Cygnus atratus (black swan): 118248133 Help Entry 118248133         CDS       T09349                                  Symbol SYNPO2 Name (RefSeq) synaptopodin-2 isoform X1   KO K24066   synaptopodin-2 Organism cata  Cygnus atratus (black swan) Pathway cata04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cata00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     118248133 (SYNPO2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:cata04990]     118248133 (SYNPO2) Domain-containing proteins not elsewhere classified [BR:cata04990]  PDZ domain-containing proteins   Other PDZ domain-containing proteins    118248133 (SYNPO2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PDZ PDZ_6 Calsarcin PDZ_2 Motif Other DBs NCBI-GeneID:  118248133 NCBI-ProteinID:  XP_035402689 LinkDB All DBs Position 4:complement(44916393..45005866) Genome browser AA seq 1274 aa AA seqDB search MLPNCTRKMGTGDYICIAMTGGAPWGFRLQGGKEQKQPLQIAKVRSKSKAAKAGLCEGDE VVSINGKPCGDLTYAEVIVLMESLTDVLQMLIKRSSSGINEALSAERENGKHDNIKNEDY RESATLQINTAKEIPHGDLCITEIYSETHQAAGESNIHFSEMKQQTTQSHRIAPKVIGTS KVLVTDESALRGKREERRPGTMVELQLSLSNDGHKSTNAPAVTLLGAEKCAPSGRGPTVQ EDGTSPVIAIPLGVKEGNIQWSSKVVQFSSGKEVKRIQGAAPSIPRVEVILDCSDREKEA PRSLAERGCVDSQVEGGQSEAPPSLLSFAISSEGTEQGEDNQHSERDHRPLKHRARHARL RRSESLSEKQVKEAKSKCKSIALLLTAAPNPNSKGVLMFKKRRQRARKYTLVSYGTGELE RDEDEGEEGEGEEGDKENTFEVSLLATSESEIDEDFFSDIDNDGKIVTFDWDSSLLEVEK KTKSGDEMQTLPESTGKGALMFAKRRQRMDQITAEQEEMKARTGHAEEQREVTMSENFQK VSSSAYQTKEEEMSRQQTCVSKSYTDVSQNHSKIVQQNGFGLAPDTNLSFQSSEAQKAAS LNRTAKPFPSGVQNRAAAPFSPTRNVTSPLSDIPAPPPYCSISPPPENFYRPVSAPATSK AAPIVWSLTEPTERIASRDERIAVPAKRTGILQEAKRRSTSKPMFSFKEAPKVNPNPALL SLVHNTEGKKGTGAGFESGPEEDYLSLGAEACNFMQSQASKQKTPPPIAPKPSVKVSPTA GTPVSPVWSPPAVAANKAPSFPAPASPQAAYPAPLKSPQYPHSPSANPPNTLNLAGPFKG PQATLASPNHTPKTPVTPSAGETKTPFEMPPAMSGKGAQLFARRHSRMEKYVVDSETVQA NMARASSPTPSLPASWKYSSNVRAPPPVAYNPIHSPSYPLAATKPSSKSAAATKNTKRKP KKGLNALDIMKHQPYQLDASLFTFQPPSTKESLAIKQTSKLPTSKQALSLRPPGAGSPTN ARASSVYSVPAYSTQPSYQSNASTLVNESYSPTGYSAFSKPETTTSPLFTAPRPKFSAKK VGVTAQERSSGRSLSLPGRPSAFISRAMSPTSPLIFQPAPDYFSKPDTAADRPGKRPTPW EAAAKSPLGLVDEAFGPQSMQESIAANVVSAARRKTLPEPPDEWKQKVSYEPPAPSGSVA LLGGKQSGIISPRKSSLSVPNATMQGGSQLQYAYCSQRSRTDPDIMSIDSRSDYGMSTAD SNYNPQPRGWRRPT NT seq 3825 nt NT seq  +upstreamnt  +downstreamnt atgctgcctaactgcaccaggaaaatgggcacaggggattatatctgcattgctatgact ggaggggcgccttggggctttagattgcaaggtggcaaggagcaaaagcagcctttgcaa atcgccaaggttcgcagcaaaagcaaagcagctaaggctggcctgtgtgagggggatgag gtggtgtctatcaatggcaaaccctgtggagacttaacctatgctgaagttatcgttctg atggaaagcttgactgacgtcctgcagatgcttatcaagagatcctccagtggaataaat gaagctttgagtgctgaaagagaaaatggaaagcatgataacataaaaaatgaggactat agggagagcgctacactacagattaatacagccaaagagataccccatggagacttatgc atcacagagatatacagtgagactcaccaggcagcaggagaaagcaacatacacttttct gaaatgaaacaacagaccacacaaagccacagaattgctcctaaagtgataggcacctcc aaagtgcttgtgacagatgagtctgctctcagagggaagagagaagaaagaaggccaggc actatggttgagttgcagttgtccctctcaaatgacggtcacaagagcaccaatgctcct gctgtgactctcctaggggcagaaaaatgcgccccttcagggagaggacccactgtacaa gaagatggaactagccctgtaattgcaattcccctgggtgtgaaagagggcaacatccag tggtcaagcaaagtagtccaattttctagtggcaaagaggtcaagaggatccaaggtgca