Cygnus atratus (black swan): 118249419
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Entry
118249419 CDS
T09349
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04510
Focal adhesion
cata04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118249419 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118249419 (LAMB1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
ATG17_like
LAMB1
F5_F8_type_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
118249419
NCBI-ProteinID:
XP_035405243
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All DBs
Position
1:complement(15335201..15377564)
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AA seq
1781 aa
AA seq
DB search
MGLLPLYLALWVAAAQEPEYSSGCAEGSCYPATGDLLIGRAARLSASSTCGLRQPEPYCI
VSHLQEDKKCFICDSEDPFHDTLNPDSHRIENVVTTFAPNRLKLWWQSENGLENVTIQLN
LEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTWQVYRYFAYDCESSFPGISTGPMKKVD
DIICDSRYSDIEPSTEGEVIYRVLDPAFRIEDPYSPRIQNLLKITNLRIKFVKLHTLGDN
LLDSRMEIREKYYYAIYDMVVRGNCFCYGHASECAPVEGFEEEVEGMVHGHCMCRHNTKG
LNCEQCLDFYHDLPWRPAEGRNTNACKKCNCNGHSTQCHFDMAVYMATGNTSGGVCDDCQ
HNTVGRNCEQCKPFYFQHPERDLRDPDVCEPCNCDPAGSQNGGICDRYTDFSTGLIAGQC
RCKLFVEGERCDLCKEGFYGLSADDPAGCQSCACNPLGTHPGGNPCDSETGNCYCKRLVT
GKQCSQCLPEHWGLSNDMDGCRPCDCDQGGALHNNCSSESGQCECRPHMFGRQCNQVEPG
YYFISLDHYIYEAEEANLGPGVNIIERQYTQDRTPSWTGIGFVRVPEGAYLEFYIDNIPY
SMEYDIVVRYEPQLPDQWEKAVITVSRPGKIPTGSRCGNTVPDDDNQVVSLPPGSRYVVL
PRPVCFEKGLNYTIRLELSQYSSVDTEMESPYTLIDSLVLMPYCKSLDIFTVGGSGEDVV
TNSAWETFQRYRCLENSRSVVKTPMTDVCKNIIFSISALLHETALSCQCDPQGSLSSVCD
PSGGQCQCRPNVVGRQCDRCAPGTFGFGPSGCRPCECHVRGSYNAFCDAETGQCHCFPGV
YGRQCDRCLPGFWGFPSCQPCHCNGHADDCSPYTGECLHCRDHTAGHNCERCEAGYYGDP
VLGSGDHCRPCPCPDGPESGRQFASGCYQDPVTLQVMCVCSTGYIGSRCDECASGFFGSP
DEVGGACQPCQCNNNIDTTDPEACDKRTGTCVKCLYHTEGENCQLCKEGYYGSALQQDCR
KCVCNYLGTVREDCDSAESCRCEAATGQCRCLPGVVGQTCDRCAPHTWRLASGTGCEPCD
CDTTRSLGLACNEFTGQCHCMPGFGGRTCRECQELFWGDPGVECRACDCNPRGIQTPQCD
RATGQCICNEGVEGPRCDKCSRGYSGFFPDCVPCHQCFALWDVVISELANRTQQFLDRAN
ALKITGVTGPYQQTLSTLEEKLGEIKTIIAQNPAAEPLKNIGNLFEEAEKLTADVTVKIA
DLEENLSTLAEKSNSTDSDLSALETDAKSLDRVVKELAEQLEFIKISDVRGALDSITKYF
QMSLEAEERVNASTVHPDSAVELSAQTRQEVEDLIDEKEAQFKAKQEEQSRLLDELAGKL
QSLDLAEVSAKTCGTPAGASCAESECGGLNCRTDDGQKKCGGPGCEGLVTVAHNAWQKAM
DFDRDILSALAEVEQLSRMVSEAKQRADEAKQNAQEVLLKTNATKEQVDRSNEDLRNLIK
QIRDFLMQDSADLDSIEAVANEVLNMEMPSTPQQLQALTEDIRERVESLSDVEVILQQSA
GDIARAEMLLEEAKKASKGATDVKVTADMVKAALEEAEKAQNAAEKAIKQADEDIKGTQD
LLTSIESENAASEETLNNATLRLFELERSVEDLKQKAATNSENVDKIEEKAGTAKQNAEE
VKQVLNTELNSKYKTVEDLIAKKTEESADARRKAGMLQDEAKALLAQANSKLQLLKDLEN
TYENNQKVLEDKAKQLVELEETVRSLLQTISQKVAVYSTCL
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atggggctcctcccgctctacctcgcgctgtgggtcgcggcggctcaggagcccgagtac
agctccggctgcgccgagggcagctgctaccccgccaccggcgacctcctcatcggccgc
