Cygnus atratus (black swan): 118249124
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Entry
118249124 CDS
T09349
Symbol
GRIN2A
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04020
Calcium signaling pathway
cata04080
Neuroactive ligand-receptor interaction
cata04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
118249124 (GRIN2A)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118249124 (GRIN2A)
04082 Neuroactive ligand signaling
118249124 (GRIN2A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cata04040
]
118249124 (GRIN2A)
Ion channels [BR:
cata04040
]
Ligand-gated channels
Glutamate (ionotropic)
118249124 (GRIN2A)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
118249124
NCBI-ProteinID:
XP_035404694
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All DBs
Position
15:complement(16842576..17021870)
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AA seq
1458 aa
AA seq
DB search
MRKIGCALLVLQALLAPLDLVHGAEKSYPILNIAVILGRTKYITERDIRGLWTREMSADL
TVDVNVVTLLVNQTDPKSIITHVCDLMSGTKIHGVVFGDDTDQEAVAQILDFISSQTSIP
ILGIHGGASMIMADKDVMSTFFQFGASIQQEAIVMLKIMQDYDWHVFSLVTTTFPGYRDF
INVIKTTVENSFVGWDMQNIIVLDTAFGDAKTQIQLKKIHSSVILLYCSKDEAVYILDEA
RSLGLTGYDFFWIVPSLVSGNTEITPKEFPSGLISASYDEWDYSLEARVRDGLGIIATAA
SAMLEKYSFIPEAKTSCYGQLEKNDRPSHTLHKFMMNVTWEGKDLSFTADGYQAHPRLVV
IVLNKDREWEKVGKWENNSLSLKYSVWPRYSSFADSEPDDNHLSIVTLEEAPFVIVEDVD
PLMESCQKNTVPCRKFVKINNSTNEGTNVKKCCKGFCIDILKKLSKTVKFTYDLYLVTNG
KHGKKVNNVWNGMIGEVVYHRAVMAVGSLTINEERSEVVDFSVPFVETGISVMVSRSNGT
VSPSAFLEPFSASVWVMMFVMLLIVSAMAVFIFEYFSPVGYNRNLAQGKDPHGPSFTIGK
AVWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVT
GLSDKKFQRPHDYSPPFRFGTVPNGSTERNIRNNYPDMHLYMTKYNQKGVEDALVSLKTG
KLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPWKRQIDLALLQFV
GDGEMEELETLWLTGICHNEKNEVMSSQLDIDNMAGVFYMLAAAMALSLITFIWEHLFYW
KLRFCFTGICSDRPGLLFSISRGIYSCIHGVHIEXKKKSPDFTLTNSQSNMLKLLRTAKN
MTNINPSRINSPKRTADFIQRGSLIMDMVVDKGNLVFSDNRSFQTKDNFFGENVSELQTL
PGNRHKDNLNNYVFQGQHPLTLNESNPNTVEVAVTAEAKVNSRPRQLWRKSVESLRQESV
RQSQGSQRENGSDENRQLSVKSQRYLPEEIVHSDVSETSSRATCHMEPENNNKHHKTKDN
FKKRTVASKYPKDCSEVELTYLKTKQSSPRDKIYTIDADNEPGFHLDTPQYIENIVLPET
IELPDVYQDHNDNYRKAEHANRTPLHNEDSLPNNDQYKLYAKHYSLKDKNASLVDMNDRY
RQNSTHCRSCLSNLPTYTGHYSGRSPYKCDACLRMGNLYDIEEDQMLQDTTNLSLPEEIY
EHSWSHNNALQYHKKNKLRISRQHSFDNIADKSREIDIGRPSRSISLKEKEKFLQSSPYA
SMFSVPSSKLLSNKASLLTHALEDSKRSKSLYPVHSEDNPFLHSYRDDQHLSLRRNPPDL
YKYSLPSKGRNDNYLRSSIKSTASYCSRDGRIHNDMYISEHVLPYVANRNSVYSTPRVLN
SCSNRRVYKKMPSIESDV
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaattggctgtgctctcctggtactccaagctcttctggcgcccctggatctt
gttcatggagcagagaagagttatcccatcctgaacattgcagtgattctgggaaggacc
aagtatatcacagagagagatatcagaggtctctggaccagggaaatgtcagcagacctg
actgttgatgtcaatgtagtgacccttctggtgaaccagactgaccctaaaagcatcata
acacatgtttgcgacttgatgtccggcaccaagatccatggagtagtttttggagatgat
actgatcaggaggcggtagctcagattttggattttatttcgtcacagacttctattcca
attcttggaattcacggtggggcctccatgataatggcagataaggatgtgatgtcaacg
ttcttccagtttggggcttctatccagcaggaagccattgtcatgctgaagatcatgcag
gattatgactggcacgtgttttctctggtgaccaccaccttccctggatatcgagacttc
atcaatgtcattaagaccacagtggaaaatagttttgtgggctgggacatgcagaatatc
atcgtacttgatactgcctttggagatgccaagacacaaattcagctgaagaaaattcat
tcatctgtcatcctgctgtattgctccaaagatgaagctgtctacatactggatgaggct
cgctccctgggccttactggctatgatttcttttggatagttcccagcctggttagtggt
aacacagaaatcacccccaaggagtttccttcaggactcatttcagcatcttatgatgag
tgggactacagcttagaagctcgggtgcgggatggccttgggattattgccactgctgca
tcagccatgctggaaaaatattccttcattcctgaagcaaaaactagctgttatggtcaa
ctggagaaaaatgaccggccatctcacaccttgcacaagtttatgatgaatgtgacttgg