gctccatctatccccagggtggaggtgatcctagactgttcagacagggagaaggaagca cccaggtctctagctgaaagggggtgtgttgattctcaagtggaaggagggcagtcagaa gcacctccttccctcctctcctttgcaatctcatcagaaggcacagagcagggagaagac aaccagcactcggaaagggatcacagacctctcaagcacagggcgaggcacgcaagactc cggcgaagtgagagcctgtcagagaagcaggtcaaagaagccaaatctaaatgtaaaagt attgcattgctgctgacagcagctcccaatcccaattccaagggggtgttgatgttcaag aagcgtcgtcaaagggcaaggaaatatactttagtgagctacggtactggggagctagaa cgtgacgaagacgagggtgaagaaggtgaaggtgaagagggggacaaagaaaacactttt gaagtgagtttgcttgcaacgagtgagtcagaaatagatgaagatttcttttctgacatt gacaacgacggcaagattgtgacatttgattgggatagcagtctacttgaggtggaaaag aagacaaaaagtggagacgagatgcagacgcttccagaaagcacaggtaaaggggccctc atgtttgccaagagacggcagagaatggatcagatcacagctgagcaagaggagatgaag gcacgcacagggcatgcagaggagcaaagggaagtcaccatgtcagagaacttccagaaa gtaagctcttcagcctaccaaacaaaagaggaagaaatgtcaagacagcagacctgtgta agcaaaagttacacagacgtcagccagaatcatagtaaaattgtacaacaaaatgggttt ggcttagcaccagacacaaacctctcttttcagtcctctgaagctcaaaaagcagcatct ttgaatagaacagctaaacccttcccttctggggttcaaaaccgagcagctgcaccattt tcgcccacaagaaatgtcactagtcctctttcagatataccagcacccccgccctactgc tctattagcccaccgcctgagaatttttacagacccgtatcagctcctgcaacaagcaaa gctgcgccaatcgtgtggtcactcacagagccaaccgaacgcatagcatccagagatgaa aggattgccgtgccagccaaaagaactgggatattgcaagaggcaaagagaagaagcaca tcaaaacctatgttctctttcaaagaagcacccaaagtaaatcctaatcctgccctgttg tccctcgtacacaacacagaaggcaaaaagggtactggagctggttttgagtcaggacct gaagaagactacctcagtttgggagcagaagcttgcaattttatgcagagtcaagcatct aaacaaaagacccctcctcctattgctccaaagccttcagtcaaggtctctcctactgct ggtaccccagtttcacccgtttggtcacctccagctgtggctgctaacaaggctccttct ttcccagctccagcctcacctcaggcagcgtaccctgcaccactcaaatccccacagtat cctcattctccttctgccaatcccccaaatactctcaacctcgctggtcctttcaaaggg cctcaggcaacgctagcgagtccaaaccacacacccaagacaccagtcacaccaagtgct ggagaaacaaagacgccctttgagatgccaccagctatgagtggaaaaggagcacaacta tttgccagaaggcactctcgaatggagaagtatgtggtcgattcagagactgtgcaagca aacatggcacgagcctcatctccaactccatctttaccagcttcttggaaatattcatct aatgtccgagcacctccacctgtagcttacaatcccatccacagcccatcttatcctctt gctgctaccaaaccttcctctaagtctgctgctgctaccaaaaataccaaaagaaaacct aagaaaggtctcaatgccttggatattatgaaacatcagccttaccaacttgatgcgtct ttatttacttttcaacctccaagtactaaggaaagcctagctattaagcagacatcaaag ttgcctacttcaaagcaagctctgtctttacgaccacctggtgctggctctcctactaac gcccgggcatcttcagtgtactccgtgccagcctacagtacacagccttcatatcagtca aatgcctctaccctagtaaatgagtcctattcacctacaggctactctgcattttctaag ccggaaacaaccacttcccctttgtttactgctccgaggccaaaattttcagcaaagaaa gttggcgtcactgcacaggaaagaagcagtggacgctcattatcacttcctgggaggcct tctgcatttatttctcgagccatgtctcctacttctcctcttatatttcagcctgcccct gactacttcagcaagccagatacagcagctgacaggcctggcaagagaccgactccctgg gaagcagcagcaaaatcccctcttggcctagtggatgaagcttttgggccccaaagtatg caggaatccattgctgctaacgtagtatcagctgctcgcaggaaaacacttcctgagcca ccagatgaatggaaacaaaaagtttcttatgagcccccagccccaagtggtagcgtagcc ttattaggagggaagcagtcgggtattatatcaccccgaaaaagctccctgtctgtcccg aatgccaccatgcagggtggctctcagttgcagtatgcttactgcagccaacggtcccga acagatcctgatataatgtccatcgattccaggtctgactatggcatgtcaacagctgat tcaaactacaatccacagccaaggggatggaggcgtccaacatga

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