Cygnus atratus (black swan): 118248527
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Entry
118248527 CDS
T09349
Symbol
SORCS3
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cata04131
]
118248527 (SORCS3)
Membrane trafficking [BR:
cata04131
]
Endocytosis
Others
Others
118248527 (SORCS3)
Endosome - Lysosome transport
118248527 (SORCS3)
Endosome - Golgi transport
118248527 (SORCS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
118248527
NCBI-ProteinID:
XP_035403438
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All DBs
Position
7:complement(12276993..12556837)
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AA seq
1146 aa
AA seq
DB search
MEKGTRRSPPCHAALLAWTWLLLLSCSRTGAEITCGPCSSPSRPRLGLEQRQAAGGRGPA
VRSRRAAAGGGRGLPLAEGQRGARAQPRGPPEEGRAARLRGAEELRLGSTTFALTGDAAH
NQAMVHWSGHNSSVILILTKLYDFNLGSVTESSLWRSTDYGTTYEKLNDKVGLKTVLSYL
YVSPTNKRKIMLLSDPEIESSILISSDEGATYQKYRLNFYIQSLLFHPKQEEWILAYSLD
QKLYSSLDFGRKWQLMHERVTPNRFYWSVAGLDKEPDLVHMEARTADGHTHYLTCRIQEC
SETKRTGPFSRSIDISSLVVQDEYIFIQVTTGGRANYYVSYRREPFAQIKLPKYSLPKDM
HIISTVENQVFAAVQEWNQNDTYNLYISDTRGVYFTLALENVKSSRGLEGNIIIDLYEVA
GIKGIFLANKKIDDQIKTFITYNKGRDWRLLQAPATSLRGDPVVCQLPFCSLHLHLQLSE
NPYTSGSISSKETAPGLLVATGNIGPELSYTDIGMFISSDGGNSWRQIFEEEYNVWFLDW
GGALVALKQTSVPIRHLWVSFDEGRSWSKYGFTSTPLFVDGSLVDSGIETQIMTVFGHFS
LRSEWQLVKVDYKSIFSRRCNKDDYQTWHLHNQGEPCVMGERKIYKKRKPGAQCSLGRDY
SRTVVSEPCVCGQGDFECDYGYERHSNNQCVPAFWFSPSSLSKDCSIGQSYLNSTGYRRI
VSNNCTDGLREKYMAKVEKCPGKAPQGLHILTADGKLVTEQGQNATFIILMEEGDLQRTN
IQLDFGDGIAVSYANFSPVEDGIRHVYKSAGIFQVTAYAENSLGSDTAVLFLHVVCPVEH
VHLNVPFVAIRNKDVNITAVVWPSKAGTLTYFWWFGNNTKPLITLESSISYVFAVEGMNT
VTVQVAAGNTLIQDTKEIAVHEYFQSQLLSFSPNLDYHNPDIPEWRQDIGKVIRRALAQV
TGIPDEQILVAVFPGLPTSAELFILPRKNTTEMRKSSEADLEQVVEILFNALNQNLVQFE
LKPGVEVIVYVTQLTLAPLVDSSTGHSSSAMLMLLSVVFVGLAVFLIYKFKRKIPWINIY
AQVQHDKEQEMIGSVSQSENAPKITLSEFTDPEELMDKELDTRVMGSISTIANSESTKEI
PNCTSV
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggggacccgccgctctccgccctgccacgccgccctgctcgcctggacatgg
ctcttacttctctcctgctcccgcaccggcgccgagataacttgcggcccctgctcgtct
ccctcccggcctcgcctcgggctggagcagcggcaagcggccgggggccggggcccggcg
gtgcggagccggcgggcggcggcgggaggcggccgggggctgcccttggccgaggggcag
cgcggagccagggctcagccccgcggacccccggaggaggggagagcggcgaggctgcga
ggggcagaggagctgcggctgggcagcaccaccttcgccctcaccggggacgcggcgcac
aaccaagccatggtgcactggtccggccacaacagcagcgtgattctcattctgacaaag
ctctacgacttcaacttggggagcgttaccgagagctcgctgtggaggtcaacagactat
ggcactacctatgaaaagctaaatgacaaagtaggcctgaagactgtgctgagctacctt
tatgtcagtcccactaacaagaggaagatcatgcttcttagtgatccagagattgagagc
agcattctcatcagctctgatgaaggggctacgtaccagaagtaccgtctgaacttctat
atccagagtctgctcttccaccccaagcaggaggagtggatcttggcctatagtctggat
caaaagctgtacagctccttggacttcggaagaaaatggcaactcatgcacgagcgggtc
actccaaacaggttttactggtcagtggcgggtttggataaagaaccagaccttgtacac
