Cygnus atratus (black swan): 118248587
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Entry
118248587 CDS
T09349
Symbol
ATRNL1
Name
(RefSeq) attractin-like protein 1 isoform X1
KO
K24332
attractin
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cata04091
]
118248587 (ATRNL1)
Lectins [BR:
cata04091
]
C-Type lectins
Others
118248587 (ATRNL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_5
Kelch_1
EGF_LMN_ATRN
Kelch_4
Kelch_3
Kelch_6
Kelch_2
CUB
EGF_TEN
PSI
NANM
EGF_Teneurin
EGF_laminin
EGF_2
TMEM100
PSI_integrin
Motif
Other DBs
NCBI-GeneID:
118248587
NCBI-ProteinID:
XP_035403591
LinkDB
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Position
7:complement(8012664..8505407)
Genome browser
AA seq
1383 aa
AA seq
DB search
MAPAARMEPGGALRRAGAAPAPPGAGSPFPSACCGCFSSLLDVNSWLLFYAFLYLALYAQ
VSQSKSCDKISCFSGHCVNSTCVCDQGWVGDQCQHCQGRFKLTEPSGYLTDGPINYKYKT
KCTWLIEGYPNAILRLRFNHFATECSWDHMYVYDGDSIYAPLIAVFSGLIVPEVRGNETV
PEVVTTSGYALLHFFSDAAYNLTGFNIFYSINSCPNNCSEHGKCTTSMSVPSRVYCECDK
YWKGEACDIPYCKANCGSPDHGYCDLTGEKLCVCNDSWQGPDCSLNVPSTESYWILPNVK
PFSPSVGRASHKAVLHGKFMWVIGGYTFNYSSFQMVLNYNLESSIWNVVPVSKGPLQRYG
HTLALYQEDIYMYGGKIETNNGNVTDELWIFNIHSQTWSIRTPAVLVHGQQYAVEGHSAH
IVELDSRDVVMIIIFGYSAIYGYTSIVQEYYIRSNSWLVPETKGAIVQGGYGHTSVYDEL
TKSVYVHGGYKALPGNKYGLVDDLYKYEVNTRTWTILKESGFARYLHSAVLINGAMLIFG
GNTHNDTSLSNGAKCFSADFLAYDVACDEWKILPKPNLHRDVNRFGHTAVVSNGSMYIFG
GFSSVLLNDILVYKPPNCEAFRDEELCKNARPGIRCLWNKKHCESWESGNANNILRAKCP
KKTVAADDRCYRYADCASCTANTNGCQWCDDKKCISANSNCSMSVKNYTKCHVRNEQICN
KLTSCKSCSLHLNCQWDQRQQECQALPAHLCGEGWSHIGDACLRINSSRESYDNAKLYCY
NLSGNLASLTTSKEVEFVLDEIQKYTLQKISPWVGLRKINISYWGWDDMSPFTNTTLQWL
PGEPNDSGFCAYLERAEVAGLKANPCTAMADGLVCEKPVVSPNQNARPCKKPCSLRTTCS
NCTSNGMECMWCSSTKRCVDSNAYIISFPYGQCLEWQTATCSPQNCSGLRTCGQCLEQPG
CGWCNDPSNTGKGQCLEGSSRGPMKPVSMHSNEMALDASLCPKEKNYEWSFIQCPACQCN
GHSTCINSNVCDQCKNLTTGKQCETCMPGYYGDPTNGGQCTACTCSGHANICHMQTGKCF
CTTKGIKGDQCQLCDSENRYLGNPLRGTCYYSLLIDYQFTFSLLQEDDRHHTAINFIANP
EQSNKNLDISINASNNFNLNITWSIGSTAGTISGEEIPVVSKANIKEYRDSFSCEKFNFR
SNPNITFYVYVSNFSWPIKIQIAFSQHNTIMDLVQFFVTFFSCFLSLLLVAAVVWKIKQT
CWASRRREQLMRERQQMASRPFASVDVALEVGAEQTDFLRGPLEGAPKPIAIEPCSGNKA
AVLTVFLCLPRGSSGVPPPGQSGLAIASALIDISQQKPADCKDKSSGVRNRKHHLSTRQG
TCV
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atggcccccgcggcgaggatggagccgggcggcgccctgaggagagcaggggctgccccc
gcgccccccggagccgggagccctttcccctccgcctgctgcggctgcttctcctcgctc
ctggatgtgaacagctggctgctcttctacgccttcttgtacctggccctctacgcccag
gtgtcccagtccaagtcctgcgacaaaatctcctgcttctcgggtcattgtgtcaactcc
acctgcgtctgtgaccagggctgggtgggagaccagtgccaacactgccagggcaggttc
aagttaacagaaccttctggatatttaacagatggaccaataaattataaatataaaact
aaatgtacatggttaattgaaggatatcctaatgcaatactgagattgaggtttaatcac
tttgccacagaatgtagttgggaccatatgtatgtatatgatggagattcaatatatgca
cctttaatagctgtatttagtggtttaatagtccctgaagtgcgtggaaatgaaactgtt
cctgaagttgttactacatctggctatgcactgctacacttttttagtgatgctgcttat
aatctgacaggatttaacattttctattcaattaattcttgtcctaataactgctcagaa
catggaaagtgtacaaccagtatgtccgttccaagccgggtatactgtgagtgtgacaag
tattggaaaggagaagcctgtgatattccgtattgtaaagccaactgtggcagtccagat
catgggtactgtgatttgacaggagagaagctgtgtgtatgcaatgatagctggcaaggt
ccagattgttctttgaatgtcccttccacggagtcttactggattttaccaaatgtaaag
ccattcagcccttctgtgggccgggcttcccataaggcagttctacatggaaaatttatg
tgggtgattggtggatacacttttaactacagttcattccaaatggtgttgaactacaat
