Cygnus atratus (black swan): 118249618
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Entry
118249618 CDS
T09349
Symbol
NFATC1
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear factor of activated T-cells, cytoplasmic 1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04010
MAPK signaling pathway
cata04020
Calcium signaling pathway
cata04148
Efferocytosis
cata04218
Cellular senescence
cata04310
Wnt signaling pathway
cata04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118249618 (NFATC1)
04310 Wnt signaling pathway
118249618 (NFATC1)
04020 Calcium signaling pathway
118249618 (NFATC1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118249618 (NFATC1)
09143 Cell growth and death
04218 Cellular senescence
118249618 (NFATC1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
118249618 (NFATC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cata03000
]
118249618 (NFATC1)
Transcription factors [BR:
cata03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
118249618 (NFATC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
118249618
NCBI-ProteinID:
XP_050564889
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Position
2:complement(48439059..48559206)
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AA seq
945 aa
AA seq
DB search
MPSAAPPAATAAPPSRDADSGRQEPAAAPQRGARPLGSTMKAAEEEHYNYTSSNVNAGLP
LNVAHSSLSTPCHGLQTSNPVISVVPSTNHPSGYGGHIDSGASEYYLPPNIRPNGAPALE
SPRIEITSYMGLHHNNNQFFHDEVEEAIPNAKRSPSTATLNLPNIEAYRDPSCLSPASSL
SSRSCNSEASSYESNYSYPYTSPQTSPWQSPCVSPKTTDTEEGYQRGMVACTLLNSPRHS
PSTSPRTSITEENWLGARNSRPPSPCNKRKYSLNGRQTSYSPHHSPTPSPQNSPRVSVTD
ETWLGNTNQYTSSAIVAAINALTTDSTIDLNDGIPIKSRKTAIDHTPSMTLKTEPAGEDH
GTISPTADLSPEDFSSFQHIRKGNFCEQYLSVPQHPYQWAKPKSLSPTSYMSPSLPALDW
QLPSHSGPYELRIEVQPKSHHRAHYETEGSRGAVKASAGGHPIVQLHGYLESEPLTLQLF
IGTADDRLLRPHAFYQVHRIXGKTVSTTSHETILSNTKVLEIPLLPENNMRAIIDCAGIL
KLRNSDIELRKGETDIGRKNTRVRLVFRVHIPQSNGRTLSLQVASNPIECSQRSAQELPL
VEKQSTDSFPVIGGKKMILTGHNFLQDSKVIFVEKAPDGHHVWEMEAKTDKEMCKPNSLV
VEIPPFRNQRITSPVQVNFYVCNGKRKRSQYQLFTYLPANVPIIKTEPTDDYEPAQTCGP
MNQGLSPLSKPYYSQQIMMPPDPGSCLVAGFASCQQRNAVMSPSPNASPKLHDLSSSPYK
CIPNPGHGHLGLQQPAGGVPTIQEVPRSIVVHPSSPEQSSHIMLQPQVSQHLSSSCPLGY
QQTLYPNSPSSPVPSVTQEPTYLQSCSPTHSSIMGQQQQQLPKVHRNESPTTQPLSLPEL
HEESNHNLAPIPVTIKREPEELDQMYLDDVNEIIRNDLSSTSVHS
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcgctgccccgccggccgccaccgccgcgccgccgtcgcgggacgcagacagc
gggagacaggagccggcggcggccccgcagcgcggcgcccgcccgctcggcagcaccatg
aaggcggcggaggaagaacactataattatacatcttcaaacgtaaatgctggcttgcct
ctaaatgtggcacattcctcattgtcaactccatgtcatggccttcagacatcaaatccc
gtcatttcagttgtcccatcaacaaatcacccttctggatatggaggacacattgacagt
