Cygnus atratus (black swan): 118248054
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Entry
118248054 CDS
T09349
Symbol
FGD5
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 5 isoform X2
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cata04990
]
118248054 (FGD5)
Domain-containing proteins not elsewhere classified [BR:
cata04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
118248054 (FGD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
RHG20_PH
PH_9
PH_11
PH_20
Peptidase_S48
Motif
Other DBs
NCBI-GeneID:
118248054
NCBI-ProteinID:
XP_035402517
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All DBs
Position
10:80802..181286
Genome browser
AA seq
1578 aa
AA seq
DB search
MNNAEITKPPLAPKPKIIGHLSPVTVSKFSPSLPRADILHNPNSMSRGPKPPIAPKPKLS
ADTEGKSSVYTNNNLNKCSNGKLIFLDGELYEGNQCHAHCPEPEADNEYIVVPEAQLTRK
DCNDLQHELDQSLDSSAENEVLETPEEAEKEEDNVANDEDTSNQEVEHHNSLDSAEPIEP
DSEASTVDCSQSEALCEETLDAPDENYCSSKNVDEDVVGDCSETKNKEETSSSLELVEDY
SEIDSDNILNRGKDLMGDICEDIIPTPLPTDESIPGCEKAGEDEEELPEILENGDGCPAH
DGDHSVYAQLDLNMEEELKNDDSASLDMLPNETSEETALGLELLEGEPSAENGLGDSTHQ
AAAEEEKADTDEYNNTNTENASDGCQITKRRDEETSEVACEASQDSVKEEEEAVNAENVD
DGCQIAPFENYCGEEVPTEHSDENPQTEGTSLNGNGQISDTLPSGPGMEPELEDVPVEEH
SERVVETSKSDELQLEDNEVEAKSLSKSVPSPTQQVPCEEELEVCKHGRMNVKHGTKNVL
HENLALPEVVIVPEESEERATSSDSLDDPYVLPAENEITRDGQTDSGADHSKRDELGMDG
ENNLLTIDRKSIVTRTRSLSGKMPGYVPETVPEETGPETDLLPTCNGSGTEDVSNNLFSV
EGKTMEANRALPTKSRRFILYPRSYSVEGREIPVSIYKESDGYVLDDGRIKRTEDNLSLP
CVNGSSGSFSQGNLSSGVSTPSSVVDIPPPFELAYITKKPITKSSPSLLIENESPDKYSK
KKKSSFKRFLTLKFKKKTENKVHVDVNVSSSRSSSESSYHGPLRLLELDRRSLSSSPQLK
SHVGKLRASESPSAVLFYKDGKRKGTPKSFSRSVSRVESFEDRSRPPFMPLPLTKPRSIS
FPNADTSDYENIPAMSSDYENIQIPPRRSTRAGTFTEFFEDPSRALSAANENDGYVDMSS
FTGFENKQQTTDQETESAYTEPYKVCPVSVIPVEVITSDEEQKSSEDEESSQGDPSLINK
KEGQSSAYLIAQELMSSEKVYVEMLQQSCMDLYEGIMKVLGEDEQEEVELKQGLSELSEI
YELHQEILGELEERVLKWEEHQKVADVFLSRKSRLNHHTAYIIQFDRNLALLDETCHKYS
QLATIIQEFEKSSGGSPQSVKHQLLKVVQRVFQYRVLLTDYLNNLCPDSTEYEATQAALF
IVSEITDRANESMLQGENLQKLVHIEYSVRGQRGLLQPGRVFVKEGTLMKVSGKNKHPRH
LFLMNDVLLYTYPQKDGKYRLKNTLAVSGMKVSRPVTEKAQNVLKIEYDEYCLTLSASSC
LERDDWYSCISRHIPDDYKAHNTSTFHSNVELREKLGITLGERPPTLVPVSHVMMCMNCG
CDFTLTLRRHHCHACGKIVCRNCSRNKYPLKYLKDQAAKVCDSCYMELKKRERPLSVSFP
PTSSRCSSSAFSVFHNIHYSSFKKQKKIPSALMEVAASGEGATISGYLSRCKRGKRHWKK
RWFVIKGKVLYTYTANEDKVATESLPLLGFTVAPEKEEGSMDTVFHLYHKQTLFYSFRAE
DNNSAQRWIEAMEEASIL
NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacgccgaaatcacaaagccaccactagcaccgaaaccaaaaattatcggtcat
