Cygnus atratus (black swan): 118249019
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Entry
118249019 CDS
T09349
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cata04131
]
118249019 (LRBA)
Membrane trafficking [BR:
cata04131
]
Endosome - Lysosome transport
Others
Others
118249019 (LRBA)
Endosome - Golgi transport
118249019 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
118249019 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Beta-prop_WDR5
Neurobeachin
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_WDR75_1st
WDR55
WD40_WDHD1_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_ACSF4
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
SUKH_6
Motif
Other DBs
NCBI-GeneID:
118249019
NCBI-ProteinID:
XP_050566317
LinkDB
All DBs
Position
4:33248299..33644088
Genome browser
AA seq
2852 aa
AA seq
DB search
MASGDKQVVQPTGDGGGGGGGGGGAGKEGNAAEGGSVLQPLNPGVPIRGIRMKFAVLTGL
VEVGEVSNKDIVETTFNLLVGSDFDLEMNFIIQEKDGITCMVELLDKCDVTCQAEVWSMF
TAILKKSIRNLQACTEVGLVEQVLKRIDRADNMIADLLVDMLGVLASYNLTVRELKLFFS
KLQGEKGRWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFH
TWLRMDPVNNINVDKDKPYLYCFRTNKGLGYSAHFVGGCLIVTSIKSKGKGFQHCVKFDF
KPQKWYMVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADAN
RVFCGQMTSVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLDEHHKLLLYDGKLS
SAIAFMYNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSALHSIGGVQ
VLFPLFAQLDYRQYSSDHVDTTVCSTLLAFIMELLKNSIAMQEQMLSCKGFLVIGYSLEK
SSKAHVTRAVLELCLAFSKYLSNLQNGVPLLKQLCDHVLLNPAIWIHIPAQVQLILYTYL
STEFIGTVNIYGAIRRVGTVLLVMHTLKYYYWVVNPQDRSGITPKGVDGPRPTQKEILSL
RAFLLMFVKQLVMKDYGIKEEELQAILNYLLTIHEDDNLMDVLQLLVALMSEHPSSMIPA
FDQRNGLQVVYKLLASKSEGIRVQALKVMGYFLKHLAPKRKAEVMLGHGLFSLLAERLML
QTSLITMTTYNVLFEILTEQICTQVIHKQHPDPDSAVKIQNPQILKVIAILLRNSPQTPE
TLEVRRAFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCCFNPKTSEEQKITEMVYTIF
RILLYHAIKYEWGGWRVWVDTLSITHSKVTFEMHKESLSQMYREYQEKGGEESGIGPSAP
IRTISGVSKGVEIARKQQCLEIKEAAAAAAPSFQDDMESTTEKNESDGDLQTHSVSEQTK
EEDRETKQDLKAMPSSEFSPEPEAINPSVSEISSGLAEAIEDSLSKPQELMEETVAASLV
IETTLEGETPASPEGVEESTVEMEDEDDFVDLKEESTVPLPSEELAETDKKHSSTENQVT
KQEEVIEKQSESVLLKSEDNVGMNGKKQELALSETANSAVQEVATQLDSEGKKKLEEKTV
SSEKTDENANAHVAEPAGASEKRIAKLDVSSVASDTERLELKASTCLEAPLPARSIPESS
RQQDSSGQELAATSDTQRRDSRSTVFRIPEFKWSLMHQRLLTDLLFSIETDIQMWRSHST
KTVMDFVNSSDNVIFVHNTIHLISQVMDNMIMACGGILPLLSAATSATHELENIEPTQGL
SVEASLTFLQRLINLVDVLIFASSLGFTEIESEKNMSSGGVLRQCLRLVCAVAVRNCLEC
QHHARMKPIGDLAKNQKTMQGFIGTGKSTAKSPVDIVTGGISPIRDHDRLLQDMDINRLR
AVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQNERRPPNHSQSFKKSENENNG
TPATDVENPSAALSASTSASTEVSESTASLRRRDSGLGEEPTSVQTNSSGGGVEAGLLNV
SAGPDAISEVLSTLSLEVNKSQEGRNETETEDSKPATSVPAAKNVNVKDILRSLVSTPAD
GTAVDPALLPPAFLGVLGEGGAEHHVQFHSFDRSVVVPPKKSTISSSTAAMGIPANSVSV
VSSLDSAQALDLSGESPGRGSSNSKLPSVPTVSSVPGDSASNMSITDRLEHALEKAAPLL
REIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQKNAG
LAFIELVNEGRLLSQTMKDHLVRVANEAEFILNRQRAEDINRHAEFESLCAQYSADKREE
EKMCHHLITAAKYRDQVTATQLIQKIINILTDKHGAWGSSVSSRPREFWRLDYWEDDLRR
RRRFVRNPLGSTHPEATLKAAGEHAPDEDILVKGKQSIKSQVLGNQNSESEILLEGDDDI
TSFIEEREVENLTGPVALSAPAQLVAPSVVVKGTLSITLSELYFEVDEEDPSFKKIDPKI
LAYTEGLHGKWLFSEIRSIFSRRYLLQNTALEIFMANRVSVMFNFPDQATVKKVVNCLPR
VGIGAIFGLPQTRRISLASPRQIFKASNMTQRWQHREISNFEYLMFLNTIAGRTYNDLNQ
YPVFPWVITNYESDELDLTLPSNFRDLSKPIGALNPKRAAFFAERYESWEDDQVPKFHYG
THYSTASFALTWLLRIEPFTTLFLNLQGGKFDHADRTFSSISRAWRNSQRDTSDIKELIP
EFYYLPEIFVNSNNYNLGVMDDGTVVSDVELPPWAKTPEEFVRINRLALESEFVSCQLHQ
WIDLIFGYKQQGPEAARSLNVFYYLTYEGAVNLSSITDPVLREAVEAQIRSFGQTPSQLL
IEPHPPRSSAMQVYLLLQSPLMFTDQAQQDVIMVLKFPSNSPVAHVAANTQPGLTNPAVI
TVTANRLFAVNKWHNLPAHQGAVQDQPYQLPVEIDPLIASNTGMHRRQITDLLDQSIQVH
SQCFVITSDNRYILVCGFWDKSFRVYSTDSGRLIQVIFGHWDVVTCLARSESYIGGNCYI
LSGSRDATLLLWYWNGKTNIIGDNPRGDIATPRAILTGHDYEITCATICAELGLVISGSK
EGPCLIHSMNGDLLRTLEGPETLEGPENCLRPKLIQASREGQCVIYYENGLFCVFSVNGR
LQATMETDDKIKAIQLSRDGQYLLTGGDNGVVMVWQMWDLKQLFAYPGCDAGIRSMALSY
DQRCILTGMASGSIVVFYNDFNRWHHEYQTRY
NT seq
8559 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggagacaaacaagttgtgcagccaacaggtgatggtggaggaggaggagga
ggaggaggtggagcggggaaagaaggaaatgccgctgaagggggaagtgtgctgcagcct
ctgaatccaggagtccccatccgaggcatcaggatgaaatttgctgtgctgacaggactc
gtggaagtcggcgaggtgtccaacaaggacatagtcgaaactacatttaatctgcttgtt
gggagcgattttgacttggaaatgaactttattattcaagaaaaagatggcattacctgc
atggtggaattgctggataaatgtgacgtcacctgccaggccgaggtgtggagcatgttt
acagcaatcctgaagaaaagtatacgcaatctacaagcatgtacggaagtggggctggtt
gaacaagtgctcaagaggattgatagagctgacaacatgattgcagatctcttagtggat
atgctgggtgtgttggctagctataacttgacggttcgagagctcaagttattcttcagc
aaacttcaaggagaaaaagggagatggccaccacacgctgggaagttgttgtctgtgtta
aaacacatgcctcagaaatacggacctgatgccttcttcaactttccaggaaaaagtgct
gcagctattgccttacctcctatagccaagtggccctaccagaatggatttacttttcac
acttggttaagaatggatcctgtaaataatatcaatgtggacaaggataagccttactta
tattgttttcgaacgaacaaaggacttggctattctgctcactttgttggaggctgcttg
attgtaacatccataaaatcaaagggaaaaggttttcagcattgtgtaaaatttgacttc
aagccacaaaagtggtatatggttactattgtgcacatctataaccgctggaagaatagt
gagcttcgatgttacgtgaatggggagctggcatcttatggagaaataacgtggtttgtc
aacaccagtgatacatttgacaaatgtttcctgggctcttcagaaacagcagatgccaat
cgagtgttttgtggacaaatgacatctgtttacctttttagtgaggctctcaatgctgct