gccgcccgcctctccgcctcctccacgtgtggcctccgccagcccgagccctactgcatc
gtcagccacctccaggaggacaaaaaatgtttcatatgtgactctgaggatcccttccat
gacaccctcaatcccgacagccatcgcatcgaaaacgtggtcaccacgtttgctccgaat
cgcctgaagctctggtggcagtcagaaaacggtctggaaaatgtgactatccagctgaac
ctggaggccgagtttcatttcactcatctcatcatgaccttcaagacattccgtcctgcc
gcaatgttgatagaaagatcatctgattttggaaaaacatggcaagtatataggtatttt
gcatatgactgtgagagctcgtttcctgggatttcaactggacccatgaagaaagtggat
gatatcatttgtgattcccgatactccgacattgaaccttcaactgagggagaggtaata
tatcgtgtcttagatcctgcttttagaattgaagatccgtacagtccaaggattcaaaac
ctcttgaagatcacaaatctgagaatcaagttcgtcaagctgcacacgctgggagataac
ctcctggactcacggatggagatcagggagaagtactactatgccatttacgacatggtg
gtgcgtgggaactgcttctgctacggacacgccagcgagtgtgccccggtggagggcttt
gaggaggaggtggaaggaatggtccacgggcactgcatgtgcagacataataccaaaggc
ttaaactgtgagcagtgtttggatttctaccacgacttaccctggcgacctgccgaaggc
cgcaatactaacgcatgcaaaaagtgcaattgcaacggccactccacccagtgccacttc
gacatggccgtgtacatggccacggggaacaccagcgggggggtttgtgacgactgccag
cacaacaccgtgggacgcaactgcgagcagtgcaagcccttctacttccagcaccccgag
agggacctgcgggacccggacgtctgcgagccctgtaactgtgacccagctggctcccag
aatggtggcatatgtgatcgctacaccgatttctctactggcctcattgctggacagtgc
cgttgtaaattatttgtcgaaggggagcgttgcgacctctgcaaagaaggtttctatggt
ctgagtgccgatgacccagcgggctgtcagtcttgtgcatgtaatcctctgggtacccat
cccggagggaatccttgtgattcagagacaggaaactgctattgtaagcgcctggtgaca
ggaaagcagtgcagtcagtgcctgccggagcactggggcctgagcaatgacatggatgga
tgtcggccctgcgactgtgaccaggggggagcactgcacaacaactgctcgagtgaatct
ggccagtgtgagtgccggccccacatgtttggacgtcagtgcaatcaagtagagcctggc
tattacttcatctcgctcgaccattacatctacgaggcagaggaagccaacttgggtccc
ggagtaaacataatagagcgccagtacacacaggaccgcacaccatcatggacaggcata
ggatttgtgagggtccctgagggggcgtacctggagttctacatcgacaatatcccctac
tccatggagtatgacatcgtggtccgctacgagccacagttgccggatcagtgggaaaaa
gcagtgatcactgtgtcgcgcccaggcaagattcccacaggtagccgatgtggcaacacg
gttcctgatgatgataatcaggtcgtctcgctgcctcctggctccagatacgtcgttctc
ccacggccagtctgctttgagaaggggctgaattacaccatccgcctggagctgtcccag
tactcctcggtggacaccgagatggagagcccgtacacgcttattgactctctcgttctc
atgccgtactgcaaatcactggacatattcacagtgggaggctcaggcgaagacgtggtc
acaaacagtgcttgggaaactttccaaagataccggtgcctggaaaacagcaggagcgtt
gtgaaaaccccgatgacggatgtctgcaagaacatcatattcagcatttctgcactttta
cacgagaccgccttatcctgccagtgtgacccccagggctcgctgagctcggtgtgcgac
cccagcggaggacagtgccagtgtcggcccaacgtggtgggaaggcagtgtgacagatgt
gcccccggcaccttcgggtttgggccgagcggatgccggccttgtgagtgccacgtccga
ggttcgtacaacgccttctgtgacgcggagacgggccagtgccactgcttccccggcgtg
tacgggcgacagtgcgaccgctgcctgcccggcttctggggcttccccagctgccagccc
tgccactgcaatggccacgctgacgactgcagcccctacaccggggagtgcctgcactgc
cgggaccacacggcaggccacaactgcgagaggtgcgaggccggctactacggagaccct
gtcctgggctcgggcgaccactgccgcccctgcccttgccccgacggccctgagagtgga