ctttctccagtaactgtctccaaattttctccttcgctgccaagggctgacattcttcat
aacccaaactctatgtctagaggtcccaaaccacctattgctcccaagccaaaactctct
gctgacactgagggcaaatccagtgtttataccaacaataacttaaataaatgctcaaat
ggtaaattgatctttcttgatggagagctgtatgaaggaaatcaatgccatgcccattgc
ccggaacctgaagcagataatgaatacattgtagttcctgaagctcagttgaccaggaaa
gactgcaatgacttgcaacacgagcttgatcagagcttagattcctctgcagagaatgaa
gttttggaaactccagaagaggcagagaaggaagaggataacgttgctaatgatgaggac
acaagcaatcaggaagttgagcaccataactctttggatagtgctgaaccaatagaacca
gactctgaagcctcaactgtagactgtagccagtctgaagcactttgtgaggagaccttg
gatgcccctgatgagaattattgttcttccaagaatgtagatgaagatgttgtaggtgat
tgcagtgaaaccaaaaacaaggaggaaacttctagcagtcttgaactggttgaagactat
agtgagattgacagtgataacattttgaatagaggtaaggacctaatgggtgatatctgt
gaagatatcattccaacaccacttcccacagatgaatcaatcccaggttgtgaaaaggca
ggggaggatgaggaggaactgcctgagattttagaaaatggagatggatgtccagcacat
gatggtgatcacagtgtgtatgcacagcttgatttgaatatggaggaggaattaaaaaat
gatgacagtgcaagtcttgacatgctgcccaatgagaccagtgaggaaacagctcttggc
ttagaactgcttgaaggtgaacccagtgctgagaatggtttgggagattctacccatcaa
gcagcagctgaagaggagaaagcagacacagatgagtacaataatacaaacacagaaaat
gccagtgatggctgccagatcactaagagaagagatgaggagacatcagaggtagcctgt
gaagcaagccaagactctgtgaaagaggaggaagaagctgtgaatgcagaaaatgtggat
gacggctgtcaaattgctccttttgagaattactgtggtgaggaagtacccacagaacat
tcagatgagaatccccaaacagaagggacctctctgaatggaaatggtcagatttctgat
actctacctagtggtccagggatggaaccagagctggaagatgtgcctgttgaagagcat
agtgaaagggttgtcgaaacctctaagtcagatgagctgcaacttgaagacaatgaagtg
gaagcaaaaagcctcagcaaaagtgtcccaagtccaactcaacaagtcccatgtgaggaa
gagttagaagtctgtaagcatggtagaatgaatgtaaaacatgggaccaaaaatgtcttg
catgaaaatctagcactccctgaagtagtcattgtgcctgaagaatcagaggaaagagca
actagtagtgattccctagatgacccatatgtgcttcccgcagaaaatgaaatcactcgt
gatgggcagactgattcaggagctgatcacagtaagagggatgaattaggtatggatggt
gaaaacaacttgctgaccattgatcgtaaaagcattgtcactagaacacggtcactctct
gggaaaatgccaggctacgtgccagaaacagttccagaagaaactggacctgaaactgat
ttactgcctacctgcaatggctctgggactgaagatgtaagcaataatttattttcagtg
gaaggaaaaacaatggaagccaacagggcattaccaaccaagtcaagacgttttatttta
tatcctcggtcttattctgttgaagggagagaaatacctgtctccatttacaaagaaagt
gatggctatgtacttgatgatggtagaataaaaaggacagaagacaacttgtctttgcct
tgtgttaatggttcctcaggtagtttttcccagggaaatctttcatcaggtgtatctact
ccatcctcagttgttgatataccacctccttttgaacttgcctacatcaccaaaaagcca
atcactaaaagttccccttcacttttgatagagaatgagtcacctgataagtattccaag
aaaaagaagtcttcctttaagaggttcctcactctaaaattcaagaagaagacggaaaat
aaagtccatgtagatgttaatgtttcctcttcgaggtcctcatcagaatccagctatcat
