Cygnus atratus (black swan): 118248224 Help Entry 118248224         CDS       T09349                                  Symbol COL7A1 Name (RefSeq) collagen alpha-1(VII) chain   KO K16628   collagen type VII alpha Organism cata  Cygnus atratus (black swan) Pathway cata04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:cata00001]  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     118248224 (COL7A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen VWA fn3 VWA_2 Kunitz_BPTI Pur_ac_phosph_N Fn3_Dep-1_2nd DUF1194 YjeF_N Motif Other DBs NCBI-GeneID:  118248224 NCBI-ProteinID:  XP_050568761 LinkDB All DBs Position 10:complement(12414834..12442554) Genome browser AA seq 2617 aa AA seqDB search MSGRLLLLAVLLGPPAVVAQKRSQVVCEDVLEADIAFLVDGSSSIGRNNFRAVRAFMEDL VAPFVHAVGEKAVRFAVVQYSDEPRVEFTFSQHANGTGVRRAIQQLSYKGGNTRTGAGLR YISDNFFGPTHVRPGVPKICILITDGKSQDDAEQSAVKLKSQGIKVFAVGIKNADEKELV RVASVPTDFFFYYVGDFKLLGTLVPLMTRRVCTSSGGTLRTLDGPGHAGPSNLEILERGP DLLRIRWTPASGPVTGYRVQHVPLTGLGQPVVAERQEVSLGPRETSAVLRGLRVGTEYLV TVIAQYANSVGESVSGRARTPAVQHVAVHNVSAQSMLLAWQPVTGATGYRLSWAALTGQD RRKVELDARQTSHVLGGLQPSTDYVVTVAPLFGQLEGPAASVRQRTEASVEQTLRTNILG PTAIQVLWVALREARGYRLEWKRATGPEPPRTVSLPSSISSYQLTGLQPGTEYRITLYTL YDGGEVATPVTTFQTGVEVPVGAVTDLRLLEDMGRRVRLGWTGVPGATEYKVTVRNAQDG TERTRRVPGGQTVLELGDLREGVTYLVRVSALVGGREGGADTLNIRVKYPAVGSISELRV VEASPSQLQVTWRGLPGAGGYRLTWRASDGQEQSRFLPADPTTFTIEGLRAGTVYAIGVS ATIDGREGPPVTTTGRTAPEQVGTVSRLEVQSSRSNVARVTWVGVPGATAYRVVWSRRDG GSESSQRVPGHISSFDIPDLEGGVSYTVKVTALVGNREGNPVSIIVTTPPVPPISGFQVT EASEQRLRLAWVPVAGSTGYRLAWRPAEGGPQRSQQLPAASSSYDLGGLEPGRRYHVSIT SLVGGRESSPVTVTAVTAAPGRVTSLRVTDVRRDSVTLAWTPVPSASGYVLSWSPPAAGG EAQRALPGTASSQQVSGLRLGQRYTFTIRPLLGSVPGAETSVSERPVCRDARGDIVFLVH GTRDSSSGADTVRSLLSNTITALGRLGPDGTQVGLATYSYRSLPWLLLNRSSDLPAVLEQ IRTMRYEEPSGNAIGAAITFARTYLLSPGAGRRPGVPAVLVVLADGPSGDDAITAARDIK AAGVRVLAVGLEGADREQLRRMVTAEDPRFVFPNRGALQELEGELTDDLCTIISTRPEPE PKPCAVQCPKGDKGDPGEAGPRGLTGLPGLKGEKGEPGEPRVIVDGGQGLPGRKGEPGTP GNPGPPGSPGPRGPFGDPGPLGPTGPMGPPGPPGDFVKGEKGDRGERGLPGDPGPRGPAG TPGPKGEKGDGEDGLPGPPGRPGDPGDRGDRGAPGELGETGEKGDPGAPGEPGQPGDPGL SIPGPAGPKGEQGDRGIPGLAGRSGPKGDPGEPGEKGEPGQAGTPGQTGLRGKEGERGEK GDEGTPGEAGLPGKPGDRGPRGLPGYRGPPGEKGDLGDPGPEGRNGAPGAPGNKGDRGEP GPPGPPGRSVDAGLGGAGEKGEKGDPGDPGEDGAKGARGDTGPPGLPGERGIEGPRGPPG TRGDPGDRGLPGEKGERGPPGLDGRNGLEGKPGPPGPPGLRGDPGKQGDPGRDGLPGLRG