ttggaaagcagtatatggaacgtagtacctgtatccaaagggccactccagagatatgga
cacactcttgctttgtatcaggaggacatctacatgtatggaggcaaaattgaaacaaac
aatggcaatgtcactgatgagctgtggattttcaacatacacagtcaaacgtggagtatc
agaactcctgcagtacttgtacatggccaacagtatgctgtggaaggtcattcagcacac
atagtagagctggacagcagagatgtggttatgataatcatttttggatattctgccata
tatggttatacaagcattgtgcaagaatactacatcaggtcaaattcttggcttgtacca
gaaacgaaaggagcgattgtacaaggtggatatggccatactagtgtctatgatgaactg
acaaaatctgtttatgtccatggcggatacaaagcattacctggtaataaatacggattg
gttgatgatctttacaaatatgaagttaatactagaacatggactattttgaaagagagt
ggttttgcaaggtaccttcattcagctgtcttaatcaatggagctatgctcatttttggt
gggaatactcataatgatacttccctgagtaacggtgcgaagtgcttttctgctgacttt
cttgcatatgacgtagcttgtgacgaatggaagattttaccaaaacctaatctgcaccga
gatgtcaacagatttggtcacactgctgttgtcagtaatgggtcaatgtacatatttgga
ggcttttcaagtgttcttttgaatgacatccttgtatacaagcctccgaactgtgaagca
ttcagagacgaagagctgtgtaaaaatgctcgtccagggataaggtgtctgtggaacaag
aaacattgtgaatcctgggaatctggaaatgccaacaacatccttcgagcaaaatgtcct
aagaaaacagttgctgcagatgacagatgttaccgatacgcagactgtgcaagctgtact
gccaatacaaatgggtgccaatggtgtgacgacaagaagtgcatttcagcaaacagtaac
tgtagcatgtcagttaaaaactacaccaaatgtcacgtgagaaatgaacagatctgcaat
aaactgactagctgcaaaagctgctcgctacacctgaactgccagtgggaccagcggcag
caggagtgccaggccttacctgctcatctgtgtggggaaggatggagtcatattggagat
gcctgcctccgcataaattctagtcgtgaaagctatgacaatgccaaactgtattgctac
aatttaagtgggaatcttgcctcattgacaacctcaaaagaagtggaatttgttctggat
gagatacagaagtatacgcttcagaaaatttcaccttgggtaggcttacgcaagatcaac
atctcctactggggatgggatgacatgtctccttttacaaatacaactctgcaatggctt
cctggagagccaaatgactctggcttctgtgcatatctagaaagagcagaggtggcaggt
ctgaaagcgaatccatgcactgcaatggcagatggtcttgtctgtgaaaaacctgtcgtt
agtcccaaccagaatgcaagaccgtgcaaaaagccatgctccctgagaacaacatgttcc
aactgtacgagtaatggtatggaatgtatgtggtgcagcagtactaaacgatgcgttgat
tcaaatgcctatataatctccttcccctatggacaatgtctagaatggcaaactgccacg
tgctcccctcaaaactgctctggactgaggacctgtgggcagtgcttggaacagcctggc
tgtggatggtgcaatgatcccagtaacactggaaaagggcaatgtttggaaggatcatca
agaggaccgatgaagcctgttagcatgcattctaatgaaatggcacttgatgctagtctt
tgcccaaaagaaaaaaactatgagtggtcttttatccagtgtccagcttgccagtgtaat
ggccacagcacctgcatcaacagcaatgtttgtgatcaatgtaaaaacttaacaacagga
aaacaatgtgaaacatgcatgccaggatattatggggatcccactaatggaggacaatgt
acagcttgcacgtgcagtggacatgcaaatatttgtcacatgcaaacaggaaaatgtttc
tgcacaactaaaggaatcaaaggagaccagtgtcaactctgtgactctgaaaataggtat
cttggaaatccacttaggggaacatgttactacagccttttgattgattaccagtttacc
ttcagcttattacaagaggatgatcgccatcacactgccataaacttcatagcaaatcca
gagcagtcaaataaaaatttggatatatcaattaatgcatcaaacaacttcaacctcaat
attacatggtctattggctctacagcaggaacaatatctggagaagagattcctgttgtt
tctaaggctaatattaaggaatacagagacagcttttcttgcgaaaaatttaactttcgg
agcaacccaaacatcactttctatgtctatgtcagtaatttttcatggccaatcaaaata
cagattgccttctcacagcacaatactatcatggatctggtgcagttctttgtcaccttc
ttcagttgtttcttatccttactgctggtagctgctgtcgtttggaaaatcaaacaaacc
tgttgggcttctcgacggagagagcaacttatgcgggagcgacagcagatggccagccgc
ccctttgcttctgtcgatgtagcactggaagtaggagctgagcaaacagactttctacga
gggccattagagggtgctcctaaaccaattgctatcgagccatgttcaggaaacaaagca
gctgtcctcacggtatttttatgtctgccaagaggatcatcaggagtcccacccccgggt
cagtcaggtcttgcaattgcaagtgcactgatagacatttcacaacagaagcctgcagac
tgtaaagataagagttcaggagtcagaaatcgaaaacatcatctttcaacacgtcaagga
acttgtgtctga
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