Cygnus atratus (black swan): 118248144
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Entry
118248144 CDS
T09349
Name
(RefSeq) contactin-4 isoform X1
KO
K06762
contactin 4
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cata04515
]
118248144
Cell adhesion molecules [BR:
cata04515
]
Immunoglobulin superfamily
Contactins
118248144
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_5
V-set_CD47
Sp38
Ig_C17orf99
C2-set_2
Pur_ac_phosph_N
Tissue_fac
fn3_4
Motif
Other DBs
NCBI-GeneID:
118248144
NCBI-ProteinID:
XP_035402710
EnsemblRapid:
ENSACYG00000009458
LinkDB
All DBs
Position
10:complement(2365055..2670767)
Genome browser
AA seq
1029 aa
AA seq
DB search
MRLLWELLVLQSFMVCLADDNTLHGPVFLQEPSSVIFPLDSEEKKVKLNCEVKGNPRPTV
GWKLNGTNIDIGMDYRYSAVEGNLLINNPNKTQDSGTYQCVATNPFGRIISREAKLQFAY
LENFKTRTRSTVSVRQGQGMVLLCGPPPHSGELTYAWIFNEYPSFVHQDNRRFVSQETGN
LYIAKVEASDVGNYTCVVTNTVTNSRVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPSA
KGTTVKLECFALGNPVPTISWRRADGKQIPRKARRHRSSGLLEIPNFQQEDAGLYECVAE
NVRGKNVARGQLTFYAQPNWIQKISDAHAAIEESVFWECRASGRPKPSYRWLKDGEPLLP
QGRVQIEQGSLTIANVSLSDAGMYQCVAENRHGIIFASAELSVIAVGPDFSKTLLKKLTL
VKVGGEVIIECKPKASPRPTYSWKKGKDILRENERITFLDDGSLRIVNVTKADAGSYTCV
ATNHFGTASSTGSLVVKDPTRVMVSPFSMDVTVGESIVLPCQVSHDHSLDIMFTWSFNGH
LIDFEKDGDHFERVGGQDSAGDLMIRSIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPG
PPEAVTIDEITDTTAQLSWRPGADNHSPITMYVVQARTPFSVGWQAVSTVPEVIDGRTFT
ATVVGLNPWVEYEFRVVAANLIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVI
TWETVPEELQNGGGFGYVVAFRPFGTVSWMQTVVASPDASRYVFRNETLPPFSPYEVKVG
VYNNKGEGSFSPVTVVYSAEEEPTRAPTTVFARSLSASDVEISWAPPQENQHKGRIQGYE
VRCWRHDEKEENAKKIRTVGNQTSTKVTNLRGNALYHLAVKAYNTAGTGPSSTTVNVTTK
KPPPSQPPGNIIWNSSDSKIILNWDQVKALDNESEVRGYKVLYRWNRQSSASVIETNKTS
VELSLPFDEDYIIEIKPFSDGGDGSSSEQIRIPKISNAYARGSGSSTSNACTLSAISTIM
ISLTARSSL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgctatgggagctgctcgtgctgcagtcgttcatggtgtgccttgcagacgac
aacacactgcacgggccagttttcctgcaggaaccgagcagcgtgatcttcccgttggat
tcagaggaaaagaaagtgaagctgaactgtgaagtgaaaggaaatcccagaccaaccgtt
gggtggaaattaaatgggaccaatattgacatcggtatggattaccgctacagtgcagtg
gaaggcaacctgttgatcaataatcccaacaaaacccaagacagtggaacgtaccaatgt
gtagcaacaaacccatttggaaggatcattagcagagaagcaaagctgcagtttgcctat
ctcgaaaacttcaagaccagaacaagaagcactgtatctgtccgccagggccagggcatg
gtgctgttgtgtggaccaccacctcattctggagagctcacctacgcctggatcttcaat
gagtacccgtcgtttgtgcatcaggacaaccgccgcttcgtttcgcaggagactggcaat
ctgtacatcgcgaaggtggaagcttcagatgtgggaaactacacgtgcgtggtgacaaac
acagtgaccaacagccgggtcctgggacccccaaccccgctcatcctcaggaacgatggg
gtgatgggggagtatgagccgaaaatagaagtgcagttcccagaaacggttccatctgca
