Cygnus atratus (black swan): 118248540
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Entry
118248540 CDS
T09349
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04110
Cell cycle
cata04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
118248540 (SMC3)
04114 Oocyte meiosis
118248540 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cata03036
]
118248540 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cata00535
]
118248540 (SMC3)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
118248540 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
118248540 (SMC3)
Proteoglycans [BR:
cata00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
118248540 (SMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
OmpH
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
118248540
NCBI-ProteinID:
XP_035403452
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All DBs
Position
7:complement(10837998..10862386)
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AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEEIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYSKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVLNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSDDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSTESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAEHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagcaggtaatcattcaaggctttcgaagctacagggaccaaaccattgtg
gatccattcagctcaaaacataatgtcattgtgggaagaaatggatctggaaaaagcaac
ttcttttatgcaattcagtttgtcctcagtgatgagttcagtcatcttcgcccagagcag
agattggctttgttgcatgaaggtacgggccctcgtgttatttcagcttttgtggaaatt
atatttgacaattcggacaacagattgccgattgataaagaggaagtctcacttcgcaga
gtcattggagccaagaaggaccaatatttcttagacaagaaaatggtgacgaaaaatgat
gtaatgaatcttctggaaagtgctggattttctcgcagtaacccatactatattgtcaaa
caaggaaagatcaaccagatggccacagctcctgactctcagagactgaaattactaaga
gaagtagctggtaccagagtgtacgatgaacgtaaagaagagagtatttcactaatgaaa
gaaacagagggtaagcgagagaagatcaatgagttgttgaaatacattgaagaacgactt
catacccttgaagaggagaaagaagagctggctcagtaccagaaatgggataaaatgagg
agagcgttagaatatacaatttataatcaggagcttaatgaaaccagagctaagctcgat
gagctctctgccaagagagagacaagtggagagaagtccaggcagctgagagatgcacag
caagatgctagagataaaatggaggaaatagaacggcaagttcgtgagctgaagacaaag
atttctgcaatgaaagaagagaaagaacaacttagtgctgaaagacaggagcagattaaa
cagaggactaaactagagcttaaggccaaagacctgcaggacgaattagctggcaacagt
gaacaaaggaaaagactgttaaaagagaggcaaaagcttcttgagaaaattgaggagaaa
cagaaagaattagcagaaacggagccaaaattcaacagtgtaaaagaaaaagaagagaga
ggaattgctagacttgcacaggctacgcaggaaagaacagatctttatgcaaaacaaggt
cggggaagccagttcacatccaaagaagaaagggataagtggataaagaaagaactgaag
tctctagatcaagccatcaatgacaagaagcggcagattgcagctatacacaaggatttg
gaggatacagaggcaaataaggagaaaaatttggaacagtacagtaaactggaccaggat
cttaatgaagtgaaggctcgtgttgaagaactggacagaaagtactatgaagtgaaaaat
aaaaaggatgaactacagagcgaaagaaattatctatggagagaggagaacgcagagcaa
caagctcttgctgcgaagcgggaggacttagaaaagaaacagcagcttctcagagcagca
acaggaaaggccattttgaatggtatagacagcataaacaaggttttggagcacttccgt
cgaaaaggcataaaccagcatgttctaaatggctatcatggcattgtgatgaacaacttt
gaatgtgaaccagctttctacacttgtgttgaagttactgcggggaacaggttattttat
cacatcgtggattctgatgaagtcagtacaaaaatcttaatggaatttaacaaaatgaac
cttcctggagaagttactttcctccctttgaacaagctggatgttcgagatactgcttat
cctgagactaatgatgccattcctatgatcagtaaactgagatacaatccaagatttgac
aaagctttcaaacatgtatttggaaagactctaatttgccgtagcatggaagtatctacc
cagctggccagagctttcaccatggactgtattactctggaaggtgatcaagtcagccat
cgtggtgctttgactggaggttattatgacacaagaaagtctcggctagaattgcaaaaa
gatgttagaaaggcagaagaagaacttggtgaacttgaagcaaaactcaatgaaaacttg
cgcagaaacattgaaaggattaataatgaaattgaccagctaatgaaccaaatgcagcaa
attgagacgcagcagagaaagttcaaagcctctcgagacagtattttatcagaaatgaaa
atgttgaaggagaagaggcagcagtctgaaaagacatttatgcctaagcaacgcagctta
cagagcttggaggcaagtttacatgctatggaatcaactagagaatcgctaaaagcagaa
ctggggaccgatttgttgtctcaactcagtcttgaagatcagaaacgtgtggatgctctt
aatgatgaaattcggcaactacagcaagaaaacagacagcttttgaatgagaggattaaa
ctagaaggcattatcacaagagttgaaacatacctcaatgaaaatctgagaaaacgctta
gatcaagtggaacaagaactgaatgaactacgagaaacagaaggtggcacagttcttaca
gccacaacatcagaacttgaggctatcaacaaaagagtgaaagatactatggcacggtca
gatgatctggataattccattgacaaaacagaagcaggaattaaagagctgcagaagagc
atggagcgctggaagaacatggaaaaggagcatatggatgccattaaccatgacacaaaa
gaacttgaaaaaatgactaacaggcaagggatgctcctcaagaagaaggaagaatgcatg
aagaaaatccgagaactgggttctcttccacaggaggcttttgaaaagtatcagacacta
agtttaaagcagttattccgcaagctggagcagtgcaatacagaactgaagaagtacagt
catgttaataaaaaagctttagaccagtttgtaaatttctcagagcagaaggaaaaactg
ataaaaagacaagaggaactggataggggctacaaatccatcatggagctgatgaatgtg
cttgagcttaggaaatatgaggctattcagctgactttcaaacaggtgtcaaaaaatttc
agtgaagtattccagaagttagtccctggtggcaaggccacattagtgatgaagaaagga
gatgtggaaggcagtcagtcccaggatgaaggcgaaggcagtacggagagtgaaagggga
tctggatcacagagcagtgttccatctgtagaccagttcactggagttggcataagggta
tcattcacagggaagcagggtgaaatgagagaaatgcagcaactttcaggtggacagaaa
tccctagtagctctagccctgatatttgctatccagaaatgtgatccagccccattttac
ttgtttgatgaaattgaccaagccttggatgctcagcacagaaaagctgtttcagatatg
attatggaactagctgaacacgctcagtttattacaacaacttttaggcctgaactgcta
gagtcagctgacaagttctatggtgtaaaattcagaaacaaggttagtcatattgatgtg
atcacagcagaaatggccaaagacttcgtagaagatgacaccacgcatggttaa
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integrated database retrieval system
