Cygnus atratus (black swan): 118248692
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Entry
118248692 CDS
T09349
Symbol
TRUB1
Name
(RefSeq) pseudouridylate synthase TRUB1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cata03016
]
118248692 (TRUB1)
Enzymes [BR:
cata01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
118248692 (TRUB1)
Transfer RNA biogenesis [BR:
cata03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
118248692 (TRUB1)
Prokaryotic type
118248692 (TRUB1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
118248692
NCBI-ProteinID:
XP_035403766
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Position
7:complement(8563937..8594726)
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AA seq
287 aa
AA seq
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MAGREAGGGVAGRAAQKLFSLSGLFAVYKPKGPTSAAVLNLLKERLLAEAGVQTNGNKRK
SQVLKIGHGGTLDSAATGVLVVGIGKGTKLLKTMLAGSKKYTAIGLLGKATDTLDATGKI
TEEKPYDQVTKRDLENVLLKFTGDIMQVPPLYSALKKDGERLSTLVKRGEAVEAKPARPV
RVYSLSLQQFQPPLFTLDVECGGGFYVRSLVSDIGKELSTCASMQELTRTKHGPFTLEEH
ALHEDKWTIDEIARSLEHCMSLLPGEPSHKKFKTEHPGETAVSCEDK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggccggcagggaggcgggcggcggcgtggcgggcagggcggcccagaagctcttctcc
ctgagcgggcttttcgccgtctacaagcccaaggggcccacctcggccgccgtgctcaac
ctcctgaaggagaggctgctggcagaagctggtgtgcaaacgaatggtaacaaaagaaaa
agtcaggtcttgaaaattggacatggtggaactttggacagtgcagcgacaggagttctg
gtggttggcattggaaagggaacaaaactgctgaaaactatgttggctggttccaagaag
tacactgctattggactactgggcaaagctactgatacgttggatgctacaggaaaaata
actgaagaaaaaccttatgaccaggtaacaaaaagagatcttgaaaatgtgctgctgaag
ttcacaggggacataatgcaggttcctccgctctattctgctttgaagaaggatggagaa
aggctatcaactctggtgaagagaggagaagcagttgaagcaaagccagctcggccagta
agagtgtacagcctctctctccaacagttccagccaccactgttcacactggatgttgaa
tgcggcggtggcttttatgtcaggagcctggtcagcgacattggcaaagaactgtctacc
tgtgccagcatgcaagagctgacccgaaccaaacacgggccatttacgctagaggagcat
gcacttcatgaagacaaatggacaattgatgaaattgcgcgatctttagagcattgcatg
tctcttctcccaggagaaccatctcataaaaaatttaagacagagcatcctggagaaact
gctgtgagctgtgaagataagtga
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