Cygnus atratus (black swan): 118248509
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Entry
118248509 CDS
T09349
Symbol
DHX15
Name
(RefSeq) ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118248509 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cata03041
]
118248509 (DHX15)
03009 Ribosome biogenesis [BR:
cata03009
]
118248509 (DHX15)
Enzymes [BR:
cata01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118248509 (DHX15)
Spliceosome [BR:
cata03041
]
Complex A
U2 snRNP components
U2 related factors
118248509 (DHX15)
Complex B
118248509 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
118248509 (DHX15)
Ribosome biogenesis [BR:
cata03009
]
Eukaryotic type
90S particles
Helicases
118248509 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
Atrophin-1
SRP54
nSTAND3
Flavi_DEAD
AAA_25
AAA_29
Apis_Csd
Motif
Other DBs
NCBI-GeneID:
118248509
NCBI-ProteinID:
XP_035403424
EnsemblRapid:
ENSACYG00000010144
LinkDB
All DBs
Position
4:58798694..58845596
Genome browser
AA seq
762 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRSDGKDRDRDRDRDDRKDRDRDRDRDRDRDREREKEKELRAA
SNSTLIAAGLPPMKPAMIPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDILIRH
QSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVML
GQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILM
GVLKEVVRQRADLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLE
AAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLP
PQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRV
ESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQ
LKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAK
MVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHA
FKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKAL
VTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDI
KPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgccaccgcctagaccttggggacgattacagctccagcaaaaagcgctcc
gacgggaaagatcgtgatcgggacagagaccgtgatgaccggaaagatcgtgacagggat
cgtgacagagatagagatcgtgacagagaaagggagaaggaaaaggaattgcgagcggca
tctaactctacgctcattgctgctgggttaccacctatgaaaccagcaatgattccacac
agtattaaccctttcacaaatcttccacatacacctcgttactatgacatcctgaaaaaa
cggctacagcttcctgtctgggaatataaagaaagatttacagatattttgattaggcat
cagtcatttgtactggttggagagactgggtctggtaaaacaacacagatccctcagtgg
tgtgttgactacatgcgctcgttacctggaccaaagaggggagtagcatgtacccagcct
aggagagtggccgcaatgagcgtggcgcagcgggtcgctgatgagatggatgtaatgctg
ggccaggaagttggttactctattcgatttgaagactgtagtagtgcaaaaaccattctg
aagtatatgactgatggtatgttacttcgtgaagcgatgaatgatcctttgctggagcgc
tatggtgttataattcttgacgaggctcacgagagaaccctggctactgatattttgatg
ggagttttgaaagaagttgtaagacaaagagctgatttaaaggttatagttatgagtgct
actttagatgctggcaagtttcagatctactttgataactgtcctcttctaaccatcccg
ggtcgcacccatcctgtggagatattctatactccagaaccagaaagggattaccttgag
gctgccattcgaacagtgatccaaattcacatgtgtgaagaagaggaaggagatcttcta
ctctttcttaccggacaagaggagatcgatgaagcctgcaagaggataaaacgtgaaatt
gatgatttaggccctgaagtgggtgacatcaaaatcattccattgtactccacccttcct
ccgcagcaacagcaaaggatttttgaacctcctccaccaaaaaaacaaaatggagcaata
ggaagaaaggttgttgtatccaccaacattgctgagacatcattaacaatagatggtgtg
gtgtttgtgattgatcctggctttgcaaaacaaaaggtgtacaatcctcgtatcagagtg
gagtctctcttggtgactgcgattagtaaagcttcagctcagcagagagctggccgtgct
ggtcgtactagaccaggcaagtgcttcaggctttatacagagaaggcttacaaaactgaa
atgcaggacaatacataccctgaaattttgaggtctaacttaggatctgtagtattgcag
ctcaagaagcttggtatagatgatttggtgcacttcgattttatggatcctccagctcct
gaaactctgatgagagccttagagcttttgaattatctggctgctttaaatgatgatgga
gacttgactgaattgggatccatgatggctgaatttccactggacccacagctggctaaa
atggttattgcaagttgtgactacaactgctctaatgaggtcctatctattactgccatg
ttgtcagtcccacagtgttttgttcgccccacggaagcaaagaaagcagcagatgaagcc
aagatgaggtttgcccacatagatggagatcatttgacgttgctgaatgtctaccatgct
ttcaaacaaaatcatgagtcggttcagtggtgttatgacaacttcattaactacaggtcc
ctgatgtctgcagacaatgtacgccaacagctgtcacgaatcatggatagatttaatttg
cctcgtagaagcacagactttaccagccgagattattacatcaatataagaaaggcatta
gttactgggtatttcatgcaggtggcgcacttggaacgaacagggcattacttaacagtg
aaagataaccaagtggtgcagctgcatccttccactgtccttgatcataaaccagagtgg
gtgctttataatgagtttgtccttacaacaaagaactacatccggacatgtacagacatc
aagccggagtggctggtgaaaattgcccctcaatattatgacatgagcaattttccacag
tgtgaagcaaagagacagttggatcgcatcattgccaaacttcagtccaaggaatactca
cagtactga
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