Cygnus atratus (black swan): 118248182
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Entry
118248182 CDS
T09349
Symbol
LRIG1
Name
(RefSeq) leucine-rich repeats and immunoglobulin-like domains protein 1 isoform X1
KO
K24610
leucine-rich repeats and immunoglobulin-like domains protein 1/3
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
118248182 (LRIG1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
Ig_2
ig
LRR_5
V-set
LRR_9
LRR_14
C2-set_2
Ig_5
C2-set_3
LRRCT
LRR_6
DUF2201
VCD
Motif
Other DBs
NCBI-GeneID:
118248182
NCBI-ProteinID:
XP_035402790
LinkDB
All DBs
Position
10:6397128..6484663
Genome browser
AA seq
1089 aa
AA seq
DB search
MAGPLPGGGGSAALVLLVAVLGSADPAAECPGGCSCGAELLGCGGLALPEVPRDLPRWPR
HVNLSYNKLTEIDPSAFAELLNLQEVRLNNNELTTIPSLGPASSSVRALHLHHNRIRSIE
ASQLKPYVTLETLDLSFNDITEIRNGCFPQGLHIKELYLGSNRISTLEPGAFDSLSRSLL
TLRLSKNRITQLPVKAFRLPRLIQLELNRNRIRLIEGLTFQGLDSLEVLKLQRNNISKLT
DGAFWGLAKMQVLHLEYNSLTEVNSGSLYGLSSLHQLHLSNNSISRINPDGWSFCQKLHE
LILSYNNLTRLDEGSLADLGGLHVLRLSHNSINHIAEGAFKGLKNLRVLELDHNDISGTI
EDTNGAFTGLENLSKLTLLGNKIKSVAKKAFSGLEALEHLNLGDNAIRSIQADAFAKMKS
LRQLHINSDSFLCDCQLKWLPPWLVEKELQSFVVATCAHPESLKSKSIFAVLPESFVCDD
FPKPQIIIQPETTVAVLGKDIRFTCSAASSSSSPMMFAWKKDNEMLHNAEIENFAHVRAK
DGEVMEYTTILHLRHVTFAHEGRYQCIITNHFGSTYSSKARLTVNVLPSFIKTPHDITSR
TGTTARLECAAEGDPTPQIAWQKDGGTDFPAARERRMHVMPDDDVFFITDVKIEDMGVYS
CTAQNPAGSVLANATLTVLETPSLIHPLEDHVVSVGETVALQCKATGSPPPRITWLKGDQ
PLVVTERHHFTSGNQLLIVRNVVLEDAGKYTCEMSNTLGTERAHSHVSILQSLGCRKDRT
TVGIITIAVVCSIVLTSLVWVCIIYQTRKKSEEYSVTNTDETIVPPDVPSYLSSQGTLSD
RQEAVVRVDNQQPNGHIDSNGMCQTDAGRCPDVEAPTVGCRQPKLCIGYNKDTWKTEDMA
DGMLVPDKTGYGLPVVCADCSGSTDSMNVHIYPREPEYYSEGLKTMDNTYHNALSNKERS
RKRAAGTGLLHPQQCNGIAGGRRTETDGTLYPSNHDRIRPGSTTSPLLADKHGSSQSVAK
PSELNNLNLVRASPAGGSLKQLNVLPEASPALLDLQSEAEVKQALLSNGYAPTACNSIPE
LKPPNRSID
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggcggggccgttaccgggcggcggagggtcggcggcgctggtgctgctggtggcggtg
ctgggctcggccgaccccgccgccgagtgccccgggggctgctcctgcggcgcggagctg
ctgggctgcggcgggctggcgctgcccgaggtgccccgggacctgccccgctggccgcgg
cacgtaaacctgagctacaacaagttgacagagattgatccttctgcctttgcagagctg
ttgaacctgcaggaagtgcgactgaacaacaacgagctgaccaccattccctccctggga
cctgcatcttccagtgtccgtgccctccacctgcatcacaacaggatccgtagcattgaa
gcaagtcaactgaagccctacgttaccctggaaacgttggacctgagtttcaatgacatc
acggaaatccgaaacggctgctttccacagggacttcacataaaggagctctacctgggg
agcaacagaatcagcaccctggagcctggtgcttttgatagtctgtcacggtccctgcta
acacttcgtctgagtaaaaacaggatcactcagcttcctgtcaaggcgttcaggctaccc
aggctaatacaactggagctgaaccggaatcgcatccgcctgattgaaggcctgacgttc
cagggactggacagcttggaagtcctgaaactccagcgcaacaacataagcaaattgact
gatggggctttctgggggctagccaagatgcaagttctccacctggagtataacagcctg