atggaagcccggacagctgatggacacacccactatttgacctgtcggatccaggagtgc
tcagagaccaaaaggactgggccattttcacgctccattgacatcagctcccttgttgtt
caggatgaatatatcttcatccaggtgacaactggtggaagagcaaattactatgtgtca
tacagacgggagccttttgcgcagatcaaattgcccaaatactctcttcctaaggacatg
catattatcagcacagttgagaatcaggtgtttgcagctgttcaagagtggaaccagaac
gatacatacaacctgtatatctcagacacccgaggggtttacttcaccctggccttggaa
aatgtgaaaagcagtagaggactggaagggaatatcatcatcgacctttatgaggtagca
gggatcaaaggcatattcctggctaacaaaaagatagatgaccaaatcaagactttcatt
acctacaacaagggcagagactggcgtttgctgcaggcaccggccaccagtctaagaggg
gatcctgtggtttgccagctgcccttttgctcgttgcacttacacctgcagctctcagag
aatccatatacttcaggaagcatttccagcaaggagacagcccctgggctgctggtggca
acaggtaatattggccctgagctttcctacactgatattggcatgttcatctcttctgac
ggtgggaattcctggagacagatcttcgaggaggaatacaacgtgtggtttctggactgg
ggaggggcactagtggccctgaaacaaacgtcagtgcccatcaggcacttgtgggtgagt
tttgatgagggaagatcttggagtaaatatggcttcacatcaacaccgctttttgtggat
ggatcccttgtagattctggcatagagacccagataatgacagtttttggacacttcagt
ctccgttctgaatggcagctggtcaaagtggactacaagtctattttcagccggaggtgt
aacaaagatgactaccaaacctggcatttgcacaatcagggggaaccttgtgtcatggga
gagaggaagatctataaaaaacgcaagcccggagcccagtgttccctaggtcgggactat
tcccgaacagtggtatctgaaccgtgtgtctgtggtcaaggagactttgagtgtgactat
ggctatgagaggcacagcaacaatcagtgtgtcccagccttctggttcagcccatcttcc
ctgtccaaggattgcagtattggtcaaagctacttgaacagcactgggtaccgaaggatt
gtgtctaacaactgcacagatggcttgcgagagaagtatatggccaaggtggagaaatgc
cctggaaaagcacctcaaggactgcacatcctcaccgctgatggaaagttggtcacagag
caggggcagaatgccaccttcatcatccttatggaagagggtgatctccagaggacaaac
attcaacttgattttggagatggcattgcagtatcctatgcaaatttcagccctgttgag
gatggcatccggcatgtgtataagagcgctggaatctttcaggtgacagcctatgcagaa
aacagcctgggctctgatactgctgtcctcttcctgcatgtggtctgtccggtggagcac
gtccatctgaatgtcccttttgttgccatcaggaataaggatgtcaacattaccgcagta
gtttggcccagtaaagcaggcacacttacctacttctggtggtttggtaacaacaccaag
cccctcatcaccttggaaagcagcatctcctacgtcttcgctgtggaggggatgaacaca
gtcactgtgcaggttgctgcgggcaacaccctcatccaagacaccaaggagatcgcagtg
cacgaatatttccagtctcaactcctgtcattttctcctaacttggactaccacaaccct
gacattcctgaatggagacaagacattggcaaagtcatcagaagagctctagcacaggtg
actggtatccctgatgaacagatcttggtagctgtatttcctgggctgcctacttctgct
gaactcttcatactgccccgtaaaaatacaacagagatgaggaaaagcagtgaggccgat
ctagagcaggttgttgaaatcctttttaatgctctcaaccaaaacctggtccagtttgaa
ctgaagcctggcgttgaagtcattgtgtatgtcactcagttaacattagcaccccttgtt
gattccagcacgggtcacagtagttcggcgatgctgatgttgttgtctgtggtgtttgta
ggcttggctgtttttttaatctacaaattcaagaggaaaatcccttggattaatatctat
gcccaagttcagcatgacaaggagcaagaaatgattggctctgtcagccaaagtgaaaat
gcccccaaaatcactctgagtgagttcacagaccccgaggagctgatggacaaagagctg
gacacgcgagtgatgggaagcatctcaacaattgccaacagtgaaagcacaaaggaaatc
cccaactgcactagtgtttaa
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