Cygnus atratus (black swan): 118248858
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Entry
118248858 CDS
T09349
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cata03041
]
118248858 (RBM39)
Spliceosome [BR:
cata03041
]
Common components
Common spliceosomal components
General mRNP proteins
118248858 (RBM39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_MUD2_C
RRM_occluded
DUF8400
PRP38_assoc
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
118248858
NCBI-ProteinID:
XP_035404152
LinkDB
All DBs
Position
16
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AA seq
522 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHDRKRSRSKERKRSRD
RERKKSRSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQNEVLAAAASVQPLATQCFQL
SNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAV
NALHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVPVRR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatattgatattgaagcaatgcttgaagctccttacaagaaggatgagaac
aaattgagcagtgccaatggccacgaagaacgaagcaagaagagaaaaaagagcaagagc
cgaagtcgaagtcatgacagaaagaggagccgaagcaaggaacgcaagcggagccgagac
cgggaaagaaaaaagagcagaagtcgggaaaggaaacggagcagaagcaaagaacgcaga
cgcagtcgttctagaagtagagaccgcagattcagaggccgctatagaagtccctattct
ggtccaaaattcaacagtgccatcagagggaagattggtctgcctcacagcatcaaatta
agcagacgacgatccagaagcaaaagtcctttcagaaaagacaagagccctgttagagaa
cctattgataatcttacccctgaagagagggatgctcgaacagtattctgcatgcaacta
gctgcaagaattcgaccaagagatttggaagaatttttctctacagtagggaaggttcgt
gatgtgcgaatgatttctgatagaaattccaggcgttcaaagggaattgcttatgtagaa
tttgttgatgttagttcagtacctctggcaataggactaactggacagagagtcttgggt
gtaccaattatagtacaagcatcacaggcagagaaaaacagagcagcagcaatggcaaat
aatttgcagaagggcagtgctggtcctatgaggctctacgtaggatcgttacacttcaac
ataactgaagatatgcttcgaggaatttttgagccatttggcaggattgaaagcattcag
ctgatgatggatagtgaaactggacgttcaaaaggatatggatttattacgttctcagac
tctgagtgtgccaaaaaggctttggaacaactcaatggatttgagctggctggtaggcca
atgaaagttgggcacgtaactgagcgcactgatgcttccagtgctagctcatttttggac
agtgatgagttggaacggactggaattgacttgggaacaactggtcgccttcagctgatg
gcaaggcttgcagagggtactggtttgcagattcccccagctgcacagcaggctctgcag
atgagtggatcattggcatttggagctgtggcagatttgcaaacaagactttctcagcag
aatgaagttttggctgcagctgcttctgtacaaccacttgcaacacagtgcttccagctt
tccaacatgtttaatcctcaaactgaagaagaagctggctgggatacggaaattaaagat
gatgtgattgaggaatgtaacaaacatggaggagttatccacatctacgtagacaaaaat
tcagctcagggcaatgtgtatgtcaaatgtccttcaattgctgctgccattgcagctgta
aatgcattgcatgggaggtggtttgcaggtaaaatgattacagcagcttatgtacctctt
ccaacataccatagccttttcccagattctatgactgcaacccaactactggttcctgtt
cgacgatga
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