatgaatatggaaacgtctatctcttcttgccatccatgttacctgttggctgtgtg
cagctcagactccccaacctgaacagattggcacggaagctggacattgactgtgctcaa
gcaatcacaggatttgattttcatggtggctactcgcacccagttactgatggctacgtt
gtttgtgaagaatataaagaggtgctcattgctgcctgggagaatgaacaagcagaaata
gaaaagaaggagaaggagaagcgtgagaagagagctctggggaattggaagttgctgaca
aaaggacttctcatcagagagagactgaagcaacgctattccatcaagactgagccgtct
gcacctgagacagagaaaggagctggattctcctctgatgaagaaggaggtccaagttca
gggactgcaggacgggatgtggcaatttcttggccccaaaatcgccaggtagagaagcag
aaggaagagcagacaactaaaaagagcaagcgagaaaaaaagggagaggcagcacagttg
tttccttttgagaaactgtga
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