Cygnus atratus (black swan): 118248618 Help Entry 118248618         CDS       T09349                                  Symbol COL17A1 Name (RefSeq) collagen alpha-1(XVII) chain   KO K07603   collagen type XVII alpha Organism cata  Cygnus atratus (black swan) Pathway cata04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:cata00001]  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     118248618 (COL17A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen DUF5006 DUF2868 Motif Other DBs NCBI-GeneID:  118248618 NCBI-ProteinID:  XP_035403643 LinkDB All DBs Position 7:12830928..12866373 Genome browser AA seq 1521 aa AA seqDB search MDSVTKKTRQDGSEVTERLITETVTTRLTSLPPKGGSSSGLKTSSHTGGSGVEKRSYAHG SSYVTSSGSGRLNSSSSSGYRQAQSPSSTLTKSPGSTFERKTYVSRHATYEGSSSANSSP EFPRKEFASASTRGRSQSRESEIRVRLQSASPSGRWTELDDVKRLLKGSRSASCSPTRSP SSTLPIPKKAVVETKMVTESSQSVSGTYDTTILNTALPSYTWSSTLPAGSSLGGYHNSMA QSSSLINAMSHSTGSGTFGVPNNLAPTNHTLNTGLSTSSTVFGVQNNLSPNSSTLTQNAS AASTAYGMKNTSQSNTMASTGVSASAGGTVLSSQGDDILRKDCKFLLLEKDNAPAKKEME LLIMTKDSGKVFSASNTGLNGGSFAEDTLKKEKQGFSSSYATDTGFKSDANGGLKSVPTR DKATYAEIRNGDAGGAIGSAPSWCPCGSCCSWWKWLLGLLLAWLLLLGLLFGLIALAEEV RKLKSRVDDLEKINHSFLAVNQGSPNIAKDISRVDYLQGVAPSSTFPLENEESVWLMVKS RLNKEIERGYFRGERGEPGMKGDMGMQGPKGDRGLPGVPGIPGPIGHQGPEGPKGQKGSM GDPGMEGPMGQRGREGLPGPRGEPGPPGFGEKGDRGAVGEPGPPGPPGPPGSAGLKGLTG SPGPQGPPGPPGLQGFRGEAGLPGAKGEKGAAGAPGPKGDQGEKGSRGMTGEQGSRGIPG PPGEPGAKGPPGQAGRDGKPGEKGEPGLMGMPGARGPPGPSGDAGEPGLTGPQGPPGLPG NPGRPGTKGEPGAPGKVISAEGSSTVALPGPPGPPGPPGPTGPPGVPGPVGPAGLPGQQG PRGEKGSPGEAVVETIRTEVSSLASQMMADLQGRAGPPGPPGPPGESVQGPPGPRGPPEG LPGPPGPPGRPGSSMSTSETFLSGPPGPPGPPGPKGDQGEPGPRGFTGEPGEPGLPGFSS HGGTVTMQGPPGPPGPPGPKGDAGVPGAPGIPGASRGGSRQIQGPPGPPGPPGPPGPGGS SSQEIQQYVTDYLKSDNVRRYLTGAQGPPGPQGPPGPPGPPGIITTADGNSLDYAELATR VMSYMTSSSDRYQSYVSSVSTTSVLYQELLDMLQREEIRQYLIGPQGPPGPPGPGGDGVS LSLDYDELTRRFISYLSSSGMSIGLPGPPGPPGTPGMSYSDLAAYLRNSEFSGLVGPPGP PGPPGIPGSPGASLEDISAYLQNVGYSSISGVQGPPGPPGPPGPPGFSGTGLLSYADITH SDEFRSELIQYLKSDEVRSYISGPPGPPGPRGPPGPKGDSGLVAGSLASVYGESLASEHS HGGSLGAEGSHGASLGTGSSYGSSMSSMSSYSASMGSEGSYGASMGSDGSFDGLLAAEES HRRSAGSGRSYSNSFSGSLDYNELARHVSENLQSRGILQDLMSYTGQGPPGPPGPPGPPG ISRVFAAYGNVTEDLMDFFRAHGTVQGPPGEKGERGYPGPKGDPGPMGPPGRHGQRGPKG EKGEKGEQVYVGRRKRRSVGV NT seq 4566 nt NT seq  +upstreamnt  +downstreamnt atggattctgtaacgaagaaaacgaggcaagatggatcagaagttacagaaagacttatt