Cygnus atratus (black swan): 118248600
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Entry
118248600 CDS
T09349
Symbol
PDGFRA
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04010
MAPK signaling pathway
cata04020
Calcium signaling pathway
cata04144
Endocytosis
cata04510
Focal adhesion
cata04540
Gap junction
cata04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118248600 (PDGFRA)
04020 Calcium signaling pathway
118248600 (PDGFRA)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118248600 (PDGFRA)
09144 Cellular community - eukaryotes
04510 Focal adhesion
118248600 (PDGFRA)
04540 Gap junction
118248600 (PDGFRA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
118248600 (PDGFRA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cata01001
]
118248600 (PDGFRA)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cata04090
]
118248600 (PDGFRA)
Enzymes [BR:
cata01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
118248600 (PDGFRA)
Protein kinases [BR:
cata01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
118248600 (PDGFRA)
CD molecules [BR:
cata04090
]
Proteins
118248600 (PDGFRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
V-set
Ig_6
Motif
Other DBs
NCBI-GeneID:
118248600
NCBI-ProteinID:
XP_035403618
LinkDB
All DBs
Position
4:complement(49296103..49321401)
Genome browser
AA seq
1087 aa
AA seq
DB search
MGTSPGTFLILGCFLTGPFLTFCQLPLPTIVPNRNEMVVQLNSNFTLKCSGDSEVSWQYP
VTEGSHRIDIRHEENNSGLFVTVLEVGNASAAHTGLYVCYYNHTQVEDGEVEGKDIYIYV
PDPDMPFVPSIPEDQFILVEEGDPTIIPCRTSDPNAQVTLINSLDKAVYAFYDNKQGFIG
NFLAGSYTCKTTVKGVEFKSDVFLIYILRATSQLPVEIEALKTVYKTGETIVVTCVVFDN
EVVNLQWNYPGKVKEKGVIKLDDIKVPSQKLVYTLTIPEASVKDTGDYECTARHATKEVK
ENKKVVITVHDKGFIHLEPQFSPLEAVNLHEVKNFVVDVQAYPAPKMYWLKDNVTLIENL
TEIVTSSSRVQETRFQSILKLIRAKEEDSGSYTLVAENEDEIKRYTFSLLIQVPALILDL
VDDHHGSAGGQTVRCLAEGTPLPDVEWLVCKDIKRCSNDTSWTLLTNNISDIHMEAHLDE
KNMVESQVTFQKVEETLAVRCVARNDLGAVTRELKLVAPTLRSELTVAAAVLVLLVIVII
SLIVLVIIWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRILG
SGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNL
LGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGMNPADESTRSY
VILSFENTGEYMDMKQADTTQYVPMLERKEGSKYSDIQRSVYDRPASYKKKSLSESEVKN
LLSDDSSEGLSLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLA
RDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMM
VDSTFYNKIKSGYRMAKPDHATNEVYEIMVKCWNSEPEKRPSFYHLSEIVESLLPGEYKK
SYEKIHLDFLKSDHPAVTRMRGDCDNAYIGVTYKNEDKLKDRESGFDEQRLSADSGYIIP
LPDIDPVSEDELGKRNRHSSQTSEESAIETGSSSSTFIKREDETIEDIDMMDDIGIDSSD
LVEDSFL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgggtacttccccagggacattcctgatcctgggatgtttcctcacaggcccgttccta
acattttgccagcttcctctgccgactattgttcccaacagaaatgaaatggttgtacag
ctcaattccaatttcacactcaaatgctctggagacagcgaagtgagctggcagtaccca
gtgactgagggaagccacaggatagacatcagacatgaagagaacaacagtggcctcttc
gtgacagtgctggaagtaggaaatgcctcagctgctcacacgggcctgtatgtttgctat
tacaaccacactcaagtggaggatggggaagtggaggggaaggacatctacatctatgtg
cctgacccagacatgccttttgttccttccataccagaagatcagttcatcctagtagaa
