Cygnus atratus (black swan): 118248181
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Entry
118248181 CDS
T09349
Symbol
RAPGEF2
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04010
MAPK signaling pathway
cata04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118248181 (RAPGEF2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118248181 (RAPGEF2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
RA
cNMP_binding
PDZ
PDZ_6
RA_2
PDZ_2
ABhydrolase-like_N
Motif
Other DBs
NCBI-GeneID:
118248181
NCBI-ProteinID:
XP_035402793
LinkDB
All DBs
Position
4:complement(29782531..29965931)
Genome browser
AA seq
1651 aa
AA seq
DB search
MASYVDNSFRQAVMKNPAERSPQDLEIVYSYLHGMEALSNLREHQLRLMCETVRYERHEA
NEVLYYPDDIGTCWYILLSGSVFIKESMFLPRSSFGKRSAGSFRRGCECIVLEPSEMIVV
DYMDENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPVGKPPLPRGYHTLPADF
TKLHLTDSLHPQVTHVSSSHSGCSITSDSGSSSLSDIYQATESEAGDMDLSGLPETAVDS
EDDDDEEDIERASDPLMSRDIVRDCLEKDPIDRTDDDIEQLLEFMHQLPAFANMTMSVRR
ELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTYPDGRTEILCMGNSFGVSPTM
DKEYMKGVMRTKVDDCQFVCIAQQDYCRILNQVEKNMQKVEEEGEIVMVKEHRELDRTGT
RKGHIVIKGTAERLTMHLVEEHSVVDPTFIEDFLLTYRTFLSSPMEVGKKLLEWFNDPSL
RDKVTRVVLLWVNNHFNDFEGDPAMTRFLEEFENNLEREKMGGHLRLLNIACAAKAKRRL
ITLTKPSREAPLPFILLGGSEKGFGIFVDSVDFGSKATEAGLKRGDQILEVNGQNFENIQ
LSKAMEILRNNTHLSITVKTNLFVFKELLTRLSEEKRNGAPHLPKIGDIKKASRYSIPDL
AVDVEQVIGLEKVNKKSKANTVGGRNKLKKILDKTRISILPQKPYNDIGIGQSQDDSIVG
LRQTKHIPPALPVSGTLSSSNPDLLQSHHRILDFNTTPDLPDQVLRVFKADQQSRYIMIS
KDTTAKEVVIQAIREFALTATPDAYSLCEVSVTPEGVIKQRRLPDQLSKLADRIQLSGRY
YLKNNMETETLCSDEDAQELLRESQISLLQLSTVEVATQLSMRNFELFRNIEPTEYIDDL
FKLKSKTGCTNLKKFEEVINQETFWVASEILRETNQLKRMKIIKHFIKIALHCRECKNFN
SMFAIISGLNLAPVARLRTTWEKLPSKYEKLFQDLQDLFDPSRNMAKYRNVLNSQNLQPP
IIPLFPVIKKDLTFLHEGNDSKVEGLVNFEKLRMIAKEIRHVGRMASVNMDPALMFRTRK
KKWRSLGSLSQGSTNAAVLDVAQTGGHKKRVRRSSFLNAKKLYEDAQMARKVKQYLSNLD
LEMDEESLQTLSLQCEPATNTLPKNVGDKRSGKSETSPVAPRAGIQQKVQQQQQHKVNQA
LQVPAVSLYPSRKKVPVKDLPPFGINSPQALKKILSLSEEGSLDRHKKQSEDTVSSASSQ
LSSPPTSPQSSPRKGYTLAPSGTVDNFSDSGHSEISSRSSIVSNSSFDSMPVSLHDERRQ
RHSVSIVETNLGVGRIDRRILIEPDQYSLGSYAPLSENRGLYAGATVLSSPSTEELSQDQ
GDRASLDAADSGRGSWTSCSSGSHDNIQTIQHQRSWETLPFGHAHFDNSGDGAGLWASGS
HMDQLMFPDHGTKYGRQSQGREGLDQAQSRASWASSTGYWGEDSEGDTGTIKRRGGKDVS
IEAETSSITSVPAEEPKPAPMSTHIPASSSSTKGLIARKEGRYREPPPTPPGYVGIPIAE
FAEGVSHPTRKPPDYNIALQRSRMVARTCETHGTSAQQQQSHGHSTSRPVNKPQWHKPNE
SDPRLAHCQSQGFSTEEDGPPESSWTAKQLT
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctacgtggataacagcttccgccaggcggtgatgaagaacccggcggagcgc
agcccccaggatttggagattgtgtattcctatttacatggaatggaagccttgtctaat