EQGPPGAVGPLGPPGLPGKPGDDGKPGLNGKNGEDGTPGEDGRKGDKGDAGAPGRDGRSG AKGEQGDSGVPGPPGPPGLPGIPGQVGPPGQGRPGIRGDPGTAVNIERSLEALGIKVSSL KELTGAYDGSSDSFLPVSERLRGQKGSRGEPGERGPPGREGSLGFPGERGPKGDKGDQGA PGPQGPAGRAVGERGPEGPPGQPGEPGKPGIPGVPGRAGELGEAGRPGEKGDRGEKGDRG EQGRDGLPGPPGPPGPKVGDRCCWGPSPRGERGPPGPKGAKGEPGAEGERGPKGDKGEGG PRGERGEPGEKGRDGSPGLPGERGLAGPEGKPGPQGFRGPPGPPVSTPQPGTAQWHHAHP LGNFWGKRGRLEGLPGFPGVLGRPGNQGEPGPPGPPGLPGPQGSMGLPGPPGPPGLVGPQ GAPGLPGQVGESGKPGVPGRDGVSGKDGEPGMPGKMGVPGPSGPAGPKGEPGDAGAPGQA ITGPPGAKGEKVRSWGTWGAPTPQWAGVRRVLSLVSLQGEPALLEGVLLGEPGSKGARGL PGPKGEKGEPGGSGEPGDPGEDGAKGASGAKGEKGDIGLPGPPGPPGLAGIAGAPGQPGL RGDSGQPGVPGPPGERGTPGASGQKGDKGEDGRPGLAGDRGLTGLPGARGERGDKGDVGA MGPKGDKGDSIVVEGPAGVRGSKGEPGDRGLKGSEGDKGDKGEQGMPGEKGARGEQGEKG STGFPGARGPGGQKGQPGRDGIAGARGEKGDVGYLGMRGPKGDRGMKGACGLDGDKGEKG EPGLPGRSGLPGRKGEPGELGLSGVPGAPGKEGLMGPKGDRGFDGQQGAKGDQGEKGDRG APGVIGAPGPRGSDGVPGPPGPPGSIGPRGPEGMQGQKGERGPPGQAVMGARGVPGIPGE RGEQGSPGAEGLRGEKGEPGMTEEEIRAYVRQEMSQHCGQDRHVLMDTNDLEYDSTYADE EEEDYEAALEADSSEQPAADASPCGQPLDEGGCKRYTLRWYYSQRAAECRPFVYSGCGGN TNRFGSRQECELRCGQQTGAGAPRGGAGSAAGGRPEA NT seq 7854 nt NT seq  +upstreamnt  +downstreamnt atgagcggccggctcctgctcctcgccgtgctcctgggccccccggctgtcgtggcgcag aagaggagccaagtggtgtgcgaggacgtgctggaggccgacatcgccttcctggtggac ggctcgtccagcatcggcaggaacaacttccgcgccgtccgcgccttcatggaggacctg gtggcacccttcgtgcacgccgtgggcgagaaggcggtgcgcttcgccgtggtgcagtac agcgacgagccgcgggtggaattcaccttctcccagcacgccaacggcacaggtgtccgg agggccatccagcagctgagctacaagggtggcaacacacggaccggtgctggccttcgc tacatctctgacaacttcttcggtcccacacatgtccggcccggggtcccaaagatctgc atcctcatcacggatggcaagtcccaggatgatgctgagcagtcggccgtgaagctgaag agccagggcatcaaggtcttcgccgtggggatcaagaacgccgacgagaaggagctggtc cgtgtggcctcggtacccaccgacttcttcttctactacgtcggcgacttcaagctgctg ggcacgctggtgccgctgatgacgcgccgggtgtgcacgagctctgggggcaccctgcgc accctggacggaccaggccacgctggcccctccaacctggagatcctggagcgaggccct gaccttctgcgcatccgctggaccccggccagcggccccgtcaccggctacagggtgcag cacgtcccgctgacggggctggggcagcccgtcgtggccgagaggcaggaggtgagcctg ggcccccgggagaccagcgctgtgctgcgggggctgcgcgtggggacggagtacctggtc accgtcatcgcccagtacgccaacagcgtcggcgagtcagtttcaggccgggcgcgcacc ccggccgtgcagcacgtggccgtgcacaacgtgtcggcgcagagcatgctgctggcctgg cagcccgtcactggtgccaccggctaccgcctctcctgggctgccctcacagggcaggac cggcgcaaggtggagctggatgccaggcagacgtcgcacgtgctgggggggctgcagccc