gaaggtgatcccaccattatcccatgtcggacaagtgacccaaatgctcaagtgacttta
attaacagtttagacaaggctgtgtatgctttctatgacaacaagcaaggcttcatagga
aacttccttgcgggatcatacacatgcaaaacaacagttaaaggtgtggagttcaagtct
gatgtgttcctcatctatattttaagagctacttcacagctgccggttgaaattgaagct
cttaaaactgtctacaaaacaggcgagaccatcgtagtaacttgtgtggtctttgacaac
gaggtggttaatttacagtggaattatcctgggaaagtgaaagaaaaaggtgtgataaaa
cttgatgatatcaaagtcccatcgcagaagctggtttacaccttgaccattcctgaggca
tcagtgaaagacacaggggattatgaatgtactgctcggcatgcaaccaaggaggttaag
gaaaataagaaagtagtcattacagttcatgacaaagggttcattcatctagagcctcag
tttagccctttggaagctgtcaatctacatgaagtcaaaaattttgtcgtcgatgtgcag
gcgtacccagctccaaaaatgtactggttgaaggataatgtgactctgattgaaaatctt
actgagattgttactagttcaagcagagtccaggaaacaaggtttcaaagtatactaaaa
ttgatccgggccaaggaagaagatagtggatcttatactttggttgctgaaaatgaagat
gagattaaaagatacaccttctcactgctaatacaagttccagccttgatcttagacctt
gtggatgaccaccatggctctgcagggggacagacagtgaggtgcttggcagaggggacc
ccgcttcctgatgtggaatggctagtttgcaaggacattaaaagatgcagcaatgacact
tcatggactcttctgactaataatatctctgatatacacatggaagcccatctggatgag
aagaacatggtggaaagccaggtgaccttccagaaagtagaggaaaccctggctgtgcga
tgtgtggcaagaaacgaccttggtgctgttactcgggaactgaaacttgtggctcccacc
ttgcgatcagaactgacggtggctgctgcagtcttagtactattagtgattgtgataatt
tcactgattgtcctggtcatcatctggaagcagaagccaaggtatgagataagatggaga
gtcattgagtctatcagccccgacggccatgaatacatttatgtggacccaatgcaactg
ccttatgactccagatgggagtttcctcgagatgggttagtgcttggtcgaatccttggt
tctggtgcatttggaaaagtggttgaagggactgcgtatggattgagccgttctcaacca
gtgatgaaagtagctgtgaaaatgctgaaacctacagctagatccagtgaaaaacaggcg
ctcatgtctgaactgaagataatgacacatctcgggccccacctgaatattgtgaacctg
cttggagcttgtacaaaatcaggtcctatttacatcatcaccgaatactgcttttatggt
gatttggtgaactatctgcacaagaacagggacaatttcctgagccgccacccagagaag
cccaagaaagatttggatatctttgggatgaacccagctgatgaaagcacaagaagttat
gtgattttatcatttgaaaacactggagaatacatggacatgaaacaagctgatacaacc
cagtacgtgccaatgctggaaaggaaggagggatctaaatattctgatattcagagatct
gtgtatgatcggccggcttcatataagaagaaatctttgtcagaatcagaagtcaaaaat
cttctttcagatgacagttcagagggcctcagcctattggatttgctgagcttcacctac
caggttgcacggggaatggaattcttggcttctaaaaattgcgtacaccgtgacttggca
gctcgtaatgtccttctggctcaaggaaaaatcgtgaagatctgtgactttgggttggct
agagacatcatgcatgattccaactacgtctccaagggcagcactttcctcccagtaaaa
tggatggcacctgaaagcatttttgacaatctgtacacaacattaagtgatgtctggtct
tatggcattctgctgtgggaaatattttctcttggtggcacaccatatcctggcatgatg
gttgattctactttctacaataagataaagagtggctaccgaatggcaaaacccgatcat
gctaccaatgaagtgtatgagatcatggtgaaatgctggaacagtgaacctgagaaaaga
ccctctttttaccacttgagtgaaattgtggagagcttgttgcctggagagtacaaaaag
agctatgagaagattcacctggacttcctgaaaagcgatcacccagctgtcacacgcatg
agaggggactgtgacaatgcttacattggtgtcacctacaagaacgaagacaagttaaag
gacagggagagtggatttgatgagcagaggctgagtgctgacagcggatacatcatcccc
ctgcctgatattgaccctgtttctgaagatgagcttggcaagaggaaccggcacagttcc
cagacatctgaagaaagtgccattgaaactggttccagtagctctacttttatcaagaga
gaggacgagaccattgaggacattgacatgatggatgacatcgggattgactcctcagac
ctggtagaggacagcttcctgtaa
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