Cygnus atratus (black swan): 118249234
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Entry
118249234 CDS
T09349
Symbol
REXO5
Name
(RefSeq) LOW QUALITY PROTEIN: RNA exonuclease 5
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
118249234 (REXO5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cata03009
]
118249234 (REXO5)
Ribosome biogenesis [BR:
cata03009
]
Eukaryotic type
Pre-60S particles
RNases
118249234 (REXO5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNase_T
Na_H_antiport_3
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
118249234
NCBI-ProteinID:
XP_035404871
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Position
15:complement(8363810..8378037)
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AA seq
775 aa
AA seq
DB search
MAGSGSACKRPAEAGGAAEGLGVARKRSRTERGGRHKAKEKSSRLSAALFGEDCEVSHDQ
VYELLKYAALGKCHNATQPSWCHIYHQSHLAGVVVIVLHEMSQLHFYKFYLQFKHLRKVF
QHRFTLPPTSASFLANLYGEGANVKPQNNAQGLISTSSGCIPKNSDLQCDPIIQKYGESK
QGLTRYILTSEELKKNDYPMKGSPGCKGYVHTECDQQRTDSSPLFGLDCEMCLTARGNEV
TRVSLVDAQGQCLLNELVKPESTIVNYRTRFSGITRKMLLPVKTRLPDVQSRLKKILPHD
AVLVGHSLNADLRALQMIHPSVIDTSLLFARNEGRRFKLKFLAKAVLGKEIQCDQKLGHD
PAEDARAALELAQFFIEQGPAKVAELNLEMLLTAERLTEVSQNKSALQPQGCRVQKQSND
PPHLSKPCFLDCLQVTGQKPLLLGRQEADSSGLCQSNLSTSNKQILQRALEDVPLSTFSI
IQFSLGPEYIASHLLAGFREKVRSKLTDMLTIYAGPFEESFCLKAVKKEFGRCGPIQSLI
VVTETYQPYVCIQYEVLEAAQLAVESLDGAEVAGSCIKVQRPVSAATLDCDVLIQELELD
IENEGVIYVAGLKKSLTETDLQEEFSQLEALETLFLPKDLQSGRHRNCCFLKFQTSQSAV
DALEVINSWAVKGSKLRSRKALASGHLWRWIWQMNHSREKQVGNSLCEKTAPLPDSEQNL
RKKVKKLDQIIKKLYRGLQKNTLCVVLFPGTNSIHGLQSGLGLMGIKDHGGGSAC
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggccggcagcgggagcgcctgcaagaggcccgctgaggccggcggcgccgcggagggg
ctgggggtggctcggaagaggagcaggacggagcggggcggccggcacaaggcgaaggaa
aagtcatctcgcttgtctgcagctttatttggtgaggactgtgaagtcagccatgaccag
gtttatgagttgttaaagtatgcagctttgggaaaatgccacaatgccacgcagcccagc
tggtgccatatttatcaccaaagccacctggctggggttgtggttattgttctacatgag
atgagccaactccatttctacaaattctatttacagttcaaacacctcagaaaagtgttc
cagcatagattcacattaccacctacttcagctagcttcctagccaacctgtatggagaa
ggagcaaatgtgaaacctcaaaacaatgcacaaggcttgatttccactagcagtggatgt
attcctaaaaactcagacttgcaatgtgatcccatcatccagaaatacggagaatcaaaa
caaggccttactagatacattctaacttcagaagagctgaagaaaaatgattatcccatg
aaaggctcccctggctgtaagggttatgtgcatacagagtgtgatcagcagaggacagac
agcagccccctctttggtctggattgtgaaatgtgcctgactgcaagggggaatgaagtc
actcgtgtctctttggtggatgcacagggtcaatgcctcttgaatgaactagtcaaacct
gaaagcacaatagtgaactaccgcaccagattctcaggaatcacaaggaaaatgctgctt
ccagtgaaaacaagattgccagacgtacaaagcagattaaaaaaaatacttccgcatgat
gcggtattggtgggtcattctctaaatgctgatctccgggctttgcaaatgatccaccct
agtgttattgatacttcattgctttttgccagaaatgaaggtcgaagatttaagctaaaa
tttctagccaaagctgttttagggaaggagatccagtgtgaccagaagcttggtcatgat
cctgcagaagatgcaagagctgcattggaattggctcaattctttattgagcaaggacca
gcaaaggtagcagaactaaatttggaaatgctgctgacagctgaaagactgactgaggtc
tctcagaacaaatctgcgttacagccacaaggatgtagagtccagaagcagtcgaatgat
cctccgcatctatctaaaccatgttttttagactgcttgcaggtgaccggccaaaaaccc
ctccttttgggcagacaggaagcggactcttctggcctgtgtcagagtaacctgagcact
tcaaacaaacagattcttcagagagccttagaagacgttcccctctccacattcagtatc
attcagttcagtttgggtccagagtacattgcatctcatcttcttgctggatttcgtgaa
aaggtgagaagcaagctgactgacatgctgacaatctatgcaggtccttttgaagaaagt
ttttgcctgaaggctgtgaaaaaagaatttgggaggtgtgggccaatccagtctctgata
gtggtaacggaaacataccagccctacgtctgtatccaatacgaagtgctggaagctgct
cagcttgccgtggaaagcctagatggagctgaggtagcaggatcctgcattaaggttcag
agacccgtctctgctgcaacgctggactgtgatgttctgatacaggaactagaactggat
atagaaaatgaaggtgtgatttatgtggcgggtctaaagaagtcattaacagagacagac
ttacaagaagaattcagccagttggaagccctggaaactctgttcctgccaaaggatctc
cagagtggaaggcacaggaactgctgtttcctcaaattccagacatcacaaagtgctgtg
gatgcccttgaagttataaatagctgggctgtgaagggcagcaagttaagaagtaggaag
gcgcttgcttcaggtcacctctggagatggatttggcaaatgaatcacagcagggagaag
caagtaggaaacagcttatgtgagaagacggcacctctacctgactctgagcagaatcta
aggaaaaaggtgaagaagttggaccagattataaaaaagctttatagaggtctgcagaag
aataccttgtgcgttgttctctttcctggaacaaacagcatacatggattgcagtctggc
cttggtctgatgggaataaaagaccacggagggggcagtgcttgttaa
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