cagatctttgccatttatcagcttggtctgggatataagggaacattcaaattcaaggca
gaaagtgatctcttccttgatgaacatcacaaattgttgctgtatgatggcaaactatcc
agtgctattgcttttatgtacaatccaagggctacagatgcacagctctgtctagagtca
tcccctaaggataacccttctatttttgttcattcaccacatgcactcatgctgcaggat
gtgaaagcagtcttaacacattctatccagagtgccctgcactctattggaggagtgcag
gtactttttcctctctttgcacaattggactataggcaatattcatcagaccacgtagac
acaactgtttgttctacgttattggcttttatcatggagttgttgaagaactccattgct
atgcaagaacagatgctttcctgtaagggcttccttgtgataggatatagtctggaaaag
tcttccaaagcccatgttacacgagctgtactagagttatgccttgccttttcaaaatac
ctgagcaacttacaaaatggggtgcccttgctgaaacagctgtgtgatcatgttctcctt
aatcctgcaatatggattcatatcccagcacaggttcagctgatcctgtatacttattta
tctacggagttcattggcactgttaacatctatggtgcaatccggagggttgggaccgtt
cttttggtcatgcataccctaaagtattattactgggtagtgaatcctcaggatcgcagt
ggtataactcccaaaggcgtagatgggccaaggcctactcaaaaagaaattttatctttg
cgagcattcttgttgatgttcgttaaacagctagtgatgaaggactatggaataaaagaa
gaagaattgcaggcaatcctcaattatcttctcactatccatgaggatgacaatctaatg
gatgtcttgcagttgcttgttgctctgatgtcagagcatccaagttctatgatccctgct
tttgatcagaggaatggattacaggtcgtctacaagcttttagcatcaaaaagtgaaggc
atcagggtgcaagctctgaaagtgatgggatatttcttaaagcatcttgctccaaagaga
aaggctgaagtcatgcttggacatggattgttctctttgttggctgaaaggctgatgctt
cagacaagcttaatcaccatgaccacatacaatgtcctatttgagattctgactgaacag
atttgcacacaagtgatacataaacaacatcctgacccagattcagcagtgaagatacaa
aatcctcagattttgaaggttattgcaatcctgctacgtaattctccacagacaccagaa
actctggaggttcggcgagcatttctctcagatatgattaaactttttaataacagcaga
gaaaataggaggagtttgttgcagtgctctgtctggcaggagtggatgctttctctttgc
tgttttaatcctaagacttctgaggaacagaaaataactgagatggtgtataccatattt
cgaattttgctctaccatgcaatcaaatatgagtggggtggctggcgtgtttgggtggat
acgctgtctatcacacattcaaaggtaacatttgaaatgcacaaagagagtctttctcaa
atgtacagggaataccaagaaaaaggaggtgaagagagtggaataggtccttctgctcca
ataagaacaatttctggagttagcaaaggagtggaaattgcgagaaagcaacagtgtttg
gagataaaagaagctgctgctgctgcagctccttccttccaggatgatatggagtccact
actgaaaaaaatgagtctgatggtgacctgcaaacacattcagtgtctgaacagacgaag
gaggaagacagggagactaaacaggatttaaaagcaatgcctagttcagaattttctcca
gagccagaagcaataaaccccagtgtttcagaaattagtagtggactagctgaagcaatt
gaagattctctgagcaaacctcaggagcttatggaagaaacagtagctgcttcattggta
atagaaactactttggaaggagaaactcctgcaagtccagaaggagtggaagaatcaaca
gtagagatggaggatgaggatgacttcgttgatttgaaagaggaaagcactgtgccttta
ccttcagaagaacttgcagaaacagacaaaaagcatagctctactgaaaatcaagtgaca
aagcaggaagaagtgatagagaagcaatctgaatctgtgcttttaaaatctgaggataat
gttggcatgaatgggaaaaaacaagaactggcattatcagaaaccgcaaattctgcagtt
caggaagtagcgactcaactggattcagaagggaaaaagaaactggaagaaaagactgtt
tctagtgaaaaaacagatgaaaatgcaaatgcacatgtagcagagcctgctggagcttct