acagagacagtaacgacaaggctgacttccttaccacccaaaggagggagcagcagtggg ctcaaaacatcatcccacactggagggagcggagtggaaaagaggtcttacgctcacggc agcagctatgtgacttcaagtggaagtggtagactgaattcatcatcgtcatctggctac agacaagcacagtctcccagctcaactctcaccaagtcacctggttcaacgtttgaaaga aaaacatatgtcagccgccatgcaacgtatgaagggagctccagtgctaactcttctcca gagttccccagaaaagaattcgcatctgcttccacacgagggagaagccaaagtcgagag agtgaaatacgagtccggcttcagagtgcctctccctccggcagatggacagagttggat gatgtaaaacgtttgctgaaaggaagtcgatcagccagctgcagccctactcgatctcca tcaagtactctcccgataccgaaaaaagctgtggtggaaacaaagatggttacggagagc tctcagtcagtgtcgggaacatatgatacaaccatactgaatactgccctcccttcatac acttggtcctcaactctgcctgctgggtcttcccttggtggataccacaacagcatggcc cagagctcatccttgatcaatgctatgtctcactctacaggatcaggtacttttggtgtt ccaaataacctggctcccaccaatcatactctgaacacaggcctgagcacttcctcaaca gtgtttggagttcaaaacaacctgtcaccaaactcttcaaccctgacccagaatgcctct gcagcctccacagcatatgggatgaagaacacttctcagagcaacaccatggctagtact ggtgtgtctgcctcagcagggggaaccgttttgagctcccagggggatgacattctgcgc aaagattgcaagttcctgctgctggagaaagacaatgccccagcaaagaaggagatggag ctcttgatcatgacaaaggatagtggcaaagtctttagtgcctcgaacaccgggcttaat ggaggatcctttgcagaagacacattgaagaaagagaagcaaggattttcttcttcttac gctacagatacaggcttcaaatcagatgcaaatggaggactgaaatcagtaccaacaagg gacaaagcaacatatgcggaaatacgaaatggtgatgcagggggtgcaattggatcagca ccatcttggtgtccctgtggttcctgctgtagctggtggaaatggctcctcggtttgctt ctggcctggttgcttctcctggggttactctttggactcattgctctggcggaagaagtg agaaagctgaaatctcgtgtggacgacctggaaaaaatcaatcacagtttcctggcagtt aaccaagggagtccaaacatagcaaaagacatttcaagagtagactatcttcagggtgtg gcaccctcttcaaccttccctcttgaaaatgaagaatcagtttggttgatggtgaagagc agactgaacaaggaaatagaacgaggctacttccgaggggagagaggagaacctggtatg aaaggtgacatgggaatgcaaggtcctaaaggagatcgaggacttcctggtgtcccaggc attcctggtccaattgggcaccaagggccagaaggaccgaaaggacagaaagggagcatg ggtgatcctggtatggagggtcccatgggacaaagaggtcgagaagggttaccaggacct cgaggagagcctggaccacctggatttggagaaaaaggagacagaggtgctgttggtgag ccaggtcctccagggccacctggtcccccaggttctgctggccttaaaggtctgacgggt tctccaggaccccaaggccctccaggtcctcctggcctacaaggatttagaggagaagca ggtctcccaggtgctaaaggtgagaaaggagctgctggagcacctggacccaaaggtgac cagggtgagaaaggttctcgtggaatgacaggtgaacaaggctcaagaggtatacctggt cctccaggagagccaggggccaaaggaccaccaggacaagctggccgtgatgggaagcca ggtgaaaaaggtgaaccaggtcttatgggaatgccaggagcccgaggccctccaggacct tctggagatgcaggagagccaggtctcacaggaccccaaggacctccaggacttccaggg