Cygnus atratus (black swan): 118248693
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Entry
118248693 CDS
T09349
Symbol
VTI1A
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
118248693 (VTI1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cata04131
]
118248693 (VTI1A)
Membrane trafficking [BR:
cata04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
118248693 (VTI1A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
Laminin_II
LMBR1
Peptidase_S46
DUF1664
MFS_2
Sec8_N
WIT1_2_N
Fusion_gly
SKA2
CAP59_mtransfer
Motif
Other DBs
NCBI-GeneID:
118248693
NCBI-ProteinID:
XP_035403768
LinkDB
All DBs
Position
7:complement(9747105..10015916)
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AA seq
217 aa
AA seq
DB search
MSSDFESYEQDFAVLTADITGRIGKVPKLLGDEKKQMVANVEKQLEEARELLEQMELEVR
EIPPQSRGMYSSRMRSYKQEMGKLEADFKRSRIAYSDEVRNELLGDDGNSSENQRAHLLD
NTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARERLRETDANLGKSSRI
LTGMLRRIIQNRILIVVLALFIILTTAMAIYFSVKRR
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgacttcgagagctacgagcaggacttcgccgtgctgacggccgacatcacg
ggccgcatcggcaaggtgcccaagctgctcggagatgagaagaagcagatggttgcaaat
gtcgagaaacagcttgaagaagcaagggaactgcttgagcagatggagcttgaagttcga
gagattccacctcaaagtcggggaatgtacagcagtcgaatgagaagctacaaacaagaa
atgggaaaacttgaagctgatttcaaaaggtcacggatcgcctacagtgatgaggtgcgg
aatgagctcctaggggatgacgggaattcctcagagaaccagagggcacatctgctcgat
aacacagagaggctggaaaggtcatctcggagactagaggctggataccaaatagcagtg
gaaaccgaacagattggacaggagatgctggaaaacctcagccatgacagagagaagatc
cagcgtgctcgggaaaggcttagagaaacagatgcaaacctggggaagagctccaggatt
ttgacagggatgttgagaaggatcatccaaaaccgaattttgatcgttgttctggcactc
ttcatcatcctcaccaccgcgatggctatttatttttctgtcaagagacgctga
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