Cygnus atratus (black swan): 118248441
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Entry
118248441 CDS
T09349
Symbol
SMYD1
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1 isoform X2
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata00310
Lysine degradation
cata01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
118248441 (SMYD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cata03036
]
118248441 (SMYD1)
Enzymes [BR:
cata01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
118248441 (SMYD1)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
118248441 (SMYD1)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
118248441 (SMYD1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-MYND
SET
TPR_12
pulA_all-beta
Motif
Other DBs
NCBI-GeneID:
118248441
NCBI-ProteinID:
XP_035403295
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All DBs
Position
4:71797539..71820510
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AA seq
491 aa
AA seq
DB search
MTKGGMESVEVFTSEGKGRGLKAQKEFLPGDVIFAEPAYAAVVFDSLTHIICHTCFKRQE
RLHRCGQCKFAYYCDRTCQRAAWLNHKNECSAIKRHGKAPTENIRLAARIMWKMEREGSG
LSEGCLVSIDDLQNHVENFGEEEKKDLHVDVESFLEFWPPQSQQFGMQYISHIFGVINCN
AFTLSDQRGLQAVGVGIFPNLCQANHDCWPNCTVIFNNGNHEAVRSMFHTQMRIELRALS
KISPGDELTVSYVDFLNVSEERRRQLKKQYYFDCTCEHCKKQIKDDLMLAVKEGDHKPSA
ETVKEVIQFSKDTLEKINKARLEGLYHEVVKLCRDCLKKQEPVLGDTNLYLLRILSIASE
VLSYLQMFEEAADYAKRMVDGYMKIYHPNNAQLGMAVMRAGVTHWHAGLIEAGHGMICKA
YAILLITHGPSHPITKDLEVMRVQTEMELRMFHQNEFMYYKMREAALKNQKIQVMPEPSN
ETTPSLFHKKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagggggaatggagtcagtcgaagtgttcacgtctgaaggcaaaggcaggggc
ttgaaagcgcagaaggaattcctgcccggggatgtcatctttgcggagccagcctacgct
gccgtggtttttgatagcctgacacacatcatctgccacacctgcttcaaacgccaggag
aggctccaccgctgcggccagtgcaagttcgcctactactgcgaccggacctgccagagg
gccgcctggctgaaccacaaaaatgagtgctccgccatcaagaggcacggcaaggcaccc
accgaaaacatcaggctggcggctcgcatcatgtggaagatggagagggaaggcagcggg
ctgtcggagggctgcctggtctccatcgatgacctgcagaaccacgtggaaaacttcggc
gaggaggagaagaaagacctccatgtcgacgtggagagcttcctggagttttggccgccc
cagagccagcagttcggcatgcagtacatctcccacatattcggagtgatcaactgcaac
gccttcaccctcagcgaccaaagaggactgcaagctgttggtgtgggaatcttccccaac
ctctgccaagccaaccacgactgctggcccaactgtaccgtcatcttcaacaatggcaat
catgaggctgtaagatcgatgttccacacacagatgaggatcgagctgcgggcactgagc
aagatctccccgggggatgagctgaccgtgtcctacgtggatttcctcaacgtgagcgag
gagcggcggaggcagctgaagaagcagtattacttcgactgcacctgcgagcactgcaag
aaacagatcaaggacgacctgatgctggcggtgaaggagggggaccataagccctctgca
gagacggtgaaggaggttatccagttctccaaggacacactggagaagatcaacaaggcc
cgcctggagggactttaccacgaagttgtgaaattgtgccgtgactgcctgaagaaacag
gagcctgtgctgggggacacgaacctctacctcctgaggatcctcagcatcgcctccgag
gtgctctcctacctccagatgtttgaggaagcagctgactatgccaagaggatggtggac
ggctacatgaaaatataccatcccaacaacgcgcagctggggatggctgtgatgcgggca
ggagtgacccactggcatgctggcctcattgaagccggccatggcatgatctgtaaagcc
tacgccatcctcctgataacccatggaccttcccaccctattaccaaggatctggaggtc
atgcgtgtccagacggagatggagctgcgcatgttccatcagaatgagttcatgtactac
aagatgagggaagctgccctcaaaaaccaaaagattcaagtcatgcctgaacccagcaat
gagaccacacccagcctcttccacaagaaggaatag
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