acagaagtaaacagtggctctctctatggcctttcgtctctccaccagcttcacctcagc
aacaactccatatctcgcatcaaccctgatggctggagcttctgtcagaagctgcatgag
ctaatactctcttacaacaacctaaccaggctggacgagggaagcttggcagacctcggg
ggactgcacgtactacgattgagccacaactccatcaatcatattgcagaaggtgccttc
aagggactgaaaaacctgcgtgtcctggaactggaccacaacgacatctcaggcacaata
gaagataccaacggagccttcacaggcctagaaaacctaagcaagctaactctgttggga
aacaagatcaagtcggtggccaagaaagcgttctcagggttggaggccctggagcacctg
aaccttggagataacgccatccgctccattcaagcagatgcttttgctaagatgaagagc
ctgcggcagctccacataaacagcgacagcttcctctgcgactgccagctgaaatggttg
cccccgtggttagttgagaaagagctgcaatccttcgtggtggccacctgcgcccatcct
gagtcactgaagagcaagagcatttttgctgtcctgccagaaagttttgtgtgtgatgat
ttccccaagcctcagatcatcatccagcccgagacaacggtggcagtcctcgggaaggac
atccgcttcacttgctcggctgccagcagcagcagctcccccatgatgtttgcgtggaag
aaggacaacgagatgctgcacaacgccgagattgagaactttgcccacgtgcgggcgaag
gacggagaggtgatggagtacaccaccatcctgcacctccggcacgtcaccttcgcccac
gaaggccgctaccagtgcatcatcaccaaccactttggctccacctactccagcaaggcc
cggctcactgttaacgtgctgccctcctttatcaaaactccccacgacatcaccagccgg
acagggacgacggcgcgcctggagtgtgcggctgaaggagaccccaccccccagattgcc
tggcagaaagatgggggcaccgacttccccgcggcccgggagcgccgcatgcacgtcatg
cctgacgatgacgtcttcttcatcacggatgtgaagatcgaagacatgggtgtctacagc
tgcacagctcagaaccctgcggggtctgtgcttgcaaatgccaccctgactgtactggag
acaccgtctttgatccatccactggaggaccacgtagtgtctgtaggtgagaccgtggct
ctccagtgcaaagccacggggagcccacccccgcgcattacctggctgaaaggcgaccag
cccctggtggtgacggaaaggcatcacttcacctctggcaaccagctgctcatcgttagg
aacgttgtcttggaagatgctgggaaatacacctgtgaaatgtccaacaccctgggcacg
gagcgggcgcacagccacgtcagcatcttacagtcccttggctgtcggaaggaccgcacc
acggtgggcatcatcaccatcgctgtggtgtgcagcatcgtgctgacctccctggtctgg
gtctgcatcatctaccaaaccaggaagaagagcgaagaatacagtgtcaccaacacagat
gagactattgtgcctccagacgtgccgagctacttgtcttcacaagggactctttctgac
aggcaggaagcggtcgtcagagtagataaccaacagcctaacgggcacatagacagcaat
ggtatgtgtcagactgatgctggaaggtgtccagatgttgaagctcccactgtaggttgc
aggcagccaaagctatgtatcggctataataaagacacttggaaaactgaagacatggct
gatggaatgcttgttccagataagacaggctacggcctgccagtcgtgtgcgcggactgc
agcggcagcacggacagcatgaacgtccacatttaccccagggagccggagtactactcc
gaaggccttaagactatggataatacctaccacaacgcactgagcaacaaggaacggagc
aggaagagggctgcaggcaccggccttctccacccgcagcagtgcaatgggattgccggc
ggcaggaggacggaaacggacgggaccctctaccccagcaaccacgacaggataaggccc
gggagcacaaccagcccgctgctagcagacaaacacggctcttcgcaatcagtagcgaag
ccttcagagcttaacaaccttaatttggtgagagcttcaccggcaggagggtcactaaag
caactgaatgtccttcctgaagcttccccagcactactggatttgcagagcgaagcagaa
gtgaaacaggctctcctgtccaacggctacgcacccacggcgtgcaactccattcctgag
cttaagccaccaaacagatcgatagactga
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