gaaggtaaagatttgtccttcacagccgatggttatcaggcacatcccaggctggtggtg
attgtactgaacaaagatcgcgaatgggagaaggtggggaaatgggagaacaactcactc
agcctgaagtactctgtctggccaaggtacagctcttttgcagacagtgaaccggatgat
aaccatttgagtattgtcaccttggaggaggctccctttgtcattgttgaggatgtggat
cctttgatggaaagttgccaaaaaaacactgtgccatgtcgtaaatttgtcaaaattaac
aactcaactaatgagggaactaatgtaaagaagtgctgcaaaggattctgcattgatatc
ttgaagaaattgtctaaaactgtcaagttcacgtatgatctgtatttggtgactaatggg
aaacatggcaaaaaagtcaataatgtgtggaatggaatgattggtgaagtggtatatcat
cgtgcagttatggctgtggggtctctcactattaatgaagaacgctctgaagtggttgac
ttttcagtgccatttgttgagactgggattagtgtcatggtgtcacggagcaatggcaca
gtttcaccatctgcttttctagagccttttagtgcttccgtctgggtgatgatgtttgtg
atgcttctcattgtgtccgccatggctgtctttatatttgagtactttagtcctgtagga
tataacaggaacttagcacaagggaaagatccccatggaccatccttcaccattggcaag
gcagtgtggttactctggggcttggtattcaacaactctgtgccagtgcaaaaccccaaa
gggacgaccagtaaaatcatggtgtcagtttgggccttctttgctgtcattttcctggct
agttatactgccaacttagctgcatttatgattcaagaggaatttgttgaccaagtgact
ggactgagtgataaaaagtttcaaaggccacatgattattcacctccttttcgatttgga
acagtcccaaatggaagcacagagaggaatatcagaaacaactaccctgatatgcacctt
tacatgacaaagtataatcagaaaggagttgaagatgccttggtcagcttgaaaactggg
aagctggatgctttcatctatgatgcagcagtgctaaattacaaggctggaagagatgaa
ggctgcaaacttgtcacaataggcagtggatacatctttgccactacgggctacggaata
gcacttcagaaaggatcaccttggaagagacaaattgatctagccctccttcaatttgtt
ggtgatggggaaatggaagagttagaaaccctttggctgactggcatttgccacaatgag
aagaacgaagtcatgagcagccagctggatattgacaacatggcaggagtgttttacatg
cttgcagcagccatggcactcagtttaataacctttatctgggaacacttattttactgg
aaacttagattctgcttcactggaatctgctcagatagaccgggattgttgttctcaatc
agcaggggtatttacagctgcattcatggagtacatattgaangaaaaaagaagtctcct
gactttactttgaccaattcccaatccaacatgttaaaactactacgaacagcaaaaaat
atgaccaatatcaatccttcaagaattaactcccccaaaagaacagctgattttattcag
aggggttccttgattatggacatggtcgtggataagggaaacttggtattttctgataac
agatcctttcagacaaaggacaacttttttggtgaaaatgtgagtgaactgcagacactt
ccaggcaatcggcacaaggacaatcttaacaactatgttttccaaggtcagcatcctctc
acgttgaatgagtccaatccaaatacagtagaggtagcagtaacagcagaagcaaaagtg
aactccagacccaggcagctttggaggaaatctgttgaatctttacgtcaagaatctgta
cgtcagagccaaggttcccagagggaaaacgggtcagatgaaaacaggcaactttcagtg
aaaagccaaagataccttcccgaagagattgtccattcagatgtatcggagacatcaagc
cgagctacttgccatatggaaccagaaaataacaacaagcaccacaaaaccaaggacaat
tttaaaaaaagaacagtagcatcaaaatacccaaaagattgtagtgaagtggaactaaca
tatctgaaaaccaagcagagctctccacgggataaaatctacacaattgatgctgacaac
gagccaggattccacttggacacacctcagtacatcgaaaacattgtccttccagaaact
atagaacttcctgatgtttatcaagatcacaatgacaactacaggaaagcagagcatgct
aacaggactccactacataatgaagacagtcttccaaataatgaccagtataaactttat
gcaaagcattacagtttaaaagataaaaatgcttccctagttgacatgaatgatagatac
agacagaattccacccactgtaggagctgtctttctaatttgcccacttatacgggacat
tattcaggcagatctccctataaatgtgatgcatgcttgcggatggggaacctctatgat
attgaggaagatcagatgctgcaggatacaacgaacttatcacttcctgaagaaatatat
gaacatagttggtcacataataatgctctgcaatatcataaaaaaaacaagttgaggatt
agcaggcaacattcttttgataatattgctgataagtccagggaaattgatattggaaga
ccttctcgtagtataagcttgaaagaaaaagagaagtttctacaaagtagtccatatgca
agcatgtttagtgttccctcaagcaaactgttgagcaacaaagcctcacttttaactcat
gctctagaggacagtaagcggagcaagtccctgtatcctgttcactcagaagataatccc
tttctgcactcgtatcgtgacgaccagcacttatctcttaggcgaaatccacctgatctt
tataaatattcattaccatccaaaggaagaaatgataattatttaaggtcatccataaag
tctacagcatcatactgttcgagggatggtcggatccataatgacatgtacatttcagag
catgttttgccttatgttgcaaataggaatagcgtgtactcaactccaagggttttaaat
tcctgtagcaataggcgtgtgtataagaaaatgcctagcattgaatcagatgtttaa
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