gaaaaaagaattgctaagcttgatgtttctagtgttgcatcagatacagaaagactggaa
ctgaaagccagcacatgtctagaagcacctctgcccgccaggtccatacctgagagctca
agacagcaagattcttcaggacaagagctagctgctacgtcagatacacagagaagagac
tctaggtcaactgtgttccgcattcctgagtttaagtggtcactgatgcatcagcgcttg
ctcacagacttactcttttccattgaaacagatatacagatgtggagaagccattctaca
aaaactgtgatggactttgtgaatagcagcgacaatgtcatatttgtacacaacacaatt
cacctcatctctcaagtgatggacaacatgatcatggcttgtggtggtatattgccattg
ctgtctgctgctacatctgctactcatgaattggagaatattgagccgactcaaggactt
tcagtagaagcgtctttaacatttctccagagattaatcaaccttgtggatgtgctaatt
tttgcaagctctcttggtttcactgaaattgaatctgagaaaaatatgtcatctggagga
gttctgcgacaatgtcttcgtctagtatgtgcagtagcagtaagaaattgcttggagtgt
caacaccatgcacggatgaagcctattggagaccttgcaaagaaccaaaaaacaatgcag
ggctttataggaacaggaaaatccacagcaaagagtccagtggacattgtgactggtgga
atttctccaatacgagaccatgacagacttctgcaggacatggatattaatcgacttcga
gcagtagttttcagagatatagaggatagtaaacaggctcagttcttggctttggctgtt
gtatatttcatttctgtgctcatggtttcaaaatacagagatattctggaaccccagaat
gaaagaagaccaccaaaccatagccagtcattcaagaaatcagagaatgaaaataatgga
actcctgctacagatgtggaaaacccatctgctgctctcagtgcttcaacttcagcctcc
actgaagtttcagaaagtacagcatctttacgaagaagggactctggtcttggggaggaa
ccaacttcagtgcaaacaaacagttcaggtggtggtgttgaagcaggacttctgaatgtc
agtgcaggtccagatgctatcagtgaagtacttagcactctctcattagaagtaaataag
tctcaggagggcagaaatgagacagaaactgaggatagtaagcctgcaacttctgtgcca
gctgcaaaaaatgttaatgtaaaagacatcctgagaagcttggtaagcacaccagctgat
gggactgcagtggatcctgctcttctgccaccagccttccttggagtacttggtgaagga
ggtgctgagcatcatgtacagttccattcctttgacaggagtgttgttgtaccaccgaag
aaatcaaccatttcctcttctacagctgctatgggtattcctgcaaattctgtcagtgtg
gtttcttctttagattcagcccaagccctagatctgtcaggagaatctcccggaagggga
tcatctaattcgaaattgccatctgtccctacagtttcttcagtgccaggagattctgct
tcaaatatgagtattacagacaggcttgaacatgctttggaaaaagctgccccgcttctg
agagagatttttgtggattttgctccctttctttctcggactcttttgggtagccatgga
caggagttgctgatagaaggtacaagtctcgtgtgtatgaaatctagcagttcagttgtg
gagctagtgatgcttctttgctctcaggagtggcaaaactcaatacagaagaatgctggc
cttgcctttatagagcttgtcaatgaaggaaggttgctgagtcaaactatgaaggaccat
ttggtcagagtggctaatgaagcagaatttatcttgaacagacagagagcagaggatatt
aaccggcatgctgaatttgagtcactgtgtgcccagtactctgctgacaagcgggaagaa
gaaaaaatgtgtcatcatttgataacagcagctaagtaccgagaccaagtgactgcaact
caactaatacagaaaattatcaacatcctgacagacaagcatggagcctgggggagctct
gtgtcaagtcgtcctcgtgagttctggcgccttgactactgggaagatgacttgcggcgc
cggcgacgatttgtgcgtaacccccttggatcgacacatcctgaagcgacactaaaagca
gctggagaacatgctcctgatgaagatatacttgttaaaggaaagcagtccatcaagagt
caagtcttaggaaatcagaactcagaaagtgagattctcttggaaggcgatgacgatatc