gggcctctgaggctgctggagctggacaggagaagcctaagtagctcacctcaactaaaa
tcacatgtggggaagctccgtgcatctgagtctccctcagctgttcttttctataaggat
ggtaagagaaaaggaacacccaagtccttcagcaggagtgtgtcaagggtggagtccttt
gaggaccggtccagacctcctttcatgccactcccgttaacaaaacctagatccatttct
tttcccaatgctgacacttctgactatgagaacattccagctatgagctctgattatgaa
aatatacaaattcctcctcgaagatccacaagagcaggaacttttactgagttttttgaa
gatcccagcagggcattatctgctgctaatgagaatgacggctatgtggatatgagcagc
ttcactggctttgagaacaagcagcaaaccacagaccaggaaacagaaagtgcctacact
gagccttacaaggtgtgcccggtctctgtgatacccgtggaggtcatcacatcagatgag
gaacaaaagagttcagaagacgaggaaagcagccagggtgatcccagcctcatcaacaag
aaggaaggccagtccagtgcttacctcattgcccaggagctgatgtcttcagaaaaagta
tatgtggagatgctccagcagtcatgtatggatttatatgaaggtatcatgaaagtgctt
ggagaagatgaacaggaagaggttgaactcaagcagggcttaagtgaactctctgagatt
tacgaattacaccaagagatcctgggagagctggaagaaagagttcttaaatgggaggaa
caccagaaagttgctgatgtttttctctccagaaaatcaaggctgaatcaccacacagct
tacattatacagtttgataggaatttggctttgctagatgaaacttgccataaatattcc
caactggctaccatcattcaggagtttgagaagagctctggtggaagcccacagagtgtg
aaacaccagcttttgaaagtggtgcagcgtgtcttccaatatcgtgtgctgctcacagat
tacttgaataatctttgccctgattctacagagtatgaagccacacaagctgccttattc
attgtttctgaaatcacggaccgagccaacgagagcatgctccaaggggaaaacctgcag
aagctggtacacattgagtacagtgtgagggggcagaggggcctcctccagccaggaagg
gtctttgtgaaagagggaacactgatgaaagtctctgggaaaaacaagcaccctcggcat
ttgttcttgatgaatgatgttctgctgtacacatatccccagaaggatggcaaataccga
ctgaaaaacacattggctgtgtcaggcatgaaggtcagccgccctgtgacagaaaaagcc
caaaacgtcctgaagattgaatatgatgaatattgcctgacgctgtcagcaagctcttgc
ttggaaagggatgactggtacagctgcatcagcaggcacatccctgatgactacaaagct
cacaatacttccaccttccacagcaacgtggagctaagggagaagcttggaataaccttg
ggtgagaggcctcctactttggtacctgtgtcccacgtcatgatgtgcatgaactgtggc
tgtgactttaccctcactttgaggcgacatcattgccatgcctgtgggaagattgtatgt
cggaattgttcaagaaacaagtaccctctgaagtacctcaaagatcaagcagccaaagtc
tgcgacagctgctatatggaactgaagaaaagagagcggccactaagtgtgagcttccct
ccaacttcatccaggtgttcaagcagtgccttctctgtcttccacaatatccattactca
tcttttaagaaacagaagaagattccttcagctcttatggaggtggcagcctcgggagag
ggagctaccatcagtggttacctcagtagatgtaagagaggcaaaagacactggaagaaa
cgctggtttgttatcaaaggcaaagtcctctatacttacacagcaaatgaggacaaagtt
gccacagaaagtttgcctttgttgggttttactgttgccccagaaaaggaggaaggaagc
atggatacagttttccatctctaccacaagcagactctgttttatagcttccgagcagag
gataacaattcagcacagaggtggattgaagccatggaagaagcatccattttatag
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integrated database retrieval system