ctgagagaacatcagctaagactgatgtgtgaaactgttagatatgaaaggcatgaagca
aatgaagtcctgtactaccctgatgatattggtacctgttggtatatcttgctgtctggt
tcagtcttcattaaagaatctatgtttcttccaaggagcagttttggcaagcgttctgca
ggaagcttcaggcgtggctgtgaatgcattgttctagagccatctgaaatgattgtggtt
gattatatggatgaaaatgaagaatattttcagcgccaagcttctcataggcaatctcga
aggagatttaggaaaatcaaccaaaaaggggagcgacaaacaattattgatactgttgat
ccttatcctgtggggaagccacctctacctagaggctaccatacgcttcctgcagatttc
acaaagctgcaccttactgacagtctccacccacaggtgacccacgtttcatctagtcac
tcaggatgtagcatcactagtgattcaggaagcagcagcctttctgatatctaccaggct
acagaaagtgaagctggtgatatggatctcagtgggttgccagagacagcagtggattct
gaggatgatgatgatgaagaagacattgaaagagcatccgatcctttaatgagtagagat
attgttagagattgcttagagaaagacccaatagacaggacagatgatgatattgaacaa
ctactggaattcatgcatcaattgcctgcttttgccaacatgacaatgtcagtgaggaga
gagctctgtgctgtaatggtgtttgcagttgtggagagagcaggaactattgtactgaac
gatggagaagagctggattcctggtcagtcattttgaatggctctgtggaagtgacgtat
cctgatggaagaacagagatactgtgcatgggaaacagttttggcgtttcccctaccatg
gacaaagagtatatgaaaggggtgatgagaaccaaagtggatgactgccagtttgtttgt
atagcccagcaagattattgccgtatcctcaatcaagtagaaaagaacatgcagaaggta
gaagaggaaggggagattgtgatggttaaggagcacagggagcttgatcgcactggaaca
agaaaaggccacattgtcatcaagggaacagctgaaaggctaacaatgcatttggtggaa
gaacactctgtggtagacccaacatttatagaagacttcctgttgacgtatcggaccttt
ctttctagcccaatggaagtggggaagaagttgttggagtggttcaatgaccccagcctc
agggataaggttacacgggtagtattgttgtgggtgaacaatcacttcaatgattttgaa
ggagatcctgctatgactcgatttctggaagaatttgagaacaatttggagagggagaaa
atgggtggacatttgaggctgttaaatatcgcttgtgctgctaaagcgaaacgaagattg
ataaccttaacaaagccatctcgagaagcccctttgccttttatcttgctgggagggtca
gaaaagggatttggcatctttgttgacagtgtcgattttggtagcaaagctacagaagca
ggcttgaaacgtggagaccagatactggaagtgaatggtcaaaactttgaaaacattcag
ctgtcaaaagccatggaaatccttagaaataacactcatctgtctatcactgtgaaaacc
aatttatttgtttttaaagaacttttaacacggttgtctgaggaaaaaagaaatggtgct
ccccacttgcctaaaattggtgatattaaaaaggcgagccgttattctatcccagacctt
gctgttgatgtggagcaggtaataggactagaaaaagtaaataagaaaagtaaagccaac
acagttgggggaagaaataaattaaagaagatacttgacaagactcgaatcagcattctg
cctcagaaaccatacaatgacattggaattggccagtctcaggatgacagcattgtagga
ctgaggcaaacgaagcacattcctcctgctttacctgtcagtggaaccctgtcatccagt
aaccctgatctactgcagtcccaccaccgcatcttggacttcaatacaactccagactta
ccagatcaagttctgagggttttcaaggcagatcagcaaagtcgctacatcatgatcagt
aaagacacaacagcaaaagaagtggtcatccaggccatcagggaatttgctctcactgca
acccctgatgcatattcactatgtgaagtctctgtcacacctgagggtgtaatcaaacaa
aggaggcttcctgatcagttatccaagcttgctgacaggatacagctaagtggcaggtat
tacctgaagaacaacatggaaacagaaaccctttgttcagatgaagatgctcaagagtta