aaaggaacaacggtgaaactggagtgctttgccctgggaaacccagttcctacgatcagc
tggaggagagcagatgggaaacagataccccgaaaagctaggagacacagatcaagtgga
cttctagaaatcccaaattttcagcaagaagatgctggactctatgagtgtgtagctgaa
aatgtgagagggaaaaatgtggcacgaggacagctgacgttttatgctcagcccaactgg
attcagaaaatcagcgatgcacacgcagccattgaggaaagtgttttctgggaatgccgt
gcgagtgggaggccgaagccctcgtaccgctggctgaaggacggggaaccactgctgccc
cagggcagagttcagatagagcagggctcactgacgatagcgaacgtcagcctgtcggat
gccgggatgtatcagtgcgtagcagaaaacagacatggcatcatttttgccagtgcagaa
ctgagtgtcatagctgtcggtccagatttttccaaaactctcttgaaaaagttaactctt
gtgaaagtgggtggtgaagtaatcattgagtgtaagccgaaagcttcccccagacctact
tattcttggaagaaaggaaaagacatcctaagagaaaatgagagaatcacgtttttggat
gacggaagcctccggattgtcaacgtcaccaaagccgatgcgggaagctacacctgcgtg
gcgaccaaccacttcggcacggcgagcagcacgggcagtctggttgtgaaagatccaaca
cgggttatggtgtcacctttcagcatggacgtcaccgttggagaaagtattgtcttgcct
tgtcaggtatctcatgatcactcgctagatatcatgtttacctggtcattcaatggacac
ctgatagactttgaaaaagatggggaccactttgaaagagttggagggcaggattcagct
ggtgatttgatgatcagaagcatccagctgaagcatgctgggaagtatgtctgcatggtg
caaacaagtgtggacaagctatcggctgctgcagacctgattgtaagaggtcccccgggc
ccaccagaagctgtgaccatcgacgaaatcaccgacaccaccgctcagctgtcctggaga
cctggagcagacaaccacagccccatcacgatgtacgtggtgcaggccaggacccccttc
tcggtggggtggcaggcggtgagcacagttccagaggtcatcgatggtaggacattcaca
gcgaccgtggtgggtctgaatccttgggtcgagtatgaatttcgagtagtggctgccaac
ctaattgggattggagagccaagcagaccttcagagaagagaagaactgaagaagctctt
cctgaagtgaccccggctaatgtcagtggaggtggcgggagcaagtctgagctagtcatt
acatgggagacggtgcccgaggagctgcagaacggaggtggctttggctatgtggtggcc
ttccgccccttcggcaccgtcagctggatgcagaccgtcgtggcctccccagacgcctcc
agatacgtctttcgcaacgagacgctgccgcccttctccccctacgaagtgaaagtgggg
gtgtacaacaacaagggtgaagggtccttcagccccgtgacggtcgtgtactcggcggag
gaagagccaaccagagctccaaccactgttttcgccagaagtctttctgcctcagatgta
gaaatttcttgggctccccctcaagagaatcagcataaaggaagaatacaggggtatgag
gtcagatgttggagacatgacgaaaaggaagagaacgcgaaaaagatcaggacagttggt
aaccaaacatccacaaaagtcaccaatttgcgaggcaacgcgctctatcacttggcagtc
aaggcctacaacactgctggcaccgggccctccagcaccacagtcaacgtcactacaaag
aagccaccaccaagtcagccccctgggaacatcatatggaattcgtcagactccaagatc
atcctgaactgggaccaagtaaaagcactggataacgagtcagaagtgagaggctacaaa
gttctgtacaggtggaacaggcagagcagcgcctctgtgatcgaaaccaacaagacctcg
gtggagctctccctgccctttgacgaggactacatcatagagataaagcccttcagtgac
gggggcgatggcagcagcagcgagcaaatccgaatcccaaagatctcaaatgcgtatgcg
agaggatccggttcttcaacctccaacgcttgcacgctgtcagccatcagcacgataatg
atctcgctcacagctcgatccagtttatga
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integrated database retrieval system