acatcattcattgaggagagagaagtggagaacttaacgggaccagttgccctaagcgca
ccagctcagcttgtggcaccctcggtggtagtgaaaggcactctttccatcactctttct
gagctctactttgaggtggatgaagaagatcccagttttaagaaaatcgacccgaagatt
ctggcatatacagaaggacttcatggaaaatggctcttttcagagattcgatctatcttt
tctcgacgttatcttctgcaaaatacagcactggagatattcatggcaaatagagttagt
gtcatgttcaacttccctgatcaagcaacagtaaagaaagtggttaattgtcttcctcgg
gtcggtattggtgctatctttggactaccccagaccaggcgcatttctttggctagtcca
cgacagattttcaaagcttcaaatatgacccagcgatggcaacaccgagaaatttccaac
tttgaatacctgatgtttctaaacactatagcaggtcgcacttacaatgatttaaatcag
taccctgtcttcccttgggttatcaccaactatgaatcagatgagttggaccttacactt
cctagcaacttcagagatttgtcaaagcctattggagctttgaacccaaagagagcagca
ttctttgctgagagatacgaatcatgggaagatgatcaggttccaaagtttcactatggc
acacattattcaactgcaagttttgcactcacgtggttattaagaattgaaccctttaca
acactgttcctaaatctgcaaggtggaaagtttgatcatgcagatagaaccttttcatct
atttcaagagcatggcgcaacagtcagcgtgacacttctgatatcaaggaattgattcct
gaattctattacctcccagagatattcgtcaacagcaacaattacaatctaggagtgatg
gatgatggaacagttgtgtctgatgttgaacttccaccatgggccaaaaccccagaagaa
tttgttcgcataaacagactggcattagaaagtgagtttgtttcctgccagcttcatcag
tggattgatctgatttttggctacaaacagcaagggccagaggctgctaggtccctgaat
gtattctactatttgacttacgaaggagctgttaatttaagttcaataacagatcctgta
ttgagagaggctgttgaagctcaaatacgaagttttggacagaccccttcccaactgctc
atagaaccacatcctccaagaagttctgccatgcaggtgtatctcctcctgcagagtcca
ttgatgttcacagaccaagctcaacaggatgttatcatggttctgaagttcccatccaac
tcccctgtcgctcatgtagcagccaacacccagccaggtctgaccaaccctgctgtgatc
acagttactgcaaataggctatttgctgtaaacaagtggcataatcttcctgctcatcaa
ggtgctgtacaagaccagccttaccagctgccagtggaaatcgatcctctcatagccagc
aatacaggtatgcacagaaggcaaatcactgaccttttagaccaaagcattcaggtacat
tcccagtgttttgtcatcacctctgataatcgttacatcttggtctgtggcttctgggac
aagagtttccgagtttattctactgattcagggagactgatacaagtaatatttggccac
tgggatgttgtaacctgtcttgctcgttctgaatcctatattggaggaaattgttatatt
ctgtcaggatcacgtgatgcaacactgctgctttggtactggaatggcaaaactaacatc
attggtgataatccaagaggtgatattgcaactcctcgagctattttgacaggacacgac
tatgagatcacctgtgctaccatttgtgctgaacttggtttggtaataagtggttcaaaa
gaaggaccatgtctcatacattctatgaatggagatctgctgaggacattagaaggtcct
gaaacattagaaggtcctgaaaattgcctgagaccaaaacttattcaagcttcaagagaa
ggccaatgtgtaatatattatgaaaatggcctcttctgtgtattcagtgtgaatgggaga
cttcaagccactatggaaacagatgacaagatcaaggcaatccaactgagtcgagatgga
cagtacctgcttacaggtggagacaatggagttgtcatggtatggcagatgtgggacctc
aagcagctttttgcttacccagggtgtgatgctggaatccgatccatggccctgtcatat
gaccaaaggtgtatactgactggcatggcatctgggagcatagtggttttctacaatgat
ttcaatcgttggcatcatgaatatcaaacccgatactga
DBGET
integrated database retrieval system