ctaagagagagtcaaatttccctactacagctcagtactgttgaggtggctactcagctc
tccatgagaaactttgagctattccgtaacattgaacccacagaatacatagatgacttg
tttaaactgaaatcaaaaacaggttgcactaatctaaagaagtttgaagaagtaataaat
caagaaacgttctgggtagcttctgagattctaagagaaaccaaccagctgaaaaggatg
aaaatcatcaagcatttcattaagatagcactacactgcagagaatgcaagaacttcaac
tcaatgtttgctatcattagtggcctgaatttggcaccagttgcaaggctccgaactact
tgggaaaagcttccaagcaagtacgaaaaactgtttcaagatctacaggacttgtttgat
ccatctaggaatatggcaaaatatcgtaatgtccttaacagccaaaacctgcagccccct
attattcccttgtttcctgttatcaaaaaagaccttacattccttcatgaaggaaatgat
tcaaaagtggagggcttggtcaactttgagaagctgagaatgattgcgaaggaaatacgc
catgttggtcgcatggcatctgttaacatggatcctgctttaatgtttagaactaggaag
aagaagtggaggagtttggggtctctcagccagggcagtacgaatgcagctgtgctggat
gttgcacaaacagggggtcataaaaagcgtgtccgtcgcagttctttccttaatgctaaa
aaactgtatgaagatgctcagatggcacggaaagtaaagcagtatctctcaaacttggat
ctggaaatggatgaagagagcctccagactctatctctgcagtgtgagccagccaccaac
acattgccaaagaatgtaggagacaagcgatctggaaaatccgaaacatcaccggtggct
ccccgggcaggaatccagcagaaagtgcagcagcagcagcaacataaagtaaaccaagca
ttgcaggtccctgctgtatctctttatccctctcgcaagaaagtgcccgtcaaagacctc
ccaccatttggcattaactcccctcaagctttaaagaaaattctttcattatctgaagaa
ggaagtctggaccgtcacaagaaacaatctgaagacacagtatcaagtgcatcttcacag
ctgtcttctcctcccacctcaccccagagttctccaaggaaaggctatactttggctccc
agtggcacagtggataacttttcagattctggtcacagcgaaatttcttctagatccagt
attgtcagcaattcctcttttgactccatgccagtctccctgcatgatgagaggagacag
aggcattctgtcagcattgtggagacaaatcttggtgtgggaaggattgatagaaggatc
ttgattgaacctgatcaatacagcttaggctcttatgcaccgctgtcagagaacagaggc
ctgtatgctggagcaactgtgctgtcttctcctagtacagaagaactgtcacaggatcag
ggggacagagcttcgctcgatgcagctgacagtggccgtggtagctggacttcttgctcg
agtggttctcatgacaacatacaaacaatacagcaccagagaagctgggagacgctgcct
tttggacacgctcattttgataattcaggcgatggggcaggactgtgggcctcaggcagt
catatggaccaactgatgttccccgatcatggcacaaagtatggcaggcaaagtcaaggt
agggagggccttgatcaagcacagtccagagcaagctgggcatcctcaacaggctactgg
ggagaggactcagaaggtgacacaggtaccataaagcggaggggtgggaaggatgtttcc
attgaagctgaaaccagtagcataacgtctgtaccagcagaggagccaaaaccagctccc
atgtccacacacataccggcatcatccagcagtacaaaggggcttattgcacgaaaagag
ggtcggtatcgggaaccacctccaactcctcctggttatgtaggaatacctattgctgag
tttgcagaaggtgtttcccatccaaccagaaagcctccagattacaatatagcacttcag
aggtctagaatggtggcacggacatgtgagacccatgggacatcagctcaacagcagcag
tcgcatggccattcaactagtaggcctgtgaacaaacctcagtggcacaaaccaaatgag
tcagatccacgtcttgctcactgtcagtctcaagggttttccacagaggaagatggtcca
cctgaatcttcttggacagccaagcagttgacttag
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integrated database retrieval system