aaccccggcagaccagggactaaaggggaacctggagctccaggcaaagtcatcagtgct gagggttcatcgactgttgctctcccaggaccccctggcccacctggcccacctggcccc actggaccccccggtgttccaggtcctgttgggccagctggtctccctggacagcaaggt ccacggggtgagaagggatccccaggtgaagctgtggtagaaactatcaggacagaagtc tcatcactggcatctcagatgatggcagatttacaagggcgagcaggaccaccaggtccc cctggaccaccaggtgaatctgtgcagggaccccctggacctcgtggcccaccagaggga ttgccaggacctccaggcccaccagggagaccaggatcttctatgtccacctcagaaaca ttcctctcaggcccaccgggtccaccaggtccaccaggcccgaagggagaccaaggtgaa ccaggtccacgaggattcacaggagaaccaggtgaacctggccttccaggattctcctcc catggtggtacagtcaccatgcagggacctccaggcccaccaggcccgccaggacccaaa ggtgatgcaggtgtcccaggcgctcctggcatcccaggagcatctcgaggtggatccaga caaattcagggacccccaggtcctcctggcccacctggtcctcctggcccaggtggaagt tcatctcaagagatccagcagtatgtcactgactacctgaaaagtgacaacgtaaggcgt tatttgaccggtgcccaaggcccaccaggccctcaaggcccaccaggccctccaggccca cccgggatcatcaccactgcagatgggaatagcttggattatgcagagctggctacccgg gttatgagctatatgacaagctcttcagatcgttatcagtcatatgtcagttcagtctca actacatcagttttgtatcaagaacttttggacatgctgcagagagaagagattcgtcag tatctgattggaccccagggcccaccggggcctcccggaccaggaggagatggagtgtct ctgtcactggattatgatgagttgaccagacggtttatcagctatttgtcaagttctggg atgagcattgggctccctggaccacctgggcctccggggacacctggcatgtcgtacagt gacctagcagcatacctgcgaaactccgaattcagtggtcttgttggtccccctgggcct ccagggcctccagggatccctggatcacccggcgcctctctggaggacatctctgcttac ctacaaaatgtgggatactcttccatctccggagtgcagggcccgcctggcccaccaggc cctccagggccaccaggcttctcgggaaccgggctcctgtcctacgctgacatcacccac agcgacgagttcaggagcgagctgatccagtacctgaagagtgacgaagttcgaagctac atctcggggccgcccgggccccctgggccacggggaccaccaggacccaaaggagatagt ggtttggtggctgggtctctggcgtcggtgtacggcgagtcgctggcttctgagcactcg cacggaggatcccttggtgctgagggctcccacggagcgtcactgggcacaggcagctcc tacggcagctccatgagcagcatgtcatcgtacagcgcttccatgggcagcgagggctct tacggtgcctccatgggtagtgatggctcttttgatggcttgctggcagctgaggagtcc cacaggagatcagcaggttcaggcagatcttacagcaactccttctctggatccctggat tacaacgagctggcacgccacgtgtcagagaacctgcagagccgaggtatcctccaggac ctgatgtcttacactggacaagggccaccaggtcccccaggtcctcctggtcctcctgga atcagcagggtctttgcagcctatggcaatgtcactgaggaccttatggacttcttcaga gcacatggaactgtccaggggccacctggtgagaagggcgagcggggttaccccggaccc aaaggtgaccctggaccgatgggcccgccaggacgccatgggcaaaggggacccaaagga gagaaaggcgagaaaggtgaacaagtgtacgttggcagaagaaaaagaagaagtgttggg gtttaa

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