Cygnus atratus (black swan): 118248741
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Entry
118248741 CDS
T09349
Symbol
NELFCD
Name
(RefSeq) negative elongation factor C/D isoform X2
KO
K15181
negative elongation factor C/D
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
118248741 (NELFCD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cata03021
]
118248741 (NELFCD)
Transcription machinery [BR:
cata03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
118248741 (NELFCD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
Motif
Other DBs
NCBI-GeneID:
118248741
NCBI-ProteinID:
XP_035403835
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Position
16:complement(5106934..5116585)
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AA seq
583 aa
AA seq
DB search
MEDADYFEGSAAEWGNEADGGAQDDEDGEGEDDAEVQQECLKKFSTPDYIMEPSIFNTLK
RYFQAGGSPENVIQLLSENYTAVAQTVNLLAEWLIQTGVEPVQVQETVENHLKSLLIKHF
DPRKADSIFTEEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGE
ITSVSTACQQLEVFSRVLRTSLATILDGGEENLEKNLPEFAKMVCHGEHTYLFAQSMMSI
LAQEEQGGSAVRRIAQEVQRYAHEKGHDASQITLALGTAASYPRACQALGAMLSKGALNP
ADITVLFKMFTSMDPPPVELIRVPAFLDLFMQSLFKPGAKINQDHKHKYIHILAYAASVV
EMWKKNKRVSINKDELKSTSKAIETVHNLCCNENKGASELVAELSTLYQCIRFPVVAMGV
LKWVDWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLVKLFETEHSQLDVM
EQLELKKTLLDRMVHLLSRGYVLPVVSYIRKCLEKLDTDISLIRYFVTEVLDVIAPPYTS
DFVQLFLPILENESIAGTIKTEGEHDPVTEFIAHCKSNFIMVN
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgccgattacttcgaagggagcgcggcggagtgggggaacgaagcggacggg
ggggcgcaggatgatgaggatggggagggagaggatgatgccgaagtccagcaagaatgc
ctgaagaaattttcaactcctgactacataatggagccgtctatatttaacacgctaaaa
agatatttccaagcaggaggttctccagagaatgtcatccagcttctttctgaaaactat
acagcagtggcacagactgtaaatttgctggcagaatggctcattcaaacaggtgttgag
ccagtgcaagttcaggagactgtggaaaaccatttaaagagcttacttatcaagcatttt
gatcctcggaaagcagattccatctttacagaggaaggagagactccagcatggcttgag
caaatgatagcacacactacatggagagatctcttttacaagttggcagaagcccatcca
gactgtttaatgcttaattttactgtgaagcttatatctgatgctggatatcaaggggaa
ataactagtgtttcaacagcatgtcagcaactggaagtattttccagagtcctgcgcaca
tctctggcaacaattttagatggaggggaagaaaaccttgagaaaaacctccctgagttt
gctaagatggtttgccatggagagcacacgtatctttttgctcaatctatgatgtccata
ttagctcaagaagagcaaggagggtcagctgtcagacggattgctcaggaggttcagcga
tatgctcatgaaaaaggccatgatgctagtcaaatcactttagcgttgggtactgcagcc
tcttatcctcgtgcgtgtcaggctcttggtgcaatgctgtccaaaggagctctgaatcca
gcagatatcactgtcttgttcaaaatgtttacaagcatggacccacctccagtagaactg
attcgagtacctgcctttctggacctcttcatgcagtcattgtttaagccaggtgctaag
atcaaccaggaccacaagcacaaatacattcacatactggcatatgcagctagtgtagta
gagatgtggaaaaagaacaagagagtcagcataaacaaggatgaactcaagtcaacttca
aaagccattgaaactgttcacaacctgtgttgcaatgagaacaaaggagcatcagagttg
gttgcagaactgagcactctctatcagtgcatcaggtttccagtggtggcaatgggtgtg
ttaaagtgggtggactggacagtgtcagaaccacgatacttccagctgcagactgatcat
accccggttcatctggcattactggatgagatcagtacgtgccatcagctgcttcatccc
caggttctacaacttcttgtcaaactctttgaaacagaacattcacagcttgatgtaatg
gagcagctggaattgaagaagacactcctggatagaatggtgcacttactcagtcgagga
tacgtcctgcctgttgtcagctatatccgcaaatgcctggagaagctagacacagatatc
tctctcatcagatactttgttacagaggtattggacgtgattgctcctccatatacctca
gactttgtacagctttttcttccaatcttggagaacgaaagtattgcaggtactattaaa
acagaaggtgaacatgatcctgtcactgagtttatagctcactgcaaatctaactttatt
atggtgaactaa
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