agtacggactacgtggtgacagtggccccgctcttcgggcagctggaggggcccgcggcc tccgtccggcagagaacagaggctagtgtggagcagacgctgcggaccaacatcctgggc cccacggccatccaggtgctctgggttgccctccgcgaggcccgcggctaccgcctggag tggaagagagccacaggaccggagccccccaggacggtgtcgctgcccagcagcatcagc agctaccagctgacggggctgcagccgggcaccgagtaccgcatcaccctctacacgctc tacgatggcggggaggtggccacccctgtcaccaccttccagacgggcgtggaggtgccc gtgggcgccgtgacggatctgcggctcctcgaggacatgggcaggagagtacggctgggc tggactggtgtccccggcgccactgagtacaaagtgacggtgcgcaacgcccaggatggc acggagaggacgaggcgtgtcccaggcggccagacggtgctggagctgggtgacctccgg gaaggtgtcacctacctggtgcgtgtctcagccctcgtgggtggccgggagggcggcgcc gacacgctcaacatccgtgtcaagtacccggcagtgggcagcatctctgagctgcgggtg gtggaggccagtcccagccagctgcaggtcacctggagggggctgccgggtgccgggggc taccggctgacgtggcgggccagtgatggccaggagcaatcccgcttcctccctgccgac cccaccaccttcaccatcgaggggctgcgagctgggaccgtctatgccatcggtgtctct gccaccatcgatggccgtgagggtccccctgtcaccaccacggggcggacagcgcccgag caggtggggacagtgtcccggctggaggtgcagtcgtccaggagcaacgttgcccgtgtc acctgggtcggcgtgccaggagccaccgcgtaccgcgtggtgtggagccgcagggacggg ggctcggagagcagccagcgggttcccggccacatcagctccttcgacatccccgacctg gagggaggcgtctcctacaccgtgaaggtcacggcgctcgttggcaaccgggagggcaat cccgtctccatcatcgtcaccacccccccggtgccccccatcagcggattccaggtgacg gaggcctcggagcagcgcctgcgcctggcctgggtgccggtggccggcagcaccgggtac cgcctggcctggcgcccggctgagggagggccccagcgcagccagcagctcccggctgca tccagctcctacgacctgggggggctggagcccggtcggcgctaccatgtcagcatcacc agcctggtgggcggccgggagagctcgcccgtcaccgtcactgccgtcaccgctgccccc ggccgtgtcaccagcctgcgggtgaccgacgtgcggagagactccgtaacgcttgcctgg actcccgtccctagtgcctctgggtacgtcctgtcctggagccctcctgcagccggcggc gaggcacagcgggcactgccaggcaccgccagctcccagcaggtctccgggctgcgcctg ggccagcgctacaccttcaccatccgcccgctcctcggcagcgtgccgggggctgagacc tccgtcagcgagcgcccagtctgcagggacgcccgaggtgacatcgtcttcctggtgcat ggcacccgtgacagctcctccggcgccgacaccgtgcgcagcctcctctccaacaccatc actgccctgggacgcctgggccccgatggcacccaggtgggcctggccacgtacagctac cgcagcctgccctggctgctcctcaaccgctccagcgacctgcccgccgtgctggagcag atccgcaccatgcgctacgaagagcccagcggcaatgccatcggagcagccatcaccttc gccaggacctacctgctgagccccggcgcggggcgccggcccggcgtgccggcggtgctg gtggtcctggccgacggcccctctggggacgatgccatcactgcggccagggacatcaag gctgcgggggtgcgggtgctggcggtgggcttggagggggcagaccgggagcagctgcgg cgcatggtgacggccgaggacccgcgcttcgtcttccccaaccgcggcgcgctgcaggag ctggagggagagctcaccgacgacctctgcactatcatctccaccaggccggagccggag ccaaagccctgcgccgtgcagtgccccaagggcgataaaggggaccctggtgaggcgggg ccgcggggactgacggggcttcctggcctgaagggggaaaaaggcgagccgggagagccc agggtgattgtggatggaggacagggtctgcccggacggaaaggggagccgggcacgccg ggcaaccctggcccccccggcagccctggcccccggggtccctttggagatccaggccct ctgggtcccacggggcccatggggccaccgggacctccgggagactttgtaaagggggag aaaggtgaccgaggggagaggggtctgcctggggaccccggtcctcggggacctgccggc acccctggacccaagggcgagaagggtgatggtgaggacggtttgccagggccacccggc cgcccaggggacccaggggaccggggagaccgcggggcgccaggcgagctgggagagacg ggcgagaagggtgatccaggagcgcccggcgagcccggccagccgggtgaccctggtctg agcatcccgggcccggccggccccaaaggcgagcagggcgatcggggcatccctggcctt gctggcaggagcggccccaagggggacccaggggagccgggcgagaagggcgagccgggc caagcgggcacaccagggcagacagggctgcgtggcaaggagggcgagcgtggagagaaa ggtgacgaaggcaccccgggcgaagcaggcctgcctggcaaacccggagacaggggtccg cgggggctgcccgggtaccgcggcccccccggggagaagggcgacctcggggacccgggt cccgaaggcagaaacggcgccccaggagcaccagggaacaagggtgaccgtggcgagccg gggcctcctggacctccgggacgatcagtggatgcggggctcggaggagcaggggagaag ggcgagaagggggaccccggggaccctggcgaggacggagcgaagggtgccaggggtgac accggcccccccggcctgccgggagagagaggcatcgagggcccccgcggcccccctggc acacggggtgaccctggggaccgaggcttgccaggagagaagggagagcgtggcccacca gggctggacggccgcaacgggctggaagggaaacctgggcccccaggtccccccgggctg aggggggacccagggaagcagggggaccccggccgggatgggctgccggggctgcgtggg gagcagggtccgcctggtgccgtgggacccctggggccgcccggcctccccggcaaaccc ggtgacgatggcaagcctggcctcaacggcaagaacggagaagacgggacaccaggagag gacgggaggaagggcgataaaggcgatgccggggcccctggcagagacggccgcagcggt gccaagggcgagcagggggacagcggcgtgcctgggccccccggcccccctggcctcccc ggcatccctgggcaggttggccccccaggccaggggcgacctggcatccgcggtgacccc gggactgcagtgaacatcgagcgtagcctggaagccctcggcatcaaggtctcatccctt aaggagctcacgggtgcctacgacgggagctcggactcatttctgcccgtgtccgaacgg ctgcgggggcagaagggcagccggggggagccaggagagaggggccccccgggacgggag ggctccttaggcttccccggtgagcgaggacccaaaggtgacaaaggggaccaaggtgcc cccggcccccagggtcctgcaggccgggctgtgggcgagcggggccccgaggggccgcct gggcagccgggggagcctggcaagccgggcatcccgggggtgccgggccgggccggggag ctgggggaggccgggcggcccggcgagaagggtgaccggggcgagaagggcgaccggggt gagcagggcagagatggcttgccaggccccccaggtcccccagggcccaaggtaggtgac agatgctgctggggaccctctccaagaggggagcgcggcccccccggacccaagggagca aagggtgagccgggtgccgagggcgagcgaggacccaaaggagataagggtgaaggcggg ccgcggggcgagcgaggagagcctggcgagaagggcagggatggctccccgggccttcca ggagagaggggtctggctggccccgaggggaagccgggcccgcagggctttagagggccc cccggccccccagtaagtaccccgcagccgggtactgcgcagtggcaccatgctcatccc ctggggaacttctggggcaagcggggccgcttggagggcttgccaggcttccccggcgtg ctgggacgcccgggcaaccagggagagccggggccaccaggacctccgggcttgcccggt ccccagggcagcatgggactgcctggcccccctggcccccccggcctcgtgggtccgcag ggtgcccccgggctgccaggacaagtgggggagagcggcaagccgggcgtgccgggccgg gacggcgtgtcggggaaggatggcgagccggggatgccagggaagatgggtgtgccggga ccttcgggccctgccggccccaaaggggagccaggggacgccggagccccggggcaggcc atcaccggcccccccggtgccaagggcgagaaggtaaggagctggggtacgtggggggcc cccaccccgcagtgggcaggggtccgcagggtgctgagcctcgtgtcgctgcagggcgag ccggcgctgctggagggagtgctgctgggcgagcccggatccaaaggtgcccggggcttg cccggccccaagggagagaagggggagcccggaggatccggagagccgggagaccccggg gaagacggagccaagggggcgtccggagccaagggagagaagggtgacatcggcctgcca ggacccccaggacccccgggcttagcgggtatcgctggggcaccgggacagccaggcctg agaggggacagcgggcagcctggcgtgccaggtcccccgggagagcggggcacacctggg gcctctggccagaagggtgacaagggtgaagacgggcgcccggggctggcaggcgatcgc gggctgacgggcttgcctggagcccgaggggagcgcggggacaagggagacgtcggggcc atggggcccaagggagacaagggcgatagcatcgtggtggaggggcccgctggggtgcgg ggcagcaagggggagccgggagaccgtggcctgaagggctcagaaggggacaagggggac aagggcgagcagggcatgcccggagagaagggggcgaggggcgagcagggcgagaagggc tccacgggcttccccggggcacgcggccccggcgggcagaagggccagcctggccgggat ggcatcgctggagcccggggagagaaaggggacgtggggtacctgggcatgcgtggcccc aagggtgaccgcggcatgaaaggcgcctgcggccttgacggggacaagggcgagaaggga gagccggggctgccggggcgctcgggactgccggggaggaaaggcgagccgggagagctg gggctgtcaggagtgccgggggcccccgggaaggagggactcatgggacccaagggcgac cggggattcgacgggcagcagggagccaaaggagaccagggggagaaaggagaccggggt gctccaggtgttattggtgcccccggcccccggggcagtgacggggttcctggcccccct ggccccccaggcagcattggcccgcgaggacctgagggcatgcagggccagaagggggag agaggccccccggggcaggcggtgatgggggctcgcggcgtgcccggcatccccggcgag cgaggagagcagggcagtcctggtgctgaggggctccgcggggagaagggggagccgggc atgacggaggaggagatccgggcctacgtcaggcaggagatgagccagcactgcgggcag gacaggcacgtcctcatggacaccaacgacctggagtacgacagcacctacgcggatgaa gaggaggaggactacgaggcagccctggaggcagacagctcggagcagcctgccgctgac gcctcgccctgcgggcagcccctggacgaggggggctgcaagcgctacacgctgcgctgg tactacagccaaagagccgccgagtgccggcccttcgtctacagcggctgcgggggcaac accaaccgcttcggcagccgccaggagtgcgagctgcgctgcgggcagcagacgggggca ggtgccccccggggcggtgccggcagcgctgcgggcgggcggccggaggcgtag

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