ggggcatccgagtattacctgcctccaaacatcagacctaatggagctccagcactggag
agccctagaattgagatcacctcttacatgggacttcatcataacaacaaccagtttttt
catgatgaggttgaggaggccatcccaaatgcaaagcgatcaccttccactgccactttg
aacttaccgaacatcgaggcgtacagagacccgtcctgcctgagtccagctagtagcttg
tcttccagaagctgcaactctgaagcgtcttcctacgagtccaactactcgtacccatac
acttcgccccagacctctccgtggcagtccccgtgtgtctctccaaagaccactgacaca
gaggaaggctaccagcgtggcatggtggcctgcactttgctcaattcgccaaggcactct
ccgtcgacatctcccaggacgagcatcacagaggagaactggctgggggcccgcaactcc
aggcctccatctccctgcaacaagagaaagtacagcctcaatggccggcagacttcctac
tcgccacaccactccccaacaccttcaccacaaaactcgccgcgggtgagcgtcacagac
gagacgtggctggggaacaccaaccagtacaccagctctgccattgtcgctgccatcaat
gctctcaccactgacagcacgatagatctgaatgatgggattcccatcaagtcaaggaag
accgccatcgaccacaccccatccatgactctcaaaacggaaccggctggcgaggatcat
gggaccatatcgccgactgccgatttgtcaccagaagacttctccagctttcagcatatc
aggaaaggaaacttctgtgagcagtacctgtctgtgccacagcatccataccagtgggcc
aaaccaaagtctctgtctcctacatcctacatgagcccatccctgcctgcccttgattgg
cagctgccgtctcattcgggaccttatgaactgcgtattgaagtgcagccgaaatcccac
caccgagctcattacgagacagaaggcagccgaggggctgtgaaggcatctgctgggggc
cacccaattgtgcagctacatggttacttagaaagcgagccgctcacgctacagctgttc
attgggactgcagacgaccgcctgctgcgaccccatgctttctaccaagttcaccgaatc
nacgggaagaccgtttccaccaccagccacgaaacaatactttcaaacaccaaagtcttg
gaaattccacttcttccagagaacaacatgagagcaatcatcgactgtgctggaatatta
aagctcagaaactctgacattgagctgcggaagggagaaacagacattgggcggaagaac
acacgcgtgcggttggtcttccgagttcacatcccgcagtccaatgggaggaccctctct
ctgcaagtagcttccaaccccatcgagtgctctcagagatctgcccaagaactgcctctg
gtggagaagcaaagcaccgacagctttcctgttattggagggaaaaaaatgatcctgacc
ggccataactttctgcaagactccaaagtcatctttgtggagaaagcaccagatggtcac
catgtgtgggaaatggaagccaaaactgacaaagaaatgtgcaagccaaattcgttggtg
gttgagataccacctttccgcaatcagagaattaccagccctgttcaggtcaacttttat
gtctgcaacggaaagagaaagagaagccagtaccagcttttcacctatcttccagctaat
gttccaattataaaaacagaacccacagatgactatgagcctgctcaaacctgtggacca
atgaaccaaggcttaagccctctctctaaaccatactacagccagcagatcatgatgccc
ccggatcctggttcatgccttgtggctggcttcgcctcctgtcagcagagaaatgcagtg
atgtcaccctctcccaacgcaagccccaagctgcacgacctttcatcctctccttataag
tgcatccccaacccaggccacggtcacctcggacttcagcagcccgctggaggtgtcccc
accatacaggaagtgccaaggtctatagttgtgcacccaagctcccccgagcaatcatct
cacatcatgctgcagccgcaggtgagtcaacatctgagcagtagctgtccccttggttat
caacaaacactctatcccaacagtccctcttctccagttccatctgttacccaagagcca
acctatttgcagtcctgcagtccaactcactcatccataatgggtcaacagcagcagcaa
ctgccgaaggttcacagaaatgagtctccaacaacccaaccactgtcattgccagagttg
catgaggaaagtaatcataatttggcccctattcctgtaacgatcaagcgagaacctgag
gaattggaccagatgtacctggatgatgtaaatgaaattataaggaatgacctttccagt
accagtgtccattcatag
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