Cygnus atratus (black swan): 118248653
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Entry
118248653 CDS
T09349
Symbol
SHOC2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
118248653 (SHOC2)
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Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_9
LRR_13
LRR_5
LRR_NLRC4
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
118248653
NCBI-ProteinID:
XP_035403707
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Position
7
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AA seq
582 aa
AA seq
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MSSNLGKEKDCKEKDPKVPSSKEREKEAKASGGFGKDSKEKEPKTKGKDAKDGKKDSSST
QPGVAFSVDNTIKRPNPATGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHMLPSAIK
ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
LREIPSVVYRLSSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIP
KSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtaacctgggaaaagaaaaggactgtaaagagaaggatccaaaagtcccgtcg
tcaaaagaaagggagaaggaggccaaagcctctggaggatttgggaaagacagcaaagag
aaggagcctaagaccaaagggaaagatgccaaagacggaaagaaagactccagtagcacg
cagcctggggtagctttttcagtggacaatacgataaaaagacctaatccagccacaggt
acccgcaaaaaatccagcaatgctgaagtgatcaaagagctaaataaatgccgggaagag
aattcaatgcgcttggacttgtccaagaggtctatacacatgcttccatccgctatcaaa
gagttaacgcagttaacagaactttatttatacagtaacaaactgcagtctctaccagca
gaggtgggctgtcttgtgaacctgatgacactggccctgagtgaaaactcactcaccagt
ttgcccgactctctggataacttgaagaaactgcgcatgcttgacctgcggcataacaaa
ctgcgagagatcccgtcggtggtgtacaggctaagctctctcgccactctttacctacgc
tttaatcgtataactactgtggaaaaggatatcaaaaacttgtcaaaactcaccatgctt
agcatacgagagaacaaaatcaagcaactacctgctgaaattggtgagctgtgtaacctc
ataacgctggatgtagcgcacaatcagcttgaacaccttccagaagagattggaagttgc
acgcagatcaccaaccttgacttgcagcacaatgagctcttggacctgccagaaaccata
ggaaatctgtccagtctaagtcgtcttggcctgaggtacaataggctgtcagcaattccg
aagtctttagcaaaatgcagtgaacttgatgaactgaatctggagaacaacaacatctct
actttaccagagggtcttttatccagccttgtcaaactgactagtttaacgctggccagg
aactgcttccagtcctatcctgtgggtggcccgtcccagttctccacaatctactctctc
aatatggagcacaaccgcatcaataaaatcccctttggaattttctctagagctaaagta
ttaagtaagctgaacatgaaggacaatcagctgacctctctcccgctggactttggaact
tggactagtatggtagaactgaacttagcgactaaccagctcacaaaaatccctgaggat
gtgtctgggcttgtttctcttgaggttcttatattgtcaaacaatctcctaaaaaaactt
ccccatggaatcggaaatctacggaaactccgagagttggatctagaggaaaacaaactg
gaatccttgccaaatgaaatagcttacctcaaggatctgcagaaattggttctgactaat
aatcagttgaccacccttccaagaggtattggtcaccttaccaatctaacgcaccttggg
cttggagagaatcttctcacacaccttcctgaggaaattggtacactggagaatctggaa
gaactgtatttgaatgacaaccccaatctgcacagccttccctttgagctggctctttgc
agcaaactgtcaataatgagtattgagaactgcccgctcagccaccttccacctcagatt
gttgcaggaggaccctccttcatcattcagttcctaaaaatgcagggaccataccgtgcc
atggtctga
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