cgccagtttgccagcggctgttaccaggatccggtcactctgcaagtcatgtgtgtctgt
agcacaggatatataggcagtcgatgtgatgaatgtgcgtctggcttcttcggcagcccc
gacgaggtcggcggcgcctgccagccctgccagtgcaacaacaacatcgacaccactgac
ccggaggcctgcgacaaaaggacggggacgtgcgttaagtgcctgtaccacacggagggc
gaaaactgccagctctgcaaggagggctactatgggagtgcgctgcagcaggactgcaga
aagtgtgtctgcaactacctgggcaccgtgcgggaggactgcgacagcgcggagagctgc
cgctgcgaggcggccacggggcagtgccgctgcctgcccggcgtggtggggcagacctgc
gaccgctgcgcgccccacacctggaggctggcgagcggcaccggctgcgagccctgcgac
tgcgacaccacccgctccctcgggctggcctgcaacgagttcacagggcagtgccattgc
atgccgggcttcggaggccggacctgccgggagtgccaagagctcttctggggagacccg
ggcgtggagtgccgagcgtgcgactgcaacccccgtggcatccagaccccgcagtgcgat
cgcgccaccgggcagtgcatctgcaacgagggggtggaagggccgcgctgcgacaagtgc
tcccggggctactcgggcttcttccccgactgcgtgccctgccaccagtgcttcgccctc
tgggacgtggtcatcagcgagctggctaataggacccagcagttcctggaccgggctaac
gccctgaaaatcactggggtcactgggccgtaccagcagacgctcagcaccctggaggag
aagctcggggaaattaaaaccatcattgctcagaacccagccgccgagcccctgaagaac
atcgggaatctctttgaggaagcagaaaagctgacagcagatgttacggttaagatagct
gacttagaagaaaacctatcaaccttagcagagaagagcaacagcacagacagtgacctg
agcgcgctggagacagatgccaaaagcctagaccgtgtcgtgaaagagcttgcagaacag
ctagagttcatcaagatctctgatgttcggggggccttggacagtatcaccaagtatttc
cagatgtccctggaggcagaggaaagggtcaatgcttccactgtccaccccgatagtgcc
gtggagctgtcagcacaaacgcggcaggaagtggaagacttaatcgacgagaaggaggcc
cagttcaaggctaagcaagaggagcagtctcgcctcctggatgaactcgcaggcaaactg
caaagcctggatcttgctgaagtgtcagcaaagacgtgtggcacccccgcaggagcctct
tgtgctgagtccgagtgcggcggcttgaactgccgaaccgatgatgggcagaagaagtgc
ggaggacctggctgcgaggggctggtaaccgtggcgcacaacgcctggcagaaagccatg
gatttcgaccgagacattctcagcgccttagcagaagttgagcaactctccagaatggtt
tctgaagcaaaacagagagctgacgaagccaaacaaaatgcacaagaagttttgctcaaa
accaatgctacaaaagagcaagtggacagaagcaatgaagatctgagaaatctcattaaa
cagatcagagacttcctaatgcaagacagtgctgacctggacagcatcgaggcagtggct
aatgaagtactcaacatggagatgccaagcactccccagcagctacaagccctgacagag
gatatccgtgagcgtgtggaaagcctttctgatgttgaagtcatcctacagcagagcgct
ggagacattgccagagcagaaatgctgctggaggaagctaaaaaagcaagcaaaggcgca
acagatgttaaagtcactgcagacatggtgaaagcagcactagaagaagctgaaaaggca
caaaatgcagctgaaaaagccataaaacaagctgatgaagatattaaaggaactcaagac
ctgctgacctcaattgaatctgaaaatgcagcatctgaagaaacactgaacaacgccact
ttacgtctgtttgagctagagaggagcgttgaagatctcaagcaaaaggctgctacaaat
tcagagaatgtggacaagatagaagaaaaagctggcactgcaaaacaaaatgccgaagaa
gttaagcaggtcctcaacaccgagctgaacagcaagtacaaaacggtggaagatctcatt
gccaagaagacagaggagtcggccgacgctaggaggaaagctggcatgttgcaagatgaa
gctaaagccctgttggctcaagcaaacagcaaactccagctgctcaaagacttggaaaat
acatacgaaaacaatcaaaaagttctcgaagacaaagccaagcagctggtggagctggaa
gagacagttcgctccctcttacagacaatcagccagaaagttgctgtttatagcacttgc
ttataa
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