Cygnus atratus (black swan): 118248290
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Entry
118248290 CDS
T09349
Symbol
DCAF1
Name
(RefSeq) DDB1- and CUL4-associated factor 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cata01001
]
118248290 (DCAF1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cata04121
]
118248290 (DCAF1)
Enzymes [BR:
cata01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
118248290 (DCAF1)
Protein kinases [BR:
cata01001
]
Serine/threonine kinases: Other
Other
118248290 (DCAF1)
Ubiquitin system [BR:
cata04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
118248290 (DCAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
EIF3I
WDR55
ANAPC4_WD40
LisH
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
118248290
NCBI-ProteinID:
XP_035402963
LinkDB
All DBs
Position
10:13380794..13434199
Genome browser
AA seq
1505 aa
AA seq
DB search
MTSGSGHVDSKAELTTLLEQWEKEHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDR
HPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWAREADQPLRTYATGLLGGAMENQDIAANYRDENSQLVALVLRRLR
ELQVTEMTTKQENKRPSPRKVPSDPLLPLDEEAVDMDYGEMAVDGEQEEVAGDMEISFHL
DSSHKTSSRVNSATKLDDGGLRKSKSGKQHERDGFRKAKQKLGFSASEPERMFVELSNSS
WSEMSPWVIGTNYTLYPLTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMYYIDLK
RTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYN
QDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRHDGL
RRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRRYFEAHLAIKLEQVKQSL
QRTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLMLQL
ISIACNWKTYYARNDTVRYALDVLAILTVVPKIQLQLAEPVDVLDEAGSTVSTVGISIIL
GVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQAPKSSEHTLA
KMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSS
CQIQQLMKEPVLQDKRSEHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRI
TFPEKELLLLIRNHLISKGLGETASVLTKEADLPMTAASHSSAFTPVAAAASPVALPRTP
RIANGISARLSSHTSVGSPATSVHAQARPSASQGPLALPGPSYASNSPLIGRISFVRERP
SPCNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKNPVA
TCPPFSLFTPHQCPEPKQRRQAPTNFTSRLTRRAAFPKYGGVDGGCFDRHLIFSRFRPIS
VFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITHLEPS
RDGSLLLTSATWSQPLSALWGMKSVFDMKHSFPDDHYVEFSKHSQDRVIGTKGDIAHIYD
IQTGNKLLTLFNPDLANNYKKNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMTISG
VFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRVVFNYTGTVMYGAMLQADDEDDLLEE
RMRSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDSKDCYLAVIENQGSMDTMNMDTVC
RLYEVGRQRLAEDEEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDENN
ENAGEDGENDFSPSDDEELANLLEEGDEGEDEDSDADEEVELILGDTDSSDNSDLEDDII
LTLNE
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaggatctggtcatgtggactccaaggctgagctcactactttgctggagcaa
tgggagaaagaacacggcagtgggcaagacatggtccctattcttaccaggatgtccgag
ctgattgagaaggagactgaagagtaccgcaaaggggacccagacccatttgatgaccga
cacccgggtcgagcagaccctgagtgcatgttaggtcacttactaaggatacttttcaag
aatgatgatttcatgaatgcgctagtgaatgcttatgtgatgacaagcagagaacctccg
ttaaacactgctgcctgtcggcttcttctggatatcatgccaggactggaaactgctgtc
gtctttcaggaaaaggaaggcatagttgaaaatctctttaagtgggcgcgagaggctgat
cagccactaaggacctacgcaacagggctattaggaggagctatggaaaaccaggatatt
gctgcgaattacagggatgaaaattcacaattggtagctttggtgcttcgacggctacga
gagctacaggttactgaaatgactacaaaacaagaaaacaagcgtcccagtcctcggaaa
gtgccgtcagatcctctgctgcctctagatgaagaggctgtggatatggattatggggag
atggcagtagatggagagcaagaagaagtggctggggatatggagatctcctttcatctt
gattcaagtcacaagaccagtagcagagtcaactctgctacaaagctagacgatggggga
ctgagaaaaagcaaatcagggaaacagcacgaaagagacggcttccggaaggccaagcaa
aagctgggcttctccgcttcagaaccagaacggatgtttgttgaactgtccaacagcagc
tggtcagaaatgtccccgtgggtgattggcactaactatacactttaccctttgaccccc
gccatagagcagaggctaattcttcaatacctgactcccttaggggagtaccaagagcta
ctacccatctttatgcaactgggatcaagggagctgatgatgtactacattgacttgaag
cgaaccaatgatgtgctgctcacttttgaagcccttaagcatttggcatcattgctgctg
cacaacaagtttgcgacggagtttgttgctcatggaggagtccaaaagttgctggagatt
cctcgtccttccatggcagccacaggagtctccatgtgcttatattatttgtcttacaac
caagatgccatggaaagggtgtgcatgcacccccataacgtgctctcagatgtggtgaac
tacaccttatggctaatggagtgctcccacgcctcaggctgctgccatgctaccatgttc
ttctccatttgcttttcattccgtgctgtcctggagctctttgacaggcatgatggactt
cgtcgtcttgttaacctgataagtactcttgaaatcttaaacctggaagaccaaggagct
ctgttgagtgatgatgagatctttgccagtcgccagactgggaaacatacctgcatggcc
ttgcgtcggtactttgaggctcaccttgctatcaagcttgaacaggtgaagcagtcactc
cagcgcactgaaggtggcattctggtacatccacagcccccctacaaggcctgttcctat
actcatgagcagattgtagagatgatggagttcttgattgagtatggtccagcacagctc
tactgggagccagcagaggtttttctcaagttgtcttgcgtccagctcatgcttcagctc
atttcaatagcatgcaactggaagacatactatgcaaggaatgacactgtacgctatgct
ttggatgtactagccatcctgacggtggttcctaaaatccagctgcagctggcagaacct
gtggatgtgttagatgaggctggatctactgtttccaccgtgggtattagtatcatcctt
ggagttgccgagggtgaatttttcatccacgatgccgagattcagaaatcagcccttcag
atcatcatcaattgtgtatgtggcccagacaaccggatctccagtattggcaaattcatc
tccggaactcctcggcgaaagcttcctcaggcccccaagagcagtgagcacacattagct
aagatgtggaatgtggtacagtccaacaatggcatcaaagtgctgctgtcattgctgtct
ataaagatgccgatcacagacgcagatcagatccgagcgttagcctgcaaagccttggtg
gggctctcacgcagcagtactgtccggcagattatcagcaagctccccctcttcagcagc
tgtcaaattcagcagctgatgaaagagccggtgcttcaggacaagcgcagcgagcatgtg
aagttctgcaaatatgctgctgagctgatagagcgtgtctcggggaagcccttgctgatt
ggcacagatgtctccctggctcggttgcagaaagcggatgtggtggcccagtcaaggatc
acgtttcctgagaaggagctgctgctcctgattcggaaccatctcatctctaagggccta
ggagaaactgcatctgtccttactaaagaggctgacctacccatgactgcagcatctcat
tcatctgccttcacccctgttgcggctgctgcctctcctgtggccctgcctcgcactcct
cgcatagctaatggcatctcagcccggttgagtagccacacttctgtaggttcccctgcc
acctccgtccatgctcaggcaaggccgtctgcatcccaaggtccacttgcccttccaggc
ccttcttatgccagcaactctcctctgattggcaggattagctttgtcagggagagacca
tctccctgcaacggcagaaaaatcagagtgttgcgacaaaaatcggaccatggcgcctac
agccagagcccagctatcaaaaagcagctggacagacaccttccttccccacccacgctg
gacagtataatcacagagtaccttagggagcagcatgcccgctgcaagaaccctgttgcc
acctgtccccctttctctctctttactccccaccagtgtcctgagccaaaacagaggcgc
caagcgccaactaactttacctcacggctgacccgcagggcagcctttccgaagtacgga
ggggtggatggtggctgctttgatagacaccttatatttagcaggttccgtccaatttct
gtgttccgggaagcaaatgaggatgagagtggctttacctgttgcgcgttttctgcacgg
gaacgattcttaatgttgggtacttgcacagggcagttgaaactctacaatgtatttagt
ggacaggaagaggctagttacaactgccataactctgctatcacgcaccttgagccatcc
agggatggatctttattgctgacatctgctacatggagccaacctctgtctgcgttgtgg
ggaatgaagtctgtctttgatatgaagcattccttccctgatgaccactacgtggagttc
agcaagcactctcaggatagggtcattggcacaaaaggagacatcgcccatatctatgat
attcagactggcaacaagctattgactctgtttaacccagatcttgccaacaactacaag
aagaactgtgccacgtttaaccccacagatgaccttgtcctaaatgatggtgtcctctgg
gatgtcagatcagcacaagccatccacaagtttgataaattcaacatgaccatcagtggt
gttttccatcccaatgggctagaggtcatagtcaacacagaaatttgggacctccgaact
ttccacttgttacacacggtacctgctctggatcagtgtcgtgtggtcttcaactacact
ggtacagttatgtatggagctatgttgcaggcagatgatgaagatgaccttttggaggag
agaatgagaagtccctttggctcttctttcaggacattcaatgcgaccgattataaacct
atagctaccatagatgtaaagcggaatatctttgatttgtgcacagacagcaaagactgc
tatctggctgtcattgagaatcaagggagcatggataccatgaacatggatacagtttgc
agactgtatgaagtgggcaggcagcgtttggcagaagacgaagaggatgaagaagaagat
caggaggaagaagagcaagaggaagaagatgatgacgaagatgatgatgatacagatgac
cttgatgagttggacacagaccagctgctggaggctgagctggaggaggatgagaacaat
gagaatgctggtgaggatggagaaaatgacttttctccctctgatgatgaggagcttgcc
aacctcctggaagaaggtgatgagggtgaagatgaagactctgatgctgatgaggaagtt
gagctgattcttggagatactgacagctcagataactctgacttggaggacgacataatc
ttgactctgaacgagtga
DBGET
